RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 TRIM31Q9BZY9 425 aa13.71□□□□□ -0.21
FOXN3-219ENST00000615335 PDZD7Q9H5P4 517 aa13.71□□□□□ -0.21
FOXN3-219ENST00000615335 KIAA1586Q9HCI6 787 aa13.71□□□□□ -0.21
FOXN3-219ENST00000615335 TAS2R14Q9NYV8 317 aa13.71□□□□□ -0.21
FOXN3-219ENST00000615335 PIN4Q9Y237 131 aaKnown RBP13.71□□□□□ -0.21
FOXN3-219ENST00000615335 ARL2BPQ9Y2Y0 163 aa13.71□□□□□ -0.21
FOXN3-219ENST00000615335 NR2E1Q9Y466 385 aa13.71□□□□□ -0.21
FOXN3-219ENST00000615335 NUB1Q9Y5A7 615 aa13.71□□□□□ -0.21
FOXN3-219ENST00000615335 DCDC2CA8MYV0 355 aa13.71□□□□□ -0.22
FOXN3-219ENST00000615335 GJB6O95452 261 aa13.71□□□□□ -0.22
FOXN3-219ENST00000615335 COL6A1P12109 1028 aa13.71□□□□□ -0.22
FOXN3-219ENST00000615335 RFX1P22670 979 aa13.71□□□□□ -0.22
FOXN3-219ENST00000615335 HOXA11P31270 313 aaPredicted RBP13.71□□□□□ -0.22
FOXN3-219ENST00000615335 PTDSS1P48651 473 aaKnown RBP13.71□□□□□ -0.22
FOXN3-219ENST00000615335 BPIFB4P59827 614 aa13.71□□□□□ -0.22
FOXN3-219ENST00000615335 OSTNP61366 133 aa13.71□□□□□ -0.22
FOXN3-219ENST00000615335 DR1Q01658 176 aa13.71□□□□□ -0.22
FOXN3-219ENST00000615335 CCDC15Q0P6D6 951 aa13.71□□□□□ -0.22
FOXN3-219ENST00000615335 KPNB1Q14974 876 aaKnown RBP13.71□□□□□ -0.22
FOXN3-219ENST00000615335 CLUL1Q15846 466 aa13.71□□□□□ -0.22
FOXN3-219ENST00000615335 GSTA3Q16772 222 aa13.71□□□□□ -0.22
FOXN3-219ENST00000615335 THNSL1Q8IYQ7 743 aa13.71□□□□□ -0.22
FOXN3-219ENST00000615335 PPP2R3CQ969Q6 453 aa13.71□□□□□ -0.22
FOXN3-219ENST00000615335 PGM2Q96G03 612 aa13.71□□□□□ -0.22
FOXN3-219ENST00000615335 FBXL18Q96ME1 805 aa13.71□□□□□ -0.22
FOXN3-219ENST00000615335 FMO2Q99518 471 aa13.71□□□□□ -0.22
FOXN3-219ENST00000615335 AGPAT1Q99943 283 aa13.71□□□□□ -0.22
FOXN3-219ENST00000615335 ADPGKQ9BRR6 497 aa13.71□□□□□ -0.22
FOXN3-219ENST00000615335 STOML1Q9UBI4 398 aa13.71□□□□□ -0.22
FOXN3-219ENST00000615335 FOXN3O00409 490 aaPredicted RBP13.7□□□□□ -0.22
FOXN3-219ENST00000615335 TLR3O15455 904 aaKnown RBP13.7□□□□□ -0.22
FOXN3-219ENST00000615335 ADRB2P07550 413 aa13.7□□□□□ -0.22
FOXN3-219ENST00000615335 USP46P62068 366 aa13.7□□□□□ -0.22
FOXN3-219ENST00000615335 PHEXP78562 749 aa13.7□□□□□ -0.22
FOXN3-219ENST00000615335 SULT2A1Q06520 285 aa13.7□□□□□ -0.22
FOXN3-219ENST00000615335 MAP7Q14244 749 aa13.7□□□□□ -0.22
FOXN3-219ENST00000615335 CNPY1Q3B7I2 92 aa13.7□□□□□ -0.22
FOXN3-219ENST00000615335 ZBTB41Q5SVQ8 909 aa13.7□□□□□ -0.22
FOXN3-219ENST00000615335 PHLDB3Q6NSJ2 640 aa13.7□□□□□ -0.22
FOXN3-219ENST00000615335 NOTUMQ6P988 496 aa13.7□□□□□ -0.22
FOXN3-219ENST00000615335 ADAT2Q7Z6V5 191 aaKnown RBP13.7□□□□□ -0.22
FOXN3-219ENST00000615335 CCDC127Q96BQ5 260 aa13.7□□□□□ -0.22
FOXN3-219ENST00000615335 SPATA16Q9BXB7 569 aa13.7□□□□□ -0.22
FOXN3-219ENST00000615335 CDT1Q9H211 546 aa13.7□□□□□ -0.22
FOXN3-219ENST00000615335 C11orf49Q9H6J7 331 aa13.7□□□□□ -0.22
FOXN3-219ENST00000615335 ZMYND8Q9ULU4 1186 aaPredicted RBP13.7□□□□□ -0.22
FOXN3-219ENST00000615335 FAM170AA1A519 330 aa13.7□□□□□ -0.22
FOXN3-219ENST00000615335 FAM187AA6NFU0 413 aa13.7□□□□□ -0.22
FOXN3-219ENST00000615335 MAPK13O15264 365 aa13.7□□□□□ -0.22
FOXN3-219ENST00000615335 OGTO15294 1046 aa13.7□□□□□ -0.22
FOXN3-219ENST00000615335 LRRN2O75325 713 aa13.7□□□□□ -0.22
FOXN3-219ENST00000615335 CD4P01730 458 aa13.7□□□□□ -0.22
FOXN3-219ENST00000615335 VHLP40337 213 aa13.7□□□□□ -0.22
FOXN3-219ENST00000615335 VAMP7P51809 220 aa13.7□□□□□ -0.22
FOXN3-219ENST00000615335 ZNF211Q13398 564 aaPredicted RBP13.7□□□□□ -0.22
FOXN3-219ENST00000615335 TRIM60Q495X7 471 aa13.7□□□□□ -0.22
FOXN3-219ENST00000615335 RHOT2Q8IXI1 618 aa13.7□□□□□ -0.22
FOXN3-219ENST00000615335 HIC2Q96JB3 615 aa13.7□□□□□ -0.22
FOXN3-219ENST00000615335 NUDCD1Q96RS6 583 aa13.7□□□□□ -0.22
FOXN3-219ENST00000615335 SELENOSQ9BQE4 189 aa13.7□□□□□ -0.22
FOXN3-219ENST00000615335 STMN4Q9H169 189 aaPredicted RBP13.7□□□□□ -0.22
FOXN3-219ENST00000615335 ST3GAL5Q9UNP4 418 aa13.7□□□□□ -0.22
FOXN3-219ENST00000615335 COG5Q9UP83 839 aa13.7□□□□□ -0.22
FOXN3-219ENST00000615335 ATP8A1Q9Y2Q0 1164 aa13.7□□□□□ -0.22
FOXN3-219ENST00000615335 SMAPO00193 183 aa13.69□□□□□ -0.22
FOXN3-219ENST00000615335 GPR182O15218 404 aa13.69□□□□□ -0.22
FOXN3-219ENST00000615335 UNC5CO95185 931 aa13.69□□□□□ -0.22
FOXN3-219ENST00000615335 MCF2P10911 925 aa13.69□□□□□ -0.22
FOXN3-219ENST00000615335 PAX3P23760 479 aa13.69□□□□□ -0.22
FOXN3-219ENST00000615335 AXLP30530 894 aa13.69□□□□□ -0.22
FOXN3-219ENST00000615335 TNFSF9P41273 254 aa13.69□□□□□ -0.22
FOXN3-219ENST00000615335 DLG4P78352 724 aa13.69□□□□□ -0.22
FOXN3-219ENST00000615335 FAM26DQ5JW98 314 aa13.69□□□□□ -0.22
FOXN3-219ENST00000615335 FBXO47Q5MNV8 452 aa13.69□□□□□ -0.22
FOXN3-219ENST00000615335 DUPD1Q68J44 220 aa13.69□□□□□ -0.22
FOXN3-219ENST00000615335 SLC27A1Q6PCB7 646 aa13.69□□□□□ -0.22
FOXN3-219ENST00000615335 ANKRD33Q7Z3H0 272 aa13.69□□□□□ -0.22
FOXN3-219ENST00000615335 PALB2Q86YC2 1186 aa13.69□□□□□ -0.22
FOXN3-219ENST00000615335 PHC3Q8NDX5 983 aa13.69□□□□□ -0.22
FOXN3-219ENST00000615335 LMO3Q8TAP4 145 aa13.69□□□□□ -0.22
FOXN3-219ENST00000615335 TMEM237Q96Q45 408 aa13.69□□□□□ -0.22
FOXN3-219ENST00000615335 CENPKQ9BS16 269 aa13.69□□□□□ -0.22
FOXN3-219ENST00000615335 ERP44Q9BS26 406 aa13.69□□□□□ -0.22
FOXN3-219ENST00000615335 UBE2TQ9NPD8 197 aaPredicted RBP13.69□□□□□ -0.22
FOXN3-219ENST00000615335 RBAKQ9NYW8 714 aaPredicted RBP13.69□□□□□ -0.22
FOXN3-219ENST00000615335 ATP11BQ9Y2G3 1177 aa13.69□□□□□ -0.22
FOXN3-219ENST00000615335 SH3GLB1Q9Y371 365 aa13.69□□□□□ -0.22
FOXN3-219ENST00000615335 TJP3O95049 919 aa13.69□□□□□ -0.22
FOXN3-219ENST00000615335 DLATP10515 647 aaKnown RBP13.69□□□□□ -0.22
FOXN3-219ENST00000615335 HADHBP55084 474 aaKnown RBP13.69□□□□□ -0.22
FOXN3-219ENST00000615335 OCRLQ01968 901 aa13.69□□□□□ -0.22
FOXN3-219ENST00000615335 PPARDQ03181 441 aa13.69□□□□□ -0.22
FOXN3-219ENST00000615335 TLE2Q04725 743 aa13.69□□□□□ -0.22
FOXN3-219ENST00000615335 CYP24A1Q07973 514 aa13.69□□□□□ -0.22
FOXN3-219ENST00000615335 CETN1Q12798 172 aa13.69□□□□□ -0.22
FOXN3-219ENST00000615335 BFSP2Q13515 415 aa13.69□□□□□ -0.22
FOXN3-219ENST00000615335 DHX34Q14147 1143 aaKnown RBP13.69□□□□□ -0.22
FOXN3-219ENST00000615335 NECAB2Q7Z6G3 386 aa13.69□□□□□ -0.22
FOXN3-219ENST00000615335 USP37Q86T82 979 aa13.69□□□□□ -0.22
FOXN3-219ENST00000615335 IRGQQ8WZA9 623 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms