RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 ANK1P16157 1881 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 SIP14410 1827 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 A0A1W2PQ45 241 aaPredicted RBP3.6□□□□□ -1.83
LIG4-205ENST00000614526 A0A1W2PQY0 241 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 GOLGA6CA6NDK9 693 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 PSTPIP1O43586 416 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 PRPSAP2O60256 369 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 B4GALT3O60512 393 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 BANF1O75531 89 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 GOLGA6DP0CG33 693 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 KCNE1P15382 129 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 PECAM1P16284 738 aaPredicted RBP3.6□□□□□ -1.83
LIG4-205ENST00000614526 SDC4P31431 198 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 OR1G1P47890 313 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 ITGA8P53708 1063 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 GDF10P55107 478 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 OTUD4Q01804 1114 aaKnown RBP3.6□□□□□ -1.83
LIG4-205ENST00000614526 SLC25A11Q02978 314 aaKnown RBP3.6□□□□□ -1.83
LIG4-205ENST00000614526 RNASELQ05823 741 aaKnown RBP3.6□□□□□ -1.83
LIG4-205ENST00000614526 ADCY1Q08828 1119 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 MGAT3Q09327 533 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 CALCOCO2Q13137 446 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 CUL1Q13616 776 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 KRT81Q14533 505 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 HADHQ16836 314 aaKnown RBP3.6□□□□□ -1.83
LIG4-205ENST00000614526 TTMPQ5BVD1 217 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 SDHAF4Q5VUM1 108 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 LHX8Q68G74 356 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 ZDHHC24Q6UX98 284 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 HFE2Q6ZVN8 426 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 DEFB128Q7Z7B8 93 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 KATNAL2Q8IYT4 538 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 RCOR2Q8IZ40 523 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 PYROXD2Q8N2H3 581 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.6□□□□□ -1.83
LIG4-205ENST00000614526 ZNF784Q8NCA9 323 aaPredicted RBP3.6□□□□□ -1.83
LIG4-205ENST00000614526 ACTL9Q8TC94 416 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 EDEM1Q92611 657 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 KHSRPQ92945 711 aaKnown RBP eCLIP3.6□□□□□ -1.83
LIG4-205ENST00000614526 MCRS1Q96EZ8 462 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 DDX23Q9BUQ8 820 aaKnown RBP3.6□□□□□ -1.83
LIG4-205ENST00000614526 PPP1R12CQ9BZL4 782 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 UBXN6Q9BZV1 441 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 UPF3AQ9H1J1 476 aaKnown RBP3.6□□□□□ -1.83
LIG4-205ENST00000614526 DHX35Q9H5Z1 703 aaKnown RBP3.6□□□□□ -1.83
LIG4-205ENST00000614526 LRRC4Q9HBW1 653 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 CRTAC1Q9NQ79 661 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 FAM114A2Q9NRY5 505 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 KRT82Q9NSB4 513 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 GOLGA6AQ9NYA3 693 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 hCG_1818297A0A087WSY0 165 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 C2CD4BA6NLJ0 364 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 DCDC2CA8MYV0 355 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 AP1G2O75843 785 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 TJP3O95049 919 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 CSPG5O95196 566 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 TRUB2O95900 331 aaKnown RBP3.6□□□□□ -1.83
LIG4-205ENST00000614526 USP17L7P0C7H9 530 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 BDNFP23560 247 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 KDELR1P24390 212 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 CDKN2BP42772 138 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 ARSEP51690 589 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 SLC6A3Q01959 620 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 GAD2Q05329 585 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 GPS1Q13098 491 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 KLF1Q13351 362 aaPredicted RBP3.6□□□□□ -1.83
LIG4-205ENST00000614526 NNTQ13423 1086 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 BYSLQ13895 437 aaKnown RBP3.6□□□□□ -1.83
LIG4-205ENST00000614526 DHX34Q14147 1143 aaKnown RBP3.6□□□□□ -1.83
LIG4-205ENST00000614526 SLC29A2Q14542 456 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 P3H1Q32P28 736 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 KRT71Q3SY84 523 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 TFDP3Q5H9I0 405 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 FAXCQ5TGI0 409 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 SYPL2Q5VXT5 272 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 FAM117BQ6P1L5 589 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 OLFML1Q6UWY5 402 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 PAQR9Q6ZVX9 377 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 GPRIN1Q7Z2K8 1008 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 TMC3Q7Z5M5 1100 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 TMCO2Q7Z6W1 182 aaPredicted RBP3.6□□□□□ -1.83
LIG4-205ENST00000614526 HACE1Q8IYU2 909 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 IQCKQ8N0W5 287 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 ANKRD52Q8NB46 1076 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 ATL2Q8NHH9 583 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 GPR152Q8TDT2 470 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 CAVIN3Q969G5 261 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 PCED1BQ96HM7 432 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 RBM41Q96IZ5 413 aaKnown RBP3.6□□□□□ -1.83
LIG4-205ENST00000614526 C9orf72Q96LT7 481 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 PGLYRP2Q96PD5 576 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 SYT15Q9BQS2 421 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 MAK16Q9BXY0 300 aaKnown RBP3.6□□□□□ -1.83
LIG4-205ENST00000614526 LRRC19Q9H756 370 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 ZDHHC18Q9NUE0 388 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 ASNSD1Q9NWL6 643 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 CALCOCO1Q9P1Z2 691 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 DNAJB4Q9UDY4 337 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 PCYOX1Q9UHG3 505 aa3.6□□□□□ -1.83
LIG4-205ENST00000614526 ANAPC5Q9UJX4 755 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms