RNA–Protein interactions for RNA: ENST00000613138.1

CSTF1-208, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 4

Gene CSTF1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-208ENST00000613138 HNRNPABQ99729 332 aaKnown RBP13.42□□□□□ -0.26
CSTF1-208ENST00000613138 ZSWIM1Q9BR11 485 aa13.42□□□□□ -0.26
CSTF1-208ENST00000613138 HPS4Q9NQG7 708 aa13.42□□□□□ -0.26
CSTF1-208ENST00000613138 SMPD4Q9NXE4 827 aa13.42□□□□□ -0.26
CSTF1-208ENST00000613138 UXTQ9UBK9 157 aaPredicted RBP13.42□□□□□ -0.26
CSTF1-208ENST00000613138 AJAP1Q9UKB5 411 aaPredicted RBP13.42□□□□□ -0.26
CSTF1-208ENST00000613138 NDRG2Q9UN36 371 aaKnown RBP13.42□□□□□ -0.26
CSTF1-208ENST00000613138 MYO15AQ9UKN7 3530 aa13.41□□□□□ -0.26
CSTF1-208ENST00000613138 H0Y858 1186 aa13.41□□□□□ -0.26
CSTF1-208ENST00000613138 CYP26A1O43174 497 aa13.41□□□□□ -0.26
CSTF1-208ENST00000613138 AFPP02771 609 aaKnown RBP13.41□□□□□ -0.26
CSTF1-208ENST00000613138 CKMP06732 381 aa13.41□□□□□ -0.26
CSTF1-208ENST00000613138 FAM200BP0CF97 657 aa13.41□□□□□ -0.26
CSTF1-208ENST00000613138 ACO1P21399 889 aaKnown RBP13.41□□□□□ -0.26
CSTF1-208ENST00000613138 YWHAQP27348 245 aa13.41□□□□□ -0.26
CSTF1-208ENST00000613138 HOXC13P31276 330 aa13.41□□□□□ -0.26
CSTF1-208ENST00000613138 NUBP1P53384 320 aa13.41□□□□□ -0.26
CSTF1-208ENST00000613138 MARSP56192 900 aaKnown RBP13.41□□□□□ -0.26
CSTF1-208ENST00000613138 FOXR2Q6PJQ5 311 aa13.41□□□□□ -0.26
CSTF1-208ENST00000613138 TTC30AQ86WT1 665 aa13.41□□□□□ -0.26
CSTF1-208ENST00000613138 YAF2Q8IY57 180 aa13.41□□□□□ -0.26
CSTF1-208ENST00000613138 CCDC105Q8IYK2 499 aa13.41□□□□□ -0.26
CSTF1-208ENST00000613138 MLKLQ8NB16 471 aa13.41□□□□□ -0.26
CSTF1-208ENST00000613138 PJA1Q8NG27 643 aa13.41□□□□□ -0.26
CSTF1-208ENST00000613138 DEPDC1BQ8WUY9 529 aa13.41□□□□□ -0.26
CSTF1-208ENST00000613138 TFAP2BQ92481 460 aa13.41□□□□□ -0.26
CSTF1-208ENST00000613138 NDRG1Q92597 394 aaKnown RBP13.41□□□□□ -0.26
CSTF1-208ENST00000613138 CHFRQ96EP1 664 aa13.41□□□□□ -0.26
CSTF1-208ENST00000613138 TMEM176AQ96HP8 235 aa13.41□□□□□ -0.26
CSTF1-208ENST00000613138 KREMEN1Q96MU8 473 aa13.41□□□□□ -0.26
CSTF1-208ENST00000613138 DDX23Q9BUQ8 820 aaKnown RBP13.41□□□□□ -0.26
CSTF1-208ENST00000613138 INTS2Q9H0H0 1204 aaKnown RBP13.41□□□□□ -0.26
CSTF1-208ENST00000613138 LINC00597Q9H2U6 94 aa13.41□□□□□ -0.26
CSTF1-208ENST00000613138 EBF3Q9H4W6 596 aa13.41□□□□□ -0.26
CSTF1-208ENST00000613138 CCSER2Q9H7U1 834 aa13.41□□□□□ -0.26
CSTF1-208ENST00000613138 CSNK1G1Q9HCP0 422 aa13.41□□□□□ -0.26
CSTF1-208ENST00000613138 LTB4R2Q9NPC1 389 aa13.41□□□□□ -0.26
CSTF1-208ENST00000613138 GKN1Q9NS71 199 aa13.41□□□□□ -0.26
CSTF1-208ENST00000613138 SAMSN1Q9NSI8 373 aaKnown RBP13.41□□□□□ -0.26
CSTF1-208ENST00000613138 TDP1Q9NUW8 608 aa13.41□□□□□ -0.26
CSTF1-208ENST00000613138 OSER1Q9NX31 292 aa13.41□□□□□ -0.26
CSTF1-208ENST00000613138 TRPM5Q9NZQ8 1165 aa13.41□□□□□ -0.26
CSTF1-208ENST00000613138 DLGAP2Q9P1A6 1054 aa13.41□□□□□ -0.26
CSTF1-208ENST00000613138 NUDT5Q9UKK9 219 aa13.41□□□□□ -0.26
CSTF1-208ENST00000613138 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.41□□□□□ -0.26
CSTF1-208ENST00000613138 WNT6Q9Y6F9 365 aa13.41□□□□□ -0.26
CSTF1-208ENST00000613138 PIAS3Q9Y6X2 628 aa13.41□□□□□ -0.26
CSTF1-208ENST00000613138 ATP8B3O60423 1300 aa13.4□□□□□ -0.26
CSTF1-208ENST00000613138 TRAV19A0A0A6YYK7 116 aa13.4□□□□□ -0.26
CSTF1-208ENST00000613138 KANSL1LA0AUZ9 987 aa13.4□□□□□ -0.26
CSTF1-208ENST00000613138 FAM170BA6NMN3 283 aa13.4□□□□□ -0.26
CSTF1-208ENST00000613138 MDM4O15151 490 aa13.4□□□□□ -0.26
CSTF1-208ENST00000613138 CHADO15335 359 aa13.4□□□□□ -0.26
CSTF1-208ENST00000613138 TBX18O95935 607 aa13.4□□□□□ -0.26
CSTF1-208ENST00000613138 HDCP19113 662 aa13.4□□□□□ -0.26
CSTF1-208ENST00000613138 SLC9A1P19634 815 aa13.4□□□□□ -0.26
CSTF1-208ENST00000613138 CLCN5P51795 746 aa13.4□□□□□ -0.26
CSTF1-208ENST00000613138 USP4Q13107 963 aa13.4□□□□□ -0.26
CSTF1-208ENST00000613138 FZD5Q13467 585 aa13.4□□□□□ -0.26
CSTF1-208ENST00000613138 ZNF77Q15935 545 aa13.4□□□□□ -0.26
CSTF1-208ENST00000613138 GOLGA7BQ2TAP0 167 aa13.4□□□□□ -0.26
CSTF1-208ENST00000613138 PHLDB3Q6NSJ2 640 aa13.4□□□□□ -0.26
CSTF1-208ENST00000613138 TMEM270Q6UE05 265 aa13.4□□□□□ -0.26
CSTF1-208ENST00000613138 PPM1KQ8N3J5 372 aa13.4□□□□□ -0.26
CSTF1-208ENST00000613138 CELF5Q8N6W0 485 aaKnown RBP13.4□□□□□ -0.26
CSTF1-208ENST00000613138 EHBP1Q8NDI1 1231 aa13.4□□□□□ -0.26
CSTF1-208ENST00000613138 SH3RF2Q8TEC5 729 aa13.4□□□□□ -0.26
CSTF1-208ENST00000613138 IRF7Q92985 503 aa13.4□□□□□ -0.26
CSTF1-208ENST00000613138 NT5C1BQ96P26 610 aa13.4□□□□□ -0.26
CSTF1-208ENST00000613138 NMUR1Q9HB89 426 aa13.4□□□□□ -0.26
CSTF1-208ENST00000613138 ACP6Q9NPH0 428 aa13.4□□□□□ -0.26
CSTF1-208ENST00000613138 RBM12Q9NTZ6 932 aaKnown RBP13.4□□□□□ -0.26
CSTF1-208ENST00000613138 IL37Q9NZH6 218 aa13.4□□□□□ -0.26
CSTF1-208ENST00000613138 TMEM63CQ9P1W3 806 aa13.4□□□□□ -0.26
CSTF1-208ENST00000613138 PCDHB4Q9Y5E5 795 aa13.4□□□□□ -0.26
CSTF1-208ENST00000613138 ANTXRLA6NF34 631 aa13.39□□□□□ -0.27
CSTF1-208ENST00000613138 COCHO43405 550 aa13.39□□□□□ -0.27
CSTF1-208ENST00000613138 OAS1P00973 400 aaKnown RBP13.39□□□□□ -0.27
CSTF1-208ENST00000613138 USP17L7P0C7H9 530 aa13.39□□□□□ -0.27
CSTF1-208ENST00000613138 CCDC192P0DO97 292 aa13.39□□□□□ -0.27
CSTF1-208ENST00000613138 CD19P15391 556 aa13.39□□□□□ -0.27
CSTF1-208ENST00000613138 BRD2P25440 801 aaKnown RBP13.39□□□□□ -0.27
CSTF1-208ENST00000613138 DDX6P26196 483 aaKnown RBP eCLIP13.39□□□□□ -0.27
CSTF1-208ENST00000613138 WEE1P30291 646 aa13.39□□□□□ -0.27
CSTF1-208ENST00000613138 MTIF2P46199 727 aaKnown RBP13.39□□□□□ -0.27
CSTF1-208ENST00000613138 PFKPQ01813 784 aa13.39□□□□□ -0.27
CSTF1-208ENST00000613138 RBM43Q6ZSC3 357 aaKnown RBP13.39□□□□□ -0.27
CSTF1-208ENST00000613138 ZNF687Q8N1G0 1237 aa13.39□□□□□ -0.27
CSTF1-208ENST00000613138 DTWD2Q8NBA8 298 aa13.39□□□□□ -0.27
CSTF1-208ENST00000613138 UBA3Q8TBC4 463 aa13.39□□□□□ -0.27
CSTF1-208ENST00000613138 DNASE1L2Q92874 299 aa13.39□□□□□ -0.27
CSTF1-208ENST00000613138 FAM83CQ9BQN1 747 aa13.39□□□□□ -0.27
CSTF1-208ENST00000613138 DUSP16Q9BY84 665 aa13.39□□□□□ -0.27
CSTF1-208ENST00000613138 IRF2BPLQ9H1B7 796 aa13.39□□□□□ -0.27
CSTF1-208ENST00000613138 SIT1Q9Y3P8 196 aa13.39□□□□□ -0.27
CSTF1-208ENST00000613138 CPQQ9Y646 472 aa13.39□□□□□ -0.27
CSTF1-208ENST00000613138 MYO18AQ92614 2054 aaKnown RBP13.38□□□□□ -0.27
CSTF1-208ENST00000613138 A0A1W2PQH9 124 aa13.38□□□□□ -0.27
CSTF1-208ENST00000613138 LEFTY2O00292 366 aa13.38□□□□□ -0.27
CSTF1-208ENST00000613138 PIK3R2O00459 728 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms