RNA–Protein interactions for RNA: ENST00000612497.1

SSX3-204, Transcript of SSX family member 3, humanhuman

TSL 5 BASIC

Gene SSX3, Length 1,030 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-204ENST00000612497 ADH1CP00326 375 aa11.05□□□□□ -0.64
SSX3-204ENST00000612497 NFICP08651 508 aa11.05□□□□□ -0.64
SSX3-204ENST00000612497 OR52Z1P0C646 297 aa11.05□□□□□ -0.64
SSX3-204ENST00000612497 ZNF883P0CG24 379 aa11.05□□□□□ -0.64
SSX3-204ENST00000612497 MATKP42679 507 aa11.05□□□□□ -0.64
SSX3-204ENST00000612497 SMTNP53814 917 aa11.05□□□□□ -0.64
SSX3-204ENST00000612497 ZXDBP98169 803 aa11.05□□□□□ -0.64
SSX3-204ENST00000612497 SMAD1Q15797 465 aaKnown RBP11.05□□□□□ -0.64
SSX3-204ENST00000612497 KYAT1Q16773 422 aa11.05□□□□□ -0.64
SSX3-204ENST00000612497 RHBDF2Q6PJF5 856 aa11.05□□□□□ -0.64
SSX3-204ENST00000612497 ZCCHC9Q8N567 271 aaKnown RBP11.05□□□□□ -0.64
SSX3-204ENST00000612497 NXPE2Q96DL1 559 aa11.05□□□□□ -0.64
SSX3-204ENST00000612497 ARID3AQ99856 593 aa11.05□□□□□ -0.64
SSX3-204ENST00000612497 NTPCRQ9BSD7 190 aaKnown RBP11.05□□□□□ -0.64
SSX3-204ENST00000612497 RUSC1Q9BVN2 902 aa11.05□□□□□ -0.64
SSX3-204ENST00000612497 MIR1-1HGQ9H1L0 117 aa11.05□□□□□ -0.64
SSX3-204ENST00000612497 ZSWIM6Q9HCJ5 1215 aa11.05□□□□□ -0.64
SSX3-204ENST00000612497 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.05□□□□□ -0.64
SSX3-204ENST00000612497 UNC79Q9P2D8 2635 aa11.05□□□□□ -0.64
SSX3-204ENST00000612497 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.04□□□□□ -0.64
SSX3-204ENST00000612497 MAPTP10636 758 aaKnown RBP11.04□□□□□ -0.64
SSX3-204ENST00000612497 ADH5P11766 374 aa11.04□□□□□ -0.64
SSX3-204ENST00000612497 NDUFV2P19404 249 aa11.04□□□□□ -0.64
SSX3-204ENST00000612497 NTSR1P30989 418 aa11.04□□□□□ -0.64
SSX3-204ENST00000612497 TAF6P49848 677 aa11.04□□□□□ -0.64
SSX3-204ENST00000612497 FOSBP53539 338 aa11.04□□□□□ -0.64
SSX3-204ENST00000612497 MAPK7Q13164 816 aa11.04□□□□□ -0.64
SSX3-204ENST00000612497 TMEM132DQ14C87 1099 aa11.04□□□□□ -0.64
SSX3-204ENST00000612497 SUZ12Q15022 739 aaKnown RBP11.04□□□□□ -0.64
SSX3-204ENST00000612497 HLA-BQ31612 363 aa11.04□□□□□ -0.64
SSX3-204ENST00000612497 TAF1BQ53T94 588 aaPredicted RBP11.04□□□□□ -0.64
SSX3-204ENST00000612497 IL27RAQ6UWB1 636 aa11.04□□□□□ -0.64
SSX3-204ENST00000612497 DHRS13Q6UX07 377 aa11.04□□□□□ -0.64
SSX3-204ENST00000612497 SCN4BQ8IWT1 228 aa11.04□□□□□ -0.64
SSX3-204ENST00000612497 DIS3L2Q8IYB7 885 aaKnown RBP11.04□□□□□ -0.64
SSX3-204ENST00000612497 NAT16Q8N8M0 369 aa11.04□□□□□ -0.64
SSX3-204ENST00000612497 TMEM161BQ8NDZ6 487 aa11.04□□□□□ -0.64
SSX3-204ENST00000612497 KCNV2Q8TDN2 545 aa11.04□□□□□ -0.64
SSX3-204ENST00000612497 BAP1Q92560 729 aa11.04□□□□□ -0.64
SSX3-204ENST00000612497 ABCB6Q9NP58 842 aa11.04□□□□□ -0.64
SSX3-204ENST00000612497 CD93Q9NPY3 652 aa11.04□□□□□ -0.64
SSX3-204ENST00000612497 SMPD4Q9NXE4 827 aa11.04□□□□□ -0.64
SSX3-204ENST00000612497 DNM3Q9UQ16 869 aa11.04□□□□□ -0.64
SSX3-204ENST00000612497 PCDHGB2Q9Y5G2 931 aa11.04□□□□□ -0.64
SSX3-204ENST00000612497 AK5Q9Y6K8 562 aa11.04□□□□□ -0.64
SSX3-204ENST00000612497 COL12A1Q99715 3063 aa11.04□□□□□ -0.64
SSX3-204ENST00000612497 A0A1W2PQF6 199 aa11.03□□□□□ -0.64
SSX3-204ENST00000612497 E9PMD0 336 aa11.03□□□□□ -0.64
SSX3-204ENST00000612497 OGTO15294 1046 aa11.03□□□□□ -0.64
SSX3-204ENST00000612497 TNFSF14O43557 240 aa11.03□□□□□ -0.64
SSX3-204ENST00000612497 TLX3O43711 291 aaPredicted RBP11.03□□□□□ -0.64
SSX3-204ENST00000612497 ADRB2P07550 413 aa11.03□□□□□ -0.64
SSX3-204ENST00000612497 LIG4P49917 911 aa11.03□□□□□ -0.64
SSX3-204ENST00000612497 RAD51AP2Q09MP3 1159 aa11.03□□□□□ -0.64
SSX3-204ENST00000612497 C10orf76Q5T2E6 689 aa11.03□□□□□ -0.64
SSX3-204ENST00000612497 BTBD8Q5XKL5 378 aa11.03□□□□□ -0.64
SSX3-204ENST00000612497 SDE2Q6IQ49 451 aa11.03□□□□□ -0.64
SSX3-204ENST00000612497 RINT1Q6NUQ1 792 aa11.03□□□□□ -0.64
SSX3-204ENST00000612497 PCSK4Q6UW60 755 aa11.03□□□□□ -0.64
SSX3-204ENST00000612497 KIAA1324Q6UXG2 1013 aaKnown RBP11.03□□□□□ -0.64
SSX3-204ENST00000612497 DBX2Q6ZNG2 339 aa11.03□□□□□ -0.64
SSX3-204ENST00000612497 NUDT18Q6ZVK8 323 aa11.03□□□□□ -0.64
SSX3-204ENST00000612497 TMPRSS12Q86WS5 348 aa11.03□□□□□ -0.64
SSX3-204ENST00000612497 CD302Q8IX05 232 aa11.03□□□□□ -0.64
SSX3-204ENST00000612497 PHTF2Q8N3S3 785 aa11.03□□□□□ -0.64
SSX3-204ENST00000612497 FAM181AQ8N9Y4 354 aa11.03□□□□□ -0.64
SSX3-204ENST00000612497 IPO4Q8TEX9 1081 aaKnown RBP11.03□□□□□ -0.64
SSX3-204ENST00000612497 LEO1Q8WVC0 666 aaPredicted RBP11.03□□□□□ -0.64
SSX3-204ENST00000612497 SPIRE2Q8WWL2 714 aa11.03□□□□□ -0.64
SSX3-204ENST00000612497 DNASE2BQ8WZ79 361 aa11.03□□□□□ -0.64
SSX3-204ENST00000612497 CFAP97Q9P2B7 532 aa11.03□□□□□ -0.64
SSX3-204ENST00000612497 KCNG1Q9UIX4 513 aa11.03□□□□□ -0.64
SSX3-204ENST00000612497 DNMT3LQ9UJW3 386 aa11.03□□□□□ -0.64
SSX3-204ENST00000612497 BTBD3Q9Y2F9 522 aa11.03□□□□□ -0.64
SSX3-204ENST00000612497 TMEM131Q92545 1883 aa11.02□□□□□ -0.64
SSX3-204ENST00000612497 MYLKQ15746 1914 aa11.02□□□□□ -0.65
SSX3-204ENST00000612497 KPNA7A9QM74 516 aa11.02□□□□□ -0.65
SSX3-204ENST00000612497 BCAT2O15382 392 aaPredicted RBP11.02□□□□□ -0.65
SSX3-204ENST00000612497 CTDNEP1O95476 244 aa11.02□□□□□ -0.65
SSX3-204ENST00000612497 ABL1P00519 1130 aa11.02□□□□□ -0.65
SSX3-204ENST00000612497 PLS3P13797 630 aa11.02□□□□□ -0.65
SSX3-204ENST00000612497 JUPP14923 745 aa11.02□□□□□ -0.65
SSX3-204ENST00000612497 PFKLP17858 780 aa11.02□□□□□ -0.65
SSX3-204ENST00000612497 ACAT1P24752 427 aaKnown RBP11.02□□□□□ -0.65
SSX3-204ENST00000612497 CD6P30203 668 aa11.02□□□□□ -0.65
SSX3-204ENST00000612497 CXADRP78310 365 aa11.02□□□□□ -0.65
SSX3-204ENST00000612497 GAD2Q05329 585 aa11.02□□□□□ -0.65
SSX3-204ENST00000612497 PDIA5Q14554 519 aa11.02□□□□□ -0.65
SSX3-204ENST00000612497 ZNF174Q15697 407 aa11.02□□□□□ -0.65
SSX3-204ENST00000612497 SV2CQ496J9 727 aa11.02□□□□□ -0.65
SSX3-204ENST00000612497 PREPLQ4J6C6 727 aaPredicted RBP11.02□□□□□ -0.65
SSX3-204ENST00000612497 LY6G5CQ5SRR4 150 aa11.02□□□□□ -0.65
SSX3-204ENST00000612497 C6orf118Q5T5N4 469 aa11.02□□□□□ -0.65
SSX3-204ENST00000612497 C1orf186Q6ZWK4 172 aa11.02□□□□□ -0.65
SSX3-204ENST00000612497 MIB1Q86YT6 1006 aa11.02□□□□□ -0.65
SSX3-204ENST00000612497 SPATA2LQ8IUW3 424 aaPredicted RBP11.02□□□□□ -0.65
SSX3-204ENST00000612497 CHPFQ8IZ52 775 aa11.02□□□□□ -0.65
SSX3-204ENST00000612497 KIAA1958Q8N8K9 716 aa11.02□□□□□ -0.65
SSX3-204ENST00000612497 ENGASEQ8NFI3 743 aa11.02□□□□□ -0.65
SSX3-204ENST00000612497 SNX29Q8TEQ0 813 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms