RNA–Protein interactions for RNA: ENST00000612195.4

TVP23A-210, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TVP23A, Length 1,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-210ENST00000612195 ZSCAN16Q9H4T2 348 aaPredicted RBP17.84■□□□□ 0.45
TVP23A-210ENST00000612195 AGPAT3Q9NRZ7 376 aa17.84■□□□□ 0.45
TVP23A-210ENST00000612195 TMEM30AQ9NV96 361 aa17.84■□□□□ 0.45
TVP23A-210ENST00000612195 CPQQ9Y646 472 aa17.84■□□□□ 0.45
TVP23A-210ENST00000612195 C4orf47A7E2U8 309 aa17.83■□□□□ 0.44
TVP23A-210ENST00000612195 CLIC2O15247 247 aa17.83■□□□□ 0.44
TVP23A-210ENST00000612195 TGFB1I1O43294 461 aa17.83■□□□□ 0.44
TVP23A-210ENST00000612195 TACC1O75410 805 aa17.83■□□□□ 0.44
TVP23A-210ENST00000612195 OLFM2O95897 454 aa17.83■□□□□ 0.44
TVP23A-210ENST00000612195 BCKDHBP21953 392 aa17.83■□□□□ 0.44
TVP23A-210ENST00000612195 CYP2J2P51589 502 aa17.83■□□□□ 0.44
TVP23A-210ENST00000612195 ASIC1P78348 528 aa17.83■□□□□ 0.44
TVP23A-210ENST00000612195 SHC2P98077 582 aa17.83■□□□□ 0.44
TVP23A-210ENST00000612195 MESP2Q0VG99 397 aa17.83■□□□□ 0.44
TVP23A-210ENST00000612195 DHCR24Q15392 516 aa17.83■□□□□ 0.44
TVP23A-210ENST00000612195 WDR72Q3MJ13 1102 aa17.83■□□□□ 0.44
TVP23A-210ENST00000612195 TDRD10Q5VZ19 366 aaKnown RBP17.83■□□□□ 0.44
TVP23A-210ENST00000612195 PMS2CLQ68D20 193 aa17.83■□□□□ 0.44
TVP23A-210ENST00000612195 PSAPL1Q6NUJ1 521 aa17.83■□□□□ 0.44
TVP23A-210ENST00000612195 LINC00301Q8NCQ3 95 aa17.83■□□□□ 0.44
TVP23A-210ENST00000612195 CNOT6LQ96LI5 555 aaKnown RBP17.83■□□□□ 0.44
TVP23A-210ENST00000612195 FNBP1Q96RU3 617 aa17.83■□□□□ 0.44
TVP23A-210ENST00000612195 ZNF518BQ9C0D4 1074 aa17.83■□□□□ 0.44
TVP23A-210ENST00000612195 FOXD4L1Q9NU39 408 aa17.83■□□□□ 0.44
TVP23A-210ENST00000612195 CFAP97Q9P2B7 532 aa17.83■□□□□ 0.44
TVP23A-210ENST00000612195 MMP17Q9ULZ9 603 aa17.83■□□□□ 0.44
TVP23A-210ENST00000612195 LNP1A1A4G5 178 aa17.82■□□□□ 0.44
TVP23A-210ENST00000612195 SLC9A3R1O14745 358 aaPredicted RBP17.82■□□□□ 0.44
TVP23A-210ENST00000612195 OAS1P00973 400 aaKnown RBP17.82■□□□□ 0.44
TVP23A-210ENST00000612195 FAM163BP0C2L3 166 aa17.82■□□□□ 0.44
TVP23A-210ENST00000612195 HNRNPLP14866 589 aaKnown RBP eCLIP17.82■□□□□ 0.44
TVP23A-210ENST00000612195 TNNC1P63316 161 aa17.82■□□□□ 0.44
TVP23A-210ENST00000612195 MRPS21P82921 87 aaKnown RBP17.82■□□□□ 0.44
TVP23A-210ENST00000612195 CYP24A1Q07973 514 aa17.82■□□□□ 0.44
TVP23A-210ENST00000612195 IFRD2Q12894 506 aaPredicted RBP17.82■□□□□ 0.44
TVP23A-210ENST00000612195 PSMD6Q15008 389 aa17.82■□□□□ 0.44
TVP23A-210ENST00000612195 CRY1Q16526 586 aa17.82■□□□□ 0.44
TVP23A-210ENST00000612195 FAM26FQ5R3K3 315 aa17.82■□□□□ 0.44
TVP23A-210ENST00000612195 RHBDF2Q6PJF5 856 aa17.82■□□□□ 0.44
TVP23A-210ENST00000612195 TMEM92Q6UXU6 159 aa17.82■□□□□ 0.44
TVP23A-210ENST00000612195 C11orf74Q86VG3 221 aa17.82■□□□□ 0.44
TVP23A-210ENST00000612195 TTC30AQ86WT1 665 aa17.82■□□□□ 0.44
TVP23A-210ENST00000612195 KIAA1958Q8N8K9 716 aa17.82■□□□□ 0.44
TVP23A-210ENST00000612195 MDGA1Q8NFP4 955 aa17.82■□□□□ 0.44
TVP23A-210ENST00000612195 ZNF516Q92618 1163 aa17.82■□□□□ 0.44
TVP23A-210ENST00000612195 DHX58Q96C10 678 aa17.82■□□□□ 0.44
TVP23A-210ENST00000612195 INTS4Q96HW7 963 aaKnown RBP17.82■□□□□ 0.44
TVP23A-210ENST00000612195 SLITRK1Q96PX8 696 aa17.82■□□□□ 0.44
TVP23A-210ENST00000612195 PNKPQ96T60 521 aa17.82■□□□□ 0.44
TVP23A-210ENST00000612195 CGRRF1Q99675 332 aa17.82■□□□□ 0.44
TVP23A-210ENST00000612195 B3GNT5Q9BYG0 378 aa17.82■□□□□ 0.44
TVP23A-210ENST00000612195 ELOVL4Q9GZR5 314 aa17.82■□□□□ 0.44
TVP23A-210ENST00000612195 CUEDC2Q9H467 287 aa17.82■□□□□ 0.44
TVP23A-210ENST00000612195 TFIP11Q9UBB9 837 aaKnown RBP17.82■□□□□ 0.44
TVP23A-210ENST00000612195 AKAP13Q12802 2813 aa17.81■□□□□ 0.44
TVP23A-210ENST00000612195 CLDN5O00501 218 aa17.81■□□□□ 0.44
TVP23A-210ENST00000612195 GIPC1O14908 333 aa17.81■□□□□ 0.44
TVP23A-210ENST00000612195 SPTLC2O15270 562 aa17.81■□□□□ 0.44
TVP23A-210ENST00000612195 STX6O43752 255 aa17.81■□□□□ 0.44
TVP23A-210ENST00000612195 MBL2P11226 248 aaPredicted RBP17.81■□□□□ 0.44
TVP23A-210ENST00000612195 MYL6P60660 151 aa17.81■□□□□ 0.44
TVP23A-210ENST00000612195 AMPD3Q01432 767 aa17.81■□□□□ 0.44
TVP23A-210ENST00000612195 C12orf40Q86WS4 652 aa17.81■□□□□ 0.44
TVP23A-210ENST00000612195 NELFCDQ8IXH7 590 aa17.81■□□□□ 0.44
TVP23A-210ENST00000612195 NUP93Q8N1F7 819 aa17.81■□□□□ 0.44
TVP23A-210ENST00000612195 ALLCQ8N6M5 410 aa17.81■□□□□ 0.44
TVP23A-210ENST00000612195 XXYLT1Q8NBI6 393 aa17.81■□□□□ 0.44
TVP23A-210ENST00000612195 TXNDC5Q8NBS9 432 aaKnown RBP17.81■□□□□ 0.44
TVP23A-210ENST00000612195 SCFD1Q8WVM8 642 aa17.81■□□□□ 0.44
TVP23A-210ENST00000612195 GZF1Q9H116 711 aaPredicted RBP17.81■□□□□ 0.44
TVP23A-210ENST00000612195 NXF1Q9UBU9 619 aaKnown RBP17.81■□□□□ 0.44
TVP23A-210ENST00000612195 GON4LQ3T8J9 2241 aa17.8■□□□□ 0.44
TVP23A-210ENST00000612195 ASPMQ8IZT6 3477 aa17.8■□□□□ 0.44
TVP23A-210ENST00000612195 A8MXQ7 604 aa17.8■□□□□ 0.44
TVP23A-210ENST00000612195 PATE3B3GLJ2 98 aa17.8■□□□□ 0.44
TVP23A-210ENST00000612195 KHNYNO15037 678 aaKnown RBP17.8■□□□□ 0.44
TVP23A-210ENST00000612195 KAT7O95251 611 aa17.8■□□□□ 0.44
TVP23A-210ENST00000612195 CHRM1P11229 460 aaPredicted RBP17.8■□□□□ 0.44
TVP23A-210ENST00000612195 YWHAQP27348 245 aa17.8■□□□□ 0.44
TVP23A-210ENST00000612195 TIE1P35590 1138 aa17.8■□□□□ 0.44
TVP23A-210ENST00000612195 DHPSP49366 369 aaPredicted RBP17.8■□□□□ 0.44
TVP23A-210ENST00000612195 NOVA1P51513 510 aaKnown RBP17.8■□□□□ 0.44
TVP23A-210ENST00000612195 TRPC3Q13507 836 aa17.8■□□□□ 0.44
TVP23A-210ENST00000612195 EMC10Q5UCC4 262 aa17.8■□□□□ 0.44
TVP23A-210ENST00000612195 CNNM4Q6P4Q7 775 aa17.8■□□□□ 0.44
TVP23A-210ENST00000612195 CYP2U1Q7Z449 544 aa17.8■□□□□ 0.44
TVP23A-210ENST00000612195 IQUBQ8NA54 791 aa17.8■□□□□ 0.44
TVP23A-210ENST00000612195 IL17RCQ8NAC3 791 aa17.8■□□□□ 0.44
TVP23A-210ENST00000612195 B3GALNT2Q8NCR0 500 aa17.8■□□□□ 0.44
TVP23A-210ENST00000612195 OLIG1Q8TAK6 271 aa17.8■□□□□ 0.44
TVP23A-210ENST00000612195 C7orf25Q9BPX7 421 aa17.8■□□□□ 0.44
TVP23A-210ENST00000612195 XYLT2Q9H1B5 865 aa17.8■□□□□ 0.44
TVP23A-210ENST00000612195 CHORDC1Q9UHD1 332 aaPredicted RBP17.8■□□□□ 0.44
TVP23A-210ENST00000612195 MYO18AQ92614 2054 aaKnown RBP17.79■□□□□ 0.44
TVP23A-210ENST00000612195 SGK1O00141 431 aa17.79■□□□□ 0.44
TVP23A-210ENST00000612195 PPP6R2O75170 966 aa17.79■□□□□ 0.44
TVP23A-210ENST00000612195 ALDH1A2O94788 518 aa17.79■□□□□ 0.44
TVP23A-210ENST00000612195 KLF8O95600 359 aaPredicted RBP17.79■□□□□ 0.44
TVP23A-210ENST00000612195 STAU1O95793 577 aaKnown RBP17.79■□□□□ 0.44
TVP23A-210ENST00000612195 ADH1CP00326 375 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms