RNA–Protein interactions for RNA: ENST00000606788.5

CTSA-214, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 3,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-214ENST00000606788 PAPSS1O43252 624 aaPredicted RBP16.65■□□□□ 0.26
CTSA-214ENST00000606788 AVILO75366 819 aa16.65■□□□□ 0.26
CTSA-214ENST00000606788 TRUB2O95900 331 aaKnown RBP16.65■□□□□ 0.26
CTSA-214ENST00000606788 SSTR1P30872 391 aa16.65■□□□□ 0.26
CTSA-214ENST00000606788 ATICP31939 592 aa16.65■□□□□ 0.26
CTSA-214ENST00000606788 BBS9Q3SYG4 887 aa16.65■□□□□ 0.26
CTSA-214ENST00000606788 MSS51Q4VC12 460 aa16.65■□□□□ 0.26
CTSA-214ENST00000606788 C6orf118Q5T5N4 469 aa16.65■□□□□ 0.26
CTSA-214ENST00000606788 DARS2Q6PI48 645 aaKnown RBP16.65■□□□□ 0.26
CTSA-214ENST00000606788 IFNLR1Q8IU57 520 aaPredicted RBP16.65■□□□□ 0.26
CTSA-214ENST00000606788 HMGCRP04035 888 aa16.65■□□□□ 0.26
CTSA-214ENST00000606788 FSCN1Q16658 493 aaKnown RBP16.65■□□□□ 0.26
CTSA-214ENST00000606788 CCDC14Q49A88 953 aa16.65■□□□□ 0.26
CTSA-214ENST00000606788 CYP3A43Q9HB55 503 aa16.65■□□□□ 0.26
CTSA-214ENST00000606788 MFHAS1Q9Y4C4 1052 aa16.65■□□□□ 0.26
CTSA-214ENST00000606788 COL1A2P08123 1366 aa16.64■□□□□ 0.26
CTSA-214ENST00000606788 RRN3P2A6NIE6 340 aa16.64■□□□□ 0.25
CTSA-214ENST00000606788 KRT7P08729 469 aa16.64■□□□□ 0.25
CTSA-214ENST00000606788 GNL1P36915 607 aaPredicted RBP16.64■□□□□ 0.25
CTSA-214ENST00000606788 PITX1P78337 314 aaPredicted RBP16.64■□□□□ 0.25
CTSA-214ENST00000606788 ZNF268Q14587 947 aaPredicted RBP16.64■□□□□ 0.25
CTSA-214ENST00000606788 OASLQ15646 514 aaKnown RBP16.64■□□□□ 0.25
CTSA-214ENST00000606788 FBXO47Q5MNV8 452 aa16.64■□□□□ 0.25
CTSA-214ENST00000606788 ADAM32Q8TC27 787 aa16.64■□□□□ 0.25
CTSA-214ENST00000606788 XPO6Q96QU8 1125 aaKnown RBP16.64■□□□□ 0.25
CTSA-214ENST00000606788 KLF6Q99612 283 aaPredicted RBP16.64■□□□□ 0.25
CTSA-214ENST00000606788 IPPQ9Y573 584 aa16.64■□□□□ 0.25
CTSA-214ENST00000606788 MYO18AQ92614 2054 aaKnown RBP16.64■□□□□ 0.25
CTSA-214ENST00000606788 TMEM120BA0PK00 339 aa16.64■□□□□ 0.25
CTSA-214ENST00000606788 DNALI1O14645 258 aaPredicted RBP16.64■□□□□ 0.25
CTSA-214ENST00000606788 POU5F1BQ06416 359 aa16.64■□□□□ 0.25
CTSA-214ENST00000606788 CRHR2Q13324 411 aa16.64■□□□□ 0.25
CTSA-214ENST00000606788 HIBCHQ6NVY1 386 aaPredicted RBP16.64■□□□□ 0.25
CTSA-214ENST00000606788 LCLAT1Q6UWP7 414 aa16.64■□□□□ 0.25
CTSA-214ENST00000606788 C4orf33Q8N1A6 199 aa16.64■□□□□ 0.25
CTSA-214ENST00000606788 PYROXD2Q8N2H3 581 aa16.64■□□□□ 0.25
CTSA-214ENST00000606788 SLCO2A1Q92959 643 aa16.64■□□□□ 0.25
CTSA-214ENST00000606788 MCRS1Q96EZ8 462 aa16.64■□□□□ 0.25
CTSA-214ENST00000606788 ASNSD1Q9NWL6 643 aa16.64■□□□□ 0.25
CTSA-214ENST00000606788 PIH1D1Q9NWS0 290 aaKnown RBP16.64■□□□□ 0.25
CTSA-214ENST00000606788 DDX56Q9NY93 547 aaKnown RBP16.64■□□□□ 0.25
CTSA-214ENST00000606788 TPX2Q9ULW0 747 aaKnown RBP16.64■□□□□ 0.25
CTSA-214ENST00000606788 EXOC1LA0A1B0GW35 172 aa16.64■□□□□ 0.25
CTSA-214ENST00000606788 C2CD4BA6NLJ0 364 aa16.64■□□□□ 0.25
CTSA-214ENST00000606788 KPNA7A9QM74 516 aa16.64■□□□□ 0.25
CTSA-214ENST00000606788 GBP1P32455 592 aa16.64■□□□□ 0.25
CTSA-214ENST00000606788 RPL22P35268 128 aaKnown RBP16.64■□□□□ 0.25
CTSA-214ENST00000606788 MPP2Q14168 576 aa16.64■□□□□ 0.25
CTSA-214ENST00000606788 MORN1Q5T089 497 aa16.64■□□□□ 0.25
CTSA-214ENST00000606788 FNBP1LQ5T0N5 605 aa16.64■□□□□ 0.25
CTSA-214ENST00000606788 TRMT10CQ7L0Y3 403 aaKnown RBP16.64■□□□□ 0.25
CTSA-214ENST00000606788 RASAL3Q86YV0 1011 aa16.64■□□□□ 0.25
CTSA-214ENST00000606788 PAAF1Q9BRP4 392 aa16.64■□□□□ 0.25
CTSA-214ENST00000606788 CEP41Q9BYV8 373 aa16.64■□□□□ 0.25
CTSA-214ENST00000606788 TSPYL1Q9H0U9 437 aa16.64■□□□□ 0.25
CTSA-214ENST00000606788 SNX25Q9H3E2 840 aa16.64■□□□□ 0.25
CTSA-214ENST00000606788 C12orf65Q9H3J6 166 aaKnown RBP16.64■□□□□ 0.25
CTSA-214ENST00000606788 DHX35Q9H5Z1 703 aaKnown RBP16.64■□□□□ 0.25
CTSA-214ENST00000606788 HOMER3Q9NSC5 361 aa16.64■□□□□ 0.25
CTSA-214ENST00000606788 NAALADL1Q9UQQ1 740 aa16.64■□□□□ 0.25
CTSA-214ENST00000606788 C17orf102A2RUQ5 167 aa16.63■□□□□ 0.25
CTSA-214ENST00000606788 TKTP29401 623 aaKnown RBP16.63■□□□□ 0.25
CTSA-214ENST00000606788 MLH1P40692 756 aa16.63■□□□□ 0.25
CTSA-214ENST00000606788 NDUFV1P49821 464 aa16.63■□□□□ 0.25
CTSA-214ENST00000606788 TAP1Q03518 808 aa16.63■□□□□ 0.25
CTSA-214ENST00000606788 DCAF4L1Q3SXM0 396 aa16.63■□□□□ 0.25
CTSA-214ENST00000606788 FAM131BQ86XD5 332 aa16.63■□□□□ 0.25
CTSA-214ENST00000606788 LRRC34Q8IZ02 419 aa16.63■□□□□ 0.25
CTSA-214ENST00000606788 MICALL1Q8N3F8 863 aa16.63■□□□□ 0.25
CTSA-214ENST00000606788 GAD1Q99259 594 aa16.63■□□□□ 0.25
CTSA-214ENST00000606788 TRIM56Q9BRZ2 755 aaKnown RBP16.63■□□□□ 0.25
CTSA-214ENST00000606788 GOLGA8RI6L899 631 aa16.63■□□□□ 0.25
CTSA-214ENST00000606788 TRAPPC3O43617 180 aa16.63■□□□□ 0.25
CTSA-214ENST00000606788 BEST1O76090 585 aa16.63■□□□□ 0.25
CTSA-214ENST00000606788 BRAFP15056 766 aa16.63■□□□□ 0.25
CTSA-214ENST00000606788 SDC4P31431 198 aa16.63■□□□□ 0.25
CTSA-214ENST00000606788 ZNF143P52747 638 aaPredicted RBP16.63■□□□□ 0.25
CTSA-214ENST00000606788 INCA1Q0VD86 236 aa16.63■□□□□ 0.25
CTSA-214ENST00000606788 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.63■□□□□ 0.25
CTSA-214ENST00000606788 GABRQQ9UN88 632 aa16.63■□□□□ 0.25
CTSA-214ENST00000606788 CASTOR2A6NHX0 329 aa16.62■□□□□ 0.25
CTSA-214ENST00000606788 WSCD1Q658N2 575 aa16.62■□□□□ 0.25
CTSA-214ENST00000606788 TRPV1Q8NER1 839 aa16.62■□□□□ 0.25
CTSA-214ENST00000606788 KBTBD7Q8WVZ9 684 aa16.62■□□□□ 0.25
CTSA-214ENST00000606788 PGM2Q96G03 612 aa16.62■□□□□ 0.25
CTSA-214ENST00000606788 ELAC2Q9BQ52 826 aaKnown RBP16.62■□□□□ 0.25
CTSA-214ENST00000606788 CNPY3Q9BT09 278 aa16.62■□□□□ 0.25
CTSA-214ENST00000606788 DDX20Q9UHI6 824 aaKnown RBP16.62■□□□□ 0.25
CTSA-214ENST00000606788 CHMP2BQ9UQN3 213 aa16.62■□□□□ 0.25
CTSA-214ENST00000606788 SLC45A1Q9Y2W3 748 aa16.62■□□□□ 0.25
CTSA-214ENST00000606788 MCF2LO15068 1137 aa16.62■□□□□ 0.25
CTSA-214ENST00000606788 TMEM63AO94886 807 aa16.62■□□□□ 0.25
CTSA-214ENST00000606788 FAM107AO95990 144 aa16.62■□□□□ 0.25
CTSA-214ENST00000606788 IFRD2Q12894 506 aaPredicted RBP16.62■□□□□ 0.25
CTSA-214ENST00000606788 SPRED3Q2MJR0 410 aa16.62■□□□□ 0.25
CTSA-214ENST00000606788 LRRC38Q5VT99 294 aa16.62■□□□□ 0.25
CTSA-214ENST00000606788 OSTM1Q86WC4 334 aa16.62■□□□□ 0.25
CTSA-214ENST00000606788 SNRNP25Q9BV90 132 aaKnown RBP16.62■□□□□ 0.25
CTSA-214ENST00000606788 RHOBTB2Q9BYZ6 727 aa16.62■□□□□ 0.25
CTSA-214ENST00000606788 ABT1Q9ULW3 272 aaKnown RBP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms