RNA–Protein interactions for RNA: ENST00000606394.5

CTSA-212, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-212ENST00000606394 MBD1Q9UIS9 605 aaPredicted RBP14.3□□□□□ -0.12
CTSA-212ENST00000606394 STYXL1Q9Y6J8 313 aa14.3□□□□□ -0.12
CTSA-212ENST00000606394 ANAPC1Q9H1A4 1944 aa14.3□□□□□ -0.12
CTSA-212ENST00000606394 HELZP42694 1942 aaKnown RBP14.29□□□□□ -0.12
CTSA-212ENST00000606394 HUS1O60921 280 aa14.29□□□□□ -0.12
CTSA-212ENST00000606394 IL18RAPO95256 599 aa14.29□□□□□ -0.12
CTSA-212ENST00000606394 CHRM1P11229 460 aaPredicted RBP14.29□□□□□ -0.12
CTSA-212ENST00000606394 HNRNPLP14866 589 aaKnown RBP eCLIP14.29□□□□□ -0.12
CTSA-212ENST00000606394 ITPKAP23677 461 aa14.29□□□□□ -0.12
CTSA-212ENST00000606394 TNFRSF4P43489 277 aa14.29□□□□□ -0.12
CTSA-212ENST00000606394 ACOT2P49753 483 aa14.29□□□□□ -0.12
CTSA-212ENST00000606394 GTF2BQ00403 316 aa14.29□□□□□ -0.12
CTSA-212ENST00000606394 SDHAF4Q5VUM1 108 aa14.29□□□□□ -0.12
CTSA-212ENST00000606394 ADALQ6DHV7 355 aa14.29□□□□□ -0.12
CTSA-212ENST00000606394 ARMCX6Q7L4S7 300 aa14.29□□□□□ -0.12
CTSA-212ENST00000606394 ADGRG2Q8IZP9 1017 aa14.29□□□□□ -0.12
CTSA-212ENST00000606394 PDCL2Q8N4E4 241 aa14.29□□□□□ -0.12
CTSA-212ENST00000606394 MYCT1Q8N699 235 aa14.29□□□□□ -0.12
CTSA-212ENST00000606394 COL26A1Q96A83 441 aa14.29□□□□□ -0.12
CTSA-212ENST00000606394 CDK5RAP3Q96JB5 506 aa14.29□□□□□ -0.12
CTSA-212ENST00000606394 PNKPQ96T60 521 aa14.29□□□□□ -0.12
CTSA-212ENST00000606394 PKMYT1Q99640 499 aa14.29□□□□□ -0.12
CTSA-212ENST00000606394 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.29□□□□□ -0.12
CTSA-212ENST00000606394 DNAAF2Q9NVR5 837 aaKnown RBP14.29□□□□□ -0.12
CTSA-212ENST00000606394 EHD2Q9NZN4 543 aa14.29□□□□□ -0.12
CTSA-212ENST00000606394 NPHP3-ACAD11A0A0J9YXS1 232 aa14.28□□□□□ -0.12
CTSA-212ENST00000606394 C2orf78A6NCI8 922 aa14.28□□□□□ -0.12
CTSA-212ENST00000606394 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.28□□□□□ -0.12
CTSA-212ENST00000606394 SGK1O00141 431 aa14.28□□□□□ -0.12
CTSA-212ENST00000606394 ARHGAP33O14559 1287 aa14.28□□□□□ -0.12
CTSA-212ENST00000606394 KAT7O95251 611 aa14.28□□□□□ -0.12
CTSA-212ENST00000606394 KLF8O95600 359 aaPredicted RBP14.28□□□□□ -0.12
CTSA-212ENST00000606394 APODP05090 189 aa14.28□□□□□ -0.12
CTSA-212ENST00000606394 CYP17A1P05093 508 aa14.28□□□□□ -0.12
CTSA-212ENST00000606394 SYPP08247 313 aa14.28□□□□□ -0.12
CTSA-212ENST00000606394 PCSK1P29120 753 aa14.28□□□□□ -0.12
CTSA-212ENST00000606394 GRIA2P42262 883 aa14.28□□□□□ -0.12
CTSA-212ENST00000606394 MAGEA11P43364 429 aa14.28□□□□□ -0.12
CTSA-212ENST00000606394 KIR2DL1P43626 348 aaPredicted RBP14.28□□□□□ -0.12
CTSA-212ENST00000606394 PPP3CCP48454 512 aa14.28□□□□□ -0.12
CTSA-212ENST00000606394 SCAPQ12770 1279 aa14.28□□□□□ -0.12
CTSA-212ENST00000606394 TMEM119Q4V9L6 283 aa14.28□□□□□ -0.12
CTSA-212ENST00000606394 ZC2HC1CQ53FD0 456 aaPredicted RBP14.28□□□□□ -0.12
CTSA-212ENST00000606394 HS1BP3Q53T59 392 aa14.28□□□□□ -0.12
CTSA-212ENST00000606394 TRMT11Q7Z4G4 463 aaKnown RBP14.28□□□□□ -0.12
CTSA-212ENST00000606394 SPATA2LQ8IUW3 424 aaPredicted RBP14.28□□□□□ -0.12
CTSA-212ENST00000606394 MINDY1Q8N5J2 469 aa14.28□□□□□ -0.12
CTSA-212ENST00000606394 STKLD1Q8NE28 680 aa14.28□□□□□ -0.12
CTSA-212ENST00000606394 LRRC15Q8TF66 581 aa14.28□□□□□ -0.12
CTSA-212ENST00000606394 HMGB4Q8WW32 186 aa14.28□□□□□ -0.12
CTSA-212ENST00000606394 ADAMTS14Q8WXS8 1223 aa14.28□□□□□ -0.12
CTSA-212ENST00000606394 PDLIM2Q96JY6 352 aa14.28□□□□□ -0.12
CTSA-212ENST00000606394 SPATA17Q96L03 361 aa14.28□□□□□ -0.12
CTSA-212ENST00000606394 REEP2Q9BRK0 252 aa14.28□□□□□ -0.12
CTSA-212ENST00000606394 GTPBP2Q9BX10 602 aaKnown RBP14.28□□□□□ -0.12
CTSA-212ENST00000606394 CLSTN2Q9H4D0 955 aa14.28□□□□□ -0.12
CTSA-212ENST00000606394 DDX43Q9NXZ2 648 aaKnown RBP14.28□□□□□ -0.12
CTSA-212ENST00000606394 RCOR1Q9UKL0 485 aa14.28□□□□□ -0.12
CTSA-212ENST00000606394 GTF3C4Q9UKN8 822 aa14.28□□□□□ -0.12
CTSA-212ENST00000606394 AGO2Q9UKV8 859 aaKnown RBP14.28□□□□□ -0.12
CTSA-212ENST00000606394 PCDH15Q96QU1 1955 aa14.27□□□□□ -0.12
CTSA-212ENST00000606394 LEFTY2O00292 366 aa14.27□□□□□ -0.13
CTSA-212ENST00000606394 FAM13AO94988 1023 aa14.27□□□□□ -0.13
CTSA-212ENST00000606394 ADH1CP00326 375 aa14.27□□□□□ -0.13
CTSA-212ENST00000606394 CD59P13987 128 aa14.27□□□□□ -0.13
CTSA-212ENST00000606394 TIE1P35590 1138 aa14.27□□□□□ -0.13
CTSA-212ENST00000606394 LHX1P48742 406 aa14.27□□□□□ -0.13
CTSA-212ENST00000606394 FAM193AP78312 1265 aa14.27□□□□□ -0.13
CTSA-212ENST00000606394 SLC7A9P82251 487 aa14.27□□□□□ -0.13
CTSA-212ENST00000606394 ATP2C1P98194 919 aaPredicted RBP14.27□□□□□ -0.13
CTSA-212ENST00000606394 DHCR24Q15392 516 aa14.27□□□□□ -0.13
CTSA-212ENST00000606394 TRIP6Q15654 476 aaKnown RBP14.27□□□□□ -0.13
CTSA-212ENST00000606394 PREPLQ4J6C6 727 aaPredicted RBP14.27□□□□□ -0.13
CTSA-212ENST00000606394 RILPL1Q5EBL4 403 aa14.27□□□□□ -0.13
CTSA-212ENST00000606394 VSTM1Q6UX27 236 aa14.27□□□□□ -0.13
CTSA-212ENST00000606394 C4orf50Q6ZRC1 276 aa14.27□□□□□ -0.13
CTSA-212ENST00000606394 LRRC52Q8N7C0 313 aa14.27□□□□□ -0.13
CTSA-212ENST00000606394 FRMD1Q8N878 549 aa14.27□□□□□ -0.13
CTSA-212ENST00000606394 TNMDQ9H2S6 317 aa14.27□□□□□ -0.13
CTSA-212ENST00000606394 ST6GALNAC4Q9H4F1 302 aa14.27□□□□□ -0.13
CTSA-212ENST00000606394 CCDC86Q9H6F5 360 aaKnown RBP14.27□□□□□ -0.13
CTSA-212ENST00000606394 SCUBE2Q9NQ36 999 aa14.27□□□□□ -0.13
CTSA-212ENST00000606394 GDAP2Q9NXN4 497 aa14.27□□□□□ -0.13
CTSA-212ENST00000606394 TRPM5Q9NZQ8 1165 aa14.27□□□□□ -0.13
CTSA-212ENST00000606394 L1RE1Q9UN81 338 aa14.27□□□□□ -0.13
CTSA-212ENST00000606394 MYO18AQ92614 2054 aaKnown RBP14.27□□□□□ -0.13
CTSA-212ENST00000606394 MAST4O15021 2626 aa14.27□□□□□ -0.13
CTSA-212ENST00000606394 ATXN2Q99700 1313 aaKnown RBP14.26□□□□□ -0.13
CTSA-212ENST00000606394 A0A1W2PQD8 194 aa14.26□□□□□ -0.13
CTSA-212ENST00000606394 TCRBV21S2A2A0A5A6 115 aa14.26□□□□□ -0.13
CTSA-212ENST00000606394 ADAM23O75077 832 aa14.26□□□□□ -0.13
CTSA-212ENST00000606394 YEATS4O95619 227 aa14.26□□□□□ -0.13
CTSA-212ENST00000606394 ZXDBP98169 803 aa14.26□□□□□ -0.13
CTSA-212ENST00000606394 RPL6Q02878 288 aaKnown RBP14.26□□□□□ -0.13
CTSA-212ENST00000606394 ZNF33AQ06730 810 aa14.26□□□□□ -0.13
CTSA-212ENST00000606394 POSTNQ15063 836 aa14.26□□□□□ -0.13
CTSA-212ENST00000606394 ARL6IP4Q66PJ3 421 aaKnown RBP14.26□□□□□ -0.13
CTSA-212ENST00000606394 C19orf48Q6RUI8 117 aa14.26□□□□□ -0.13
CTSA-212ENST00000606394 CCNI2Q6ZMN8 369 aaPredicted RBP14.26□□□□□ -0.13
CTSA-212ENST00000606394 CCDC73Q6ZRK6 1079 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms