RNA–Protein interactions for RNA: ENST00000606000.1

CTSA-210, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 644 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-210ENST00000606000 PSMA7O14818 248 aa13.04□□□□□ -0.32
CTSA-210ENST00000606000 CILPO75339 1184 aa13.04□□□□□ -0.32
CTSA-210ENST00000606000 SP9P0CG40 484 aa13.04□□□□□ -0.32
CTSA-210ENST00000606000 CHRNB1P11230 501 aa13.04□□□□□ -0.32
CTSA-210ENST00000606000 HDCP19113 662 aa13.04□□□□□ -0.32
CTSA-210ENST00000606000 HOXC13P31276 330 aa13.04□□□□□ -0.32
CTSA-210ENST00000606000 GTF2H1P32780 548 aa13.04□□□□□ -0.32
CTSA-210ENST00000606000 ANP32AP39687 249 aaKnown RBP13.04□□□□□ -0.32
CTSA-210ENST00000606000 MAP3K7CLP57077 242 aa13.04□□□□□ -0.32
CTSA-210ENST00000606000 MTAPQ13126 283 aa13.04□□□□□ -0.32
CTSA-210ENST00000606000 GAS6Q14393 721 aa13.04□□□□□ -0.32
CTSA-210ENST00000606000 ZNF268Q14587 947 aaPredicted RBP13.04□□□□□ -0.32
CTSA-210ENST00000606000 Q6ZS52 159 aa13.04□□□□□ -0.32
CTSA-210ENST00000606000 UNC93AQ86WB7 457 aa13.04□□□□□ -0.32
CTSA-210ENST00000606000 NUP93Q8N1F7 819 aa13.04□□□□□ -0.32
CTSA-210ENST00000606000 FBXL13Q8NEE6 735 aa13.04□□□□□ -0.32
CTSA-210ENST00000606000 SH3RF2Q8TEC5 729 aa13.04□□□□□ -0.32
CTSA-210ENST00000606000 FBXO32Q969P5 355 aa13.04□□□□□ -0.32
CTSA-210ENST00000606000 SLC35C1Q96A29 364 aa13.04□□□□□ -0.32
CTSA-210ENST00000606000 DHTKD1Q96HY7 919 aaPredicted RBP13.04□□□□□ -0.32
CTSA-210ENST00000606000 IRF2BPLQ9H1B7 796 aa13.04□□□□□ -0.32
CTSA-210ENST00000606000 LMAN1LQ9HAT1 526 aa13.04□□□□□ -0.32
CTSA-210ENST00000606000 THG1LQ9NWX6 298 aaKnown RBP13.04□□□□□ -0.32
CTSA-210ENST00000606000 RAB20Q9NX57 234 aa13.04□□□□□ -0.32
CTSA-210ENST00000606000 SMPD4Q9NXE4 827 aa13.04□□□□□ -0.32
CTSA-210ENST00000606000 TRPM5Q9NZQ8 1165 aa13.04□□□□□ -0.32
CTSA-210ENST00000606000 ZMYM5Q9UJ78 669 aa13.04□□□□□ -0.32
CTSA-210ENST00000606000 MRPS17Q9Y2R5 130 aaKnown RBP13.04□□□□□ -0.32
CTSA-210ENST00000606000 ATP8B3O60423 1300 aa13.04□□□□□ -0.32
CTSA-210ENST00000606000 SOBPA7XYQ1 873 aa13.03□□□□□ -0.32
CTSA-210ENST00000606000 LAMTOR5O43504 91 aa13.03□□□□□ -0.32
CTSA-210ENST00000606000 GFRA3O60609 400 aa13.03□□□□□ -0.32
CTSA-210ENST00000606000 OLFM2O95897 454 aa13.03□□□□□ -0.32
CTSA-210ENST00000606000 OAS1P00973 400 aaKnown RBP13.03□□□□□ -0.32
CTSA-210ENST00000606000 YWHAQP27348 245 aa13.03□□□□□ -0.32
CTSA-210ENST00000606000 RPS9P46781 194 aaKnown RBP13.03□□□□□ -0.32
CTSA-210ENST00000606000 UBE2HP62256 183 aa13.03□□□□□ -0.32
CTSA-210ENST00000606000 PLCB2Q00722 1185 aa13.03□□□□□ -0.32
CTSA-210ENST00000606000 LRMPQ12912 555 aa13.03□□□□□ -0.32
CTSA-210ENST00000606000 STIM1Q13586 685 aa13.03□□□□□ -0.32
CTSA-210ENST00000606000 RUNX3Q13761 415 aa13.03□□□□□ -0.32
CTSA-210ENST00000606000 ITPRIPL2Q3MIP1 535 aa13.03□□□□□ -0.32
CTSA-210ENST00000606000 CLEC20AQ6ZU45 233 aa13.03□□□□□ -0.32
CTSA-210ENST00000606000 CEP295NLQ96MC4 621 aa13.03□□□□□ -0.32
CTSA-210ENST00000606000 NELL2Q99435 816 aa13.03□□□□□ -0.32
CTSA-210ENST00000606000 NT5C1AQ9BXI3 368 aa13.03□□□□□ -0.32
CTSA-210ENST00000606000 CHRDQ9H2X0 955 aa13.03□□□□□ -0.32
CTSA-210ENST00000606000 C8orf33Q9H7E9 229 aaPredicted RBP13.03□□□□□ -0.32
CTSA-210ENST00000606000 CYP3A43Q9HB55 503 aa13.03□□□□□ -0.32
CTSA-210ENST00000606000 CSNK1G1Q9HCP0 422 aa13.03□□□□□ -0.32
CTSA-210ENST00000606000 C2orf42Q9NWW7 574 aa13.03□□□□□ -0.32
CTSA-210ENST00000606000 GMIPQ9P107 970 aa13.03□□□□□ -0.32
CTSA-210ENST00000606000 ARMCX3Q9UH62 379 aaPredicted RBP13.03□□□□□ -0.32
CTSA-210ENST00000606000 CHORDC1Q9UHD1 332 aaPredicted RBP13.03□□□□□ -0.32
CTSA-210ENST00000606000 ARHGAP26Q9UNA1 814 aa13.03□□□□□ -0.32
CTSA-210ENST00000606000 CPQQ9Y646 472 aa13.03□□□□□ -0.32
CTSA-210ENST00000606000 KIAA1549LQ6ZVL6 1849 aa13.03□□□□□ -0.32
CTSA-210ENST00000606000 FANCMQ8IYD8 2048 aa13.02□□□□□ -0.33
CTSA-210ENST00000606000 PRR23AA6NEV1 266 aa13.02□□□□□ -0.33
CTSA-210ENST00000606000 HHLA1C9JL84 531 aa13.02□□□□□ -0.33
CTSA-210ENST00000606000 PROB1E7EW31 1015 aa13.02□□□□□ -0.33
CTSA-210ENST00000606000 LEFTY2O00292 366 aa13.02□□□□□ -0.33
CTSA-210ENST00000606000 NCAM2O15394 837 aa13.02□□□□□ -0.33
CTSA-210ENST00000606000 STX10O60499 249 aa13.02□□□□□ -0.33
CTSA-210ENST00000606000 FAM200BP0CF97 657 aa13.02□□□□□ -0.33
CTSA-210ENST00000606000 CSTF1Q05048 431 aaKnown RBP13.02□□□□□ -0.33
CTSA-210ENST00000606000 CCDC40Q4G0X9 1142 aa13.02□□□□□ -0.33
CTSA-210ENST00000606000 PPP1R26Q5T8A7 1209 aaPredicted RBP13.02□□□□□ -0.33
CTSA-210ENST00000606000 CC2D1AQ6P1N0 951 aaPredicted RBP13.02□□□□□ -0.33
CTSA-210ENST00000606000 RALGPS2Q86X27 583 aaPredicted RBP13.02□□□□□ -0.33
CTSA-210ENST00000606000 CCDC150Q8NCX0 1101 aa13.02□□□□□ -0.33
CTSA-210ENST00000606000 OSCP1Q8WVF1 389 aa13.02□□□□□ -0.33
CTSA-210ENST00000606000 CYFIP2Q96F07 1278 aa13.02□□□□□ -0.33
CTSA-210ENST00000606000 SLITRK1Q96PX8 696 aa13.02□□□□□ -0.33
CTSA-210ENST00000606000 HNRNPABQ99729 332 aaKnown RBP13.02□□□□□ -0.33
CTSA-210ENST00000606000 LINC00597Q9H2U6 94 aa13.02□□□□□ -0.33
CTSA-210ENST00000606000 CCSER2Q9H7U1 834 aa13.02□□□□□ -0.33
CTSA-210ENST00000606000 CISHQ9NSE2 258 aa13.02□□□□□ -0.33
CTSA-210ENST00000606000 DUS2Q9NX74 493 aaKnown RBP13.02□□□□□ -0.33
CTSA-210ENST00000606000 CYP26A1O43174 497 aa13.01□□□□□ -0.33
CTSA-210ENST00000606000 COCHO43405 550 aa13.01□□□□□ -0.33
CTSA-210ENST00000606000 RTN3O95197 1032 aaPredicted RBP13.01□□□□□ -0.33
CTSA-210ENST00000606000 MAGEA9P43362 315 aa13.01□□□□□ -0.33
CTSA-210ENST00000606000 IFNAR2P48551 515 aa13.01□□□□□ -0.33
CTSA-210ENST00000606000 FMO5P49326 533 aa13.01□□□□□ -0.33
CTSA-210ENST00000606000 RAD23BP54727 409 aa13.01□□□□□ -0.33
CTSA-210ENST00000606000 MLLT6P55198 1093 aaPredicted RBP13.01□□□□□ -0.33
CTSA-210ENST00000606000 SLC7A9P82251 487 aa13.01□□□□□ -0.33
CTSA-210ENST00000606000 SATB1Q01826 763 aa13.01□□□□□ -0.33
CTSA-210ENST00000606000 PAK1Q13153 545 aa13.01□□□□□ -0.33
CTSA-210ENST00000606000 EML3Q32P44 896 aa13.01□□□□□ -0.33
CTSA-210ENST00000606000 FSTL4Q6MZW2 842 aa13.01□□□□□ -0.33
CTSA-210ENST00000606000 PKN3Q6P5Z2 889 aa13.01□□□□□ -0.33
CTSA-210ENST00000606000 SLC4A11Q8NBS3 891 aa13.01□□□□□ -0.33
CTSA-210ENST00000606000 WBP2Q969T9 261 aa13.01□□□□□ -0.33
CTSA-210ENST00000606000 MSANTD3Q96H12 275 aa13.01□□□□□ -0.33
CTSA-210ENST00000606000 CEP63Q96MT8 703 aa13.01□□□□□ -0.33
CTSA-210ENST00000606000 MED15Q96RN5 788 aa13.01□□□□□ -0.33
CTSA-210ENST00000606000 ECT2Q9H8V3 914 aa13.01□□□□□ -0.33
CTSA-210ENST00000606000 FBRSL1Q9HCM7 1045 aaKnown RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms