RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 TLX1P31314 330 aaPredicted RBP4.93□□□□□ -1.62
LINC01109-201ENST00000603837 PHBP35232 272 aa4.93□□□□□ -1.62
LINC01109-201ENST00000603837 SOX6P35712 828 aa4.93□□□□□ -1.62
LINC01109-201ENST00000603837 EIF2B2P49770 351 aaKnown RBP4.93□□□□□ -1.62
LINC01109-201ENST00000603837 HSD17B4P51659 736 aa4.93□□□□□ -1.62
LINC01109-201ENST00000603837 CARD18P57730 90 aa4.93□□□□□ -1.62
LINC01109-201ENST00000603837 ZNF280AP59817 542 aaPredicted RBP4.93□□□□□ -1.62
LINC01109-201ENST00000603837 NAA20P61599 178 aa4.93□□□□□ -1.62
LINC01109-201ENST00000603837 RALGDSQ12967 914 aa4.93□□□□□ -1.62
LINC01109-201ENST00000603837 PPP2R5EQ16537 467 aa4.93□□□□□ -1.62
LINC01109-201ENST00000603837 CEP78Q5JTW2 689 aa4.93□□□□□ -1.62
LINC01109-201ENST00000603837 B3GNT6Q6ZMB0 384 aa4.93□□□□□ -1.62
LINC01109-201ENST00000603837 NLRC3Q7RTR2 1065 aa4.93□□□□□ -1.62
LINC01109-201ENST00000603837 PIGWQ7Z7B1 504 aa4.93□□□□□ -1.62
LINC01109-201ENST00000603837 CMIPQ8IY22 773 aa4.93□□□□□ -1.62
LINC01109-201ENST00000603837 MREGQ8N565 214 aa4.93□□□□□ -1.62
LINC01109-201ENST00000603837 CNTD1Q8N815 330 aa4.93□□□□□ -1.62
LINC01109-201ENST00000603837 URGCPQ8TCY9 931 aa4.93□□□□□ -1.62
LINC01109-201ENST00000603837 METTL21AQ8WXB1 218 aa4.93□□□□□ -1.62
LINC01109-201ENST00000603837 AK8Q96MA6 479 aa4.93□□□□□ -1.62
LINC01109-201ENST00000603837 USP28Q96RU2 1077 aa4.93□□□□□ -1.62
LINC01109-201ENST00000603837 BCL7BQ9BQE9 202 aa4.93□□□□□ -1.62
LINC01109-201ENST00000603837 CCDC177Q9NQR7 707 aaPredicted RBP4.93□□□□□ -1.62
LINC01109-201ENST00000603837 ARHGAP28Q9P2N2 729 aa4.93□□□□□ -1.62
LINC01109-201ENST00000603837 STX8Q9UNK0 236 aa4.93□□□□□ -1.62
LINC01109-201ENST00000603837 USP31Q70CQ4 1352 aa4.93□□□□□ -1.62
LINC01109-201ENST00000603837 GOLGB1Q14789 3259 aaKnown RBP4.93□□□□□ -1.62
LINC01109-201ENST00000603837 SMIM31A0A1B0GVY4 71 aa4.93□□□□□ -1.62
LINC01109-201ENST00000603837 C9IYK1 514 aa4.93□□□□□ -1.62
LINC01109-201ENST00000603837 E9PBE3 544 aa4.93□□□□□ -1.62
LINC01109-201ENST00000603837 AREL1O15033 823 aa4.93□□□□□ -1.62
LINC01109-201ENST00000603837 SMAD7O15105 426 aaKnown RBP4.93□□□□□ -1.62
LINC01109-201ENST00000603837 GREM1O60565 184 aa4.93□□□□□ -1.62
LINC01109-201ENST00000603837 DKC1O60832 514 aaKnown RBP eCLIP4.93□□□□□ -1.62
LINC01109-201ENST00000603837 TSPAN9O75954 239 aa4.93□□□□□ -1.62
LINC01109-201ENST00000603837 CKMT1AP12532 417 aa4.93□□□□□ -1.62
LINC01109-201ENST00000603837 HMOX2P30519 316 aa4.93□□□□□ -1.62
LINC01109-201ENST00000603837 HSPA9P38646 679 aaKnown RBP4.93□□□□□ -1.62
LINC01109-201ENST00000603837 RABIFP47224 123 aa4.93□□□□□ -1.62
LINC01109-201ENST00000603837 PCP4P48539 62 aa4.93□□□□□ -1.62
LINC01109-201ENST00000603837 BLVRAP53004 296 aa4.93□□□□□ -1.62
LINC01109-201ENST00000603837 OCRLQ01968 901 aa4.93□□□□□ -1.62
LINC01109-201ENST00000603837 C19orf57Q0VDD7 668 aa4.93□□□□□ -1.62
LINC01109-201ENST00000603837 CDC16Q13042 620 aa4.93□□□□□ -1.62
LINC01109-201ENST00000603837 ITGA9Q13797 1035 aa4.93□□□□□ -1.62
LINC01109-201ENST00000603837 DSC3Q14574 896 aa4.93□□□□□ -1.62
LINC01109-201ENST00000603837 ANO4Q32M45 955 aa4.93□□□□□ -1.62
LINC01109-201ENST00000603837 GALNTL6Q49A17 601 aa4.93□□□□□ -1.62
LINC01109-201ENST00000603837 ZCWPW2Q504Y3 356 aa4.93□□□□□ -1.62
LINC01109-201ENST00000603837 FSCBQ5H9T9 825 aa4.93□□□□□ -1.62
LINC01109-201ENST00000603837 FAM26DQ5JW98 314 aa4.93□□□□□ -1.62
LINC01109-201ENST00000603837 SNRNP48Q6IEG0 339 aaKnown RBP4.93□□□□□ -1.62
LINC01109-201ENST00000603837 LRIG3Q6UXM1 1119 aa4.93□□□□□ -1.62
LINC01109-201ENST00000603837 RFPL4BQ6ZWI9 263 aa4.93□□□□□ -1.62
LINC01109-201ENST00000603837 NUDT13Q86X67 352 aa4.93□□□□□ -1.62
LINC01109-201ENST00000603837 TMTC1Q8IUR5 882 aa4.93□□□□□ -1.62
LINC01109-201ENST00000603837 RHOT2Q8IXI1 618 aa4.93□□□□□ -1.62
LINC01109-201ENST00000603837 ZBED8Q8IZ13 594 aa4.93□□□□□ -1.62
LINC01109-201ENST00000603837 BBS5Q8N3I7 341 aa4.93□□□□□ -1.62
LINC01109-201ENST00000603837 SUPT20HQ8NEM7 779 aa4.93□□□□□ -1.62
LINC01109-201ENST00000603837 ST13P5Q8NFI4 369 aaPredicted RBP4.93□□□□□ -1.62
LINC01109-201ENST00000603837 TOR1AIP2Q8NFQ8 470 aa4.93□□□□□ -1.62
LINC01109-201ENST00000603837 OR7G1Q8NGA0 311 aa4.93□□□□□ -1.62
LINC01109-201ENST00000603837 LRRC8CQ8TDW0 803 aa4.93□□□□□ -1.62
LINC01109-201ENST00000603837 OSCP1Q8WVF1 389 aa4.93□□□□□ -1.62
LINC01109-201ENST00000603837 MED30Q96HR3 178 aa4.93□□□□□ -1.62
LINC01109-201ENST00000603837 RIPOR3Q96MK2 946 aa4.93□□□□□ -1.62
LINC01109-201ENST00000603837 EMILIN2Q9BXX0 1053 aa4.93□□□□□ -1.62
LINC01109-201ENST00000603837 VPS11Q9H270 941 aa4.93□□□□□ -1.62
LINC01109-201ENST00000603837 CAAP1Q9H8G2 361 aa4.93□□□□□ -1.62
LINC01109-201ENST00000603837 PIH1D3Q9NQM4 214 aaKnown RBP4.93□□□□□ -1.62
LINC01109-201ENST00000603837 CNOT8Q9UFF9 292 aaKnown RBP4.93□□□□□ -1.62
LINC01109-201ENST00000603837 RNF112Q9ULX5 631 aa4.93□□□□□ -1.62
LINC01109-201ENST00000603837 SNX6Q9UNH7 406 aa4.93□□□□□ -1.62
LINC01109-201ENST00000603837 NUMBLQ9Y6R0 609 aa4.93□□□□□ -1.62
LINC01109-201ENST00000603837 ABCC12Q96J65 1359 aa4.93□□□□□ -1.62
LINC01109-201ENST00000603837 KIAA1217Q5T5P2 1943 aa4.92□□□□□ -1.62
LINC01109-201ENST00000603837 PCDH11XQ9BZA7 1347 aa4.92□□□□□ -1.62
LINC01109-201ENST00000603837 SYNJ2BP-COX16A0A087WUM0 186 aa4.92□□□□□ -1.62
LINC01109-201ENST00000603837 A0A1W2PPH5 198 aa4.92□□□□□ -1.62
LINC01109-201ENST00000603837 SIGLEC16A6NMB1 481 aa4.92□□□□□ -1.62
LINC01109-201ENST00000603837 NUDT19A8MXV4 375 aa4.92□□□□□ -1.62
LINC01109-201ENST00000603837 TMEM114B3SHH9 223 aa4.92□□□□□ -1.62
LINC01109-201ENST00000603837 ZNF185O15231 689 aa4.92□□□□□ -1.62
LINC01109-201ENST00000603837 MAPK13O15264 365 aa4.92□□□□□ -1.62
LINC01109-201ENST00000603837 TRPA1O75762 1119 aa4.92□□□□□ -1.62
LINC01109-201ENST00000603837 ZKSCAN1P17029 563 aaPredicted RBP4.92□□□□□ -1.62
LINC01109-201ENST00000603837 PTPN2P17706 415 aa4.92□□□□□ -1.62
LINC01109-201ENST00000603837 HIRAP54198 1017 aaPredicted RBP4.92□□□□□ -1.62
LINC01109-201ENST00000603837 CACNB3P54284 484 aa4.92□□□□□ -1.62
LINC01109-201ENST00000603837 CSNK2BP67870 215 aa4.92□□□□□ -1.62
LINC01109-201ENST00000603837 COG7P83436 770 aa4.92□□□□□ -1.62
LINC01109-201ENST00000603837 ZBTB16Q05516 673 aa4.92□□□□□ -1.62
LINC01109-201ENST00000603837 TCEA2Q15560 299 aa4.92□□□□□ -1.62
LINC01109-201ENST00000603837 GEN1Q17RS7 908 aa4.92□□□□□ -1.62
LINC01109-201ENST00000603837 CCDC14Q49A88 953 aa4.92□□□□□ -1.62
LINC01109-201ENST00000603837 EFHC2Q5JST6 749 aa4.92□□□□□ -1.62
LINC01109-201ENST00000603837 BEND3Q5T5X7 828 aa4.92□□□□□ -1.62
LINC01109-201ENST00000603837 ERMARDQ5T6L9 678 aa4.92□□□□□ -1.62
LINC01109-201ENST00000603837 FYB2Q5VWT5 728 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms