RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 RNF168Q8IYW5 571 aaPredicted RBP18.25■□□□□ 0.51
PPFIA3-207ENST00000602716 EMC1Q8N766 993 aa18.25■□□□□ 0.51
PPFIA3-207ENST00000602716 COLGALT1Q8NBJ5 622 aa18.25■□□□□ 0.51
PPFIA3-207ENST00000602716 LCHNA4D1U4 455 aa18.25■□□□□ 0.51
PPFIA3-207ENST00000602716 AP1G2O75843 785 aa18.25■□□□□ 0.51
PPFIA3-207ENST00000602716 SETSIPP0DME0 302 aa18.25■□□□□ 0.51
PPFIA3-207ENST00000602716 BDNFP23560 247 aa18.25■□□□□ 0.51
PPFIA3-207ENST00000602716 CXCR5P32302 372 aa18.25■□□□□ 0.51
PPFIA3-207ENST00000602716 IFI16Q16666 785 aaKnown RBP18.25■□□□□ 0.51
PPFIA3-207ENST00000602716 C11orf63Q6NUN7 778 aa18.25■□□□□ 0.51
PPFIA3-207ENST00000602716 PPP1R2P3Q6NXS1 205 aa18.25■□□□□ 0.51
PPFIA3-207ENST00000602716 LEKR1Q6ZMV7 388 aa18.25■□□□□ 0.51
PPFIA3-207ENST00000602716 SLC39A11Q8N1S5 342 aa18.25■□□□□ 0.51
PPFIA3-207ENST00000602716 IPO4Q8TEX9 1081 aaKnown RBP18.25■□□□□ 0.51
PPFIA3-207ENST00000602716 NDRG1Q92597 394 aaKnown RBP18.25■□□□□ 0.51
PPFIA3-207ENST00000602716 MCRS1Q96EZ8 462 aa18.25■□□□□ 0.51
PPFIA3-207ENST00000602716 HTATIP2Q9BUP3 242 aa18.25■□□□□ 0.51
PPFIA3-207ENST00000602716 MIS12Q9H081 205 aa18.25■□□□□ 0.51
PPFIA3-207ENST00000602716 ZCWPW1Q9H0M4 648 aa18.25■□□□□ 0.51
PPFIA3-207ENST00000602716 PARVAQ9NVD7 372 aa18.25■□□□□ 0.51
PPFIA3-207ENST00000602716 CWC15Q9P013 229 aaKnown RBP18.25■□□□□ 0.51
PPFIA3-207ENST00000602716 MYH10P35580 1976 aa18.24■□□□□ 0.51
PPFIA3-207ENST00000602716 KIAA1671Q9BY89 1806 aa18.24■□□□□ 0.51
PPFIA3-207ENST00000602716 GRAP2O75791 330 aa18.24■□□□□ 0.51
PPFIA3-207ENST00000602716 FAM200BP0CF97 657 aa18.24■□□□□ 0.51
PPFIA3-207ENST00000602716 LCP1P13796 627 aa18.24■□□□□ 0.51
PPFIA3-207ENST00000602716 COMTP21964 271 aa18.24■□□□□ 0.51
PPFIA3-207ENST00000602716 CTXN3Q4LDR2 81 aa18.24■□□□□ 0.51
PPFIA3-207ENST00000602716 OR6B2Q6IFH4 312 aa18.24■□□□□ 0.51
PPFIA3-207ENST00000602716 OLFML1Q6UWY5 402 aa18.24■□□□□ 0.51
PPFIA3-207ENST00000602716 THEM5Q8N1Q8 247 aa18.24■□□□□ 0.51
PPFIA3-207ENST00000602716 TTC9BQ8N6N2 239 aa18.24■□□□□ 0.51
PPFIA3-207ENST00000602716 DPF3Q92784 378 aa18.24■□□□□ 0.51
PPFIA3-207ENST00000602716 GDAP1L1Q96MZ0 367 aa18.24■□□□□ 0.51
PPFIA3-207ENST00000602716 ZNF558Q96NG5 402 aa18.24■□□□□ 0.51
PPFIA3-207ENST00000602716 LRRC1Q9BTT6 524 aa18.24■□□□□ 0.51
PPFIA3-207ENST00000602716 SMARCAL1Q9NZC9 954 aa18.24■□□□□ 0.51
PPFIA3-207ENST00000602716 EHD2Q9NZN4 543 aa18.24■□□□□ 0.51
PPFIA3-207ENST00000602716 ALG6Q9Y672 507 aa18.24■□□□□ 0.51
PPFIA3-207ENST00000602716 SCINQ9Y6U3 715 aa18.24■□□□□ 0.51
PPFIA3-207ENST00000602716 NLRC5Q86WI3 1866 aa18.23■□□□□ 0.51
PPFIA3-207ENST00000602716 ARHGEF37A1IGU5 675 aa18.23■□□□□ 0.51
PPFIA3-207ENST00000602716 TMEM191CA6NGB0 347 aa18.23■□□□□ 0.51
PPFIA3-207ENST00000602716 CCDC85CA6NKD9 419 aa18.23■□□□□ 0.51
PPFIA3-207ENST00000602716 XPO1O14980 1071 aaKnown RBP18.23■□□□□ 0.51
PPFIA3-207ENST00000602716 ADAM12O43184 909 aa18.23■□□□□ 0.51
PPFIA3-207ENST00000602716 RPL17P18621 184 aaKnown RBP18.23■□□□□ 0.51
PPFIA3-207ENST00000602716 GSCP56915 257 aaPredicted RBP18.23■□□□□ 0.51
PPFIA3-207ENST00000602716 HTRA4P83105 476 aaPredicted RBP18.23■□□□□ 0.51
PPFIA3-207ENST00000602716 TSPY1Q01534 308 aa18.23■□□□□ 0.51
PPFIA3-207ENST00000602716 FAM102AQ5T9C2 384 aaPredicted RBP18.23■□□□□ 0.51
PPFIA3-207ENST00000602716 PEX26Q7Z412 305 aa18.23■□□□□ 0.51
PPFIA3-207ENST00000602716 SPRED2Q7Z698 418 aa18.23■□□□□ 0.51
PPFIA3-207ENST00000602716 TMEM110Q86TL2 294 aa18.23■□□□□ 0.51
PPFIA3-207ENST00000602716 STKLD1Q8NE28 680 aa18.23■□□□□ 0.51
PPFIA3-207ENST00000602716 FEZF2Q8TBJ5 459 aa18.23■□□□□ 0.51
PPFIA3-207ENST00000602716 HDAC7Q8WUI4 952 aa18.23■□□□□ 0.51
PPFIA3-207ENST00000602716 HERVK_113Q902F9 699 aa18.23■□□□□ 0.51
PPFIA3-207ENST00000602716 KRT35Q92764 455 aa18.23■□□□□ 0.51
PPFIA3-207ENST00000602716 PGLYRP2Q96PD5 576 aa18.23■□□□□ 0.51
PPFIA3-207ENST00000602716 STRIP2Q9ULQ0 834 aa18.23■□□□□ 0.51
PPFIA3-207ENST00000602716 TCF4P15884 667 aa18.23■□□□□ 0.51
PPFIA3-207ENST00000602716 RFC1P35251 1148 aaPredicted RBP18.23■□□□□ 0.51
PPFIA3-207ENST00000602716 GGCXP38435 758 aa18.23■□□□□ 0.51
PPFIA3-207ENST00000602716 RPL34P49207 117 aaKnown RBP18.23■□□□□ 0.51
PPFIA3-207ENST00000602716 ADIGQ0VDE8 80 aa18.23■□□□□ 0.51
PPFIA3-207ENST00000602716 C9orf50Q5SZB4 431 aa18.23■□□□□ 0.51
PPFIA3-207ENST00000602716 ZNF280DQ6N043 979 aa18.23■□□□□ 0.51
PPFIA3-207ENST00000602716 SCUBE3Q8IX30 993 aa18.23■□□□□ 0.51
PPFIA3-207ENST00000602716 TTPALQ9BTX7 342 aa18.23■□□□□ 0.51
PPFIA3-207ENST00000602716 DMGDHQ9UI17 866 aaKnown RBP18.23■□□□□ 0.51
PPFIA3-207ENST00000602716 HHLA1C9JL84 531 aa18.22■□□□□ 0.51
PPFIA3-207ENST00000602716 AGPSO00116 658 aa18.22■□□□□ 0.51
PPFIA3-207ENST00000602716 TBC1D4O60343 1298 aa18.22■□□□□ 0.51
PPFIA3-207ENST00000602716 ARHGEF15O94989 841 aa18.22■□□□□ 0.51
PPFIA3-207ENST00000602716 VNN2O95498 520 aa18.22■□□□□ 0.51
PPFIA3-207ENST00000602716 CYP2F1P24903 491 aa18.22■□□□□ 0.51
PPFIA3-207ENST00000602716 NDUFV1P49821 464 aa18.22■□□□□ 0.51
PPFIA3-207ENST00000602716 ARPP19P56211 112 aa18.22■□□□□ 0.51
PPFIA3-207ENST00000602716 FAM109BQ6ICB4 259 aaPredicted RBP18.22■□□□□ 0.51
PPFIA3-207ENST00000602716 HERC6Q8IVU3 1022 aa18.22■□□□□ 0.51
PPFIA3-207ENST00000602716 STK32AQ8WU08 396 aa18.22■□□□□ 0.51
PPFIA3-207ENST00000602716 KHSRPQ92945 711 aaKnown RBP eCLIP18.22■□□□□ 0.51
PPFIA3-207ENST00000602716 SMARCD1Q96GM5 515 aa18.22■□□□□ 0.51
PPFIA3-207ENST00000602716 ABI2Q9NYB9 513 aaPredicted RBP18.22■□□□□ 0.51
PPFIA3-207ENST00000602716 C2CD2LO14523 706 aa18.22■□□□□ 0.51
PPFIA3-207ENST00000602716 DDX3YO15523 660 aaKnown RBP18.22■□□□□ 0.51
PPFIA3-207ENST00000602716 IVLP07476 585 aa18.22■□□□□ 0.51
PPFIA3-207ENST00000602716 LAG3P18627 525 aa18.22■□□□□ 0.51
PPFIA3-207ENST00000602716 FLT3P36888 993 aa18.22■□□□□ 0.51
PPFIA3-207ENST00000602716 GPR15P49685 360 aa18.22■□□□□ 0.51
PPFIA3-207ENST00000602716 ADCY1Q08828 1119 aa18.22■□□□□ 0.51
PPFIA3-207ENST00000602716 ZNF268Q14587 947 aaPredicted RBP18.22■□□□□ 0.51
PPFIA3-207ENST00000602716 RAB6CQ53S08 254 aa18.22■□□□□ 0.51
PPFIA3-207ENST00000602716 CCDC181Q5TID7 509 aa18.22■□□□□ 0.51
PPFIA3-207ENST00000602716 DCAF12L1Q5VU92 463 aa18.22■□□□□ 0.51
PPFIA3-207ENST00000602716 ALG3Q92685 438 aa18.22■□□□□ 0.51
PPFIA3-207ENST00000602716 HES6Q96HZ4 224 aa18.22■□□□□ 0.51
PPFIA3-207ENST00000602716 DNAI2Q9GZS0 605 aa18.22■□□□□ 0.51
PPFIA3-207ENST00000602716 RAB6CQ9H0N0 254 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms