RNA–Protein interactions for RNA: ENST00000601614.6

SSBP4-211, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 628 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-211ENST00000601614 RESTQ13127 1097 aa17.15■□□□□ 0.34
SSBP4-211ENST00000601614 TRIP6Q15654 476 aaKnown RBP17.15■□□□□ 0.34
SSBP4-211ENST00000601614 FAM171BQ6P995 826 aa17.15■□□□□ 0.34
SSBP4-211ENST00000601614 CCNI2Q6ZMN8 369 aaPredicted RBP17.15■□□□□ 0.34
SSBP4-211ENST00000601614 CEP76Q8TAP6 659 aa17.15■□□□□ 0.34
SSBP4-211ENST00000601614 HNRNPLLQ8WVV9 542 aaKnown RBP17.15■□□□□ 0.34
SSBP4-211ENST00000601614 FUBP3Q96I24 572 aaKnown RBP eCLIP17.15■□□□□ 0.34
SSBP4-211ENST00000601614 ZHX3Q9H4I2 956 aa17.15■□□□□ 0.34
SSBP4-211ENST00000601614 CD93Q9NPY3 652 aa17.15■□□□□ 0.34
SSBP4-211ENST00000601614 ARHGEF4Q9NR80 690 aa17.15■□□□□ 0.34
SSBP4-211ENST00000601614 SMPD4Q9NXE4 827 aa17.15■□□□□ 0.34
SSBP4-211ENST00000601614 CALCOCO1Q9P1Z2 691 aa17.15■□□□□ 0.34
SSBP4-211ENST00000601614 LIMCH1Q9UPQ0 1083 aa17.15■□□□□ 0.34
SSBP4-211ENST00000601614 CPQQ9Y646 472 aa17.15■□□□□ 0.34
SSBP4-211ENST00000601614 BPTFQ12830 3046 aa17.15■□□□□ 0.34
SSBP4-211ENST00000601614 IGHV1OR15-9A0A0B4J2B8 117 aa17.14■□□□□ 0.33
SSBP4-211ENST00000601614 HUS1O60921 280 aa17.14■□□□□ 0.33
SSBP4-211ENST00000601614 OLFM2O95897 454 aa17.14■□□□□ 0.33
SSBP4-211ENST00000601614 SCP2P22307 547 aa17.14■□□□□ 0.33
SSBP4-211ENST00000601614 MAGEA11P43364 429 aa17.14■□□□□ 0.33
SSBP4-211ENST00000601614 PSMC1P62191 440 aaKnown RBP17.14■□□□□ 0.33
SSBP4-211ENST00000601614 HMGN5P82970 282 aaKnown RBP17.14■□□□□ 0.33
SSBP4-211ENST00000601614 TFAMQ00059 246 aaKnown RBP17.14■□□□□ 0.33
SSBP4-211ENST00000601614 BYSLQ13895 437 aaKnown RBP17.14■□□□□ 0.33
SSBP4-211ENST00000601614 MCM6Q14566 821 aa17.14■□□□□ 0.33
SSBP4-211ENST00000601614 SOWAHAQ2M3V2 549 aa17.14■□□□□ 0.33
SSBP4-211ENST00000601614 NT5DC4Q86YG4 428 aa17.14■□□□□ 0.33
SSBP4-211ENST00000601614 ADGRF2Q8IZF7 708 aa17.14■□□□□ 0.33
SSBP4-211ENST00000601614 TMEM86AQ8N2M4 240 aa17.14■□□□□ 0.33
SSBP4-211ENST00000601614 FAM184AQ8NB25 1140 aa17.14■□□□□ 0.33
SSBP4-211ENST00000601614 MYLPFQ96A32 169 aa17.14■□□□□ 0.33
SSBP4-211ENST00000601614 CCDC86Q9H6F5 360 aaKnown RBP17.14■□□□□ 0.33
SSBP4-211ENST00000601614 GDAP2Q9NXN4 497 aa17.14■□□□□ 0.33
SSBP4-211ENST00000601614 RAXQ9Y2V3 346 aa17.14■□□□□ 0.33
SSBP4-211ENST00000601614 SNX9Q9Y5X1 595 aa17.14■□□□□ 0.33
SSBP4-211ENST00000601614 SHROOM3Q8TF72 1996 aa17.14■□□□□ 0.33
SSBP4-211ENST00000601614 GOLGA4Q13439 2230 aaKnown RBP17.14■□□□□ 0.33
SSBP4-211ENST00000601614 ZNF840PA6NDX5 716 aa17.13■□□□□ 0.33
SSBP4-211ENST00000601614 IL18RAPO95256 599 aa17.13■□□□□ 0.33
SSBP4-211ENST00000601614 ADH5P11766 374 aa17.13■□□□□ 0.33
SSBP4-211ENST00000601614 PLCG1P19174 1290 aa17.13■□□□□ 0.33
SSBP4-211ENST00000601614 BDNFP23560 247 aa17.13■□□□□ 0.33
SSBP4-211ENST00000601614 LMO2P25791 158 aa17.13■□□□□ 0.33
SSBP4-211ENST00000601614 GRIA2P42262 883 aa17.13■□□□□ 0.33
SSBP4-211ENST00000601614 POU5F1Q01860 360 aaKnown RBP17.13■□□□□ 0.33
SSBP4-211ENST00000601614 KCNA1Q09470 495 aa17.13■□□□□ 0.33
SSBP4-211ENST00000601614 HNRNPDQ14103 355 aaKnown RBP17.13■□□□□ 0.33
SSBP4-211ENST00000601614 SLFN12LQ6IEE8 588 aa17.13■□□□□ 0.33
SSBP4-211ENST00000601614 SLCO6A1Q86UG4 719 aa17.13■□□□□ 0.33
SSBP4-211ENST00000601614 MIB1Q86YT6 1006 aa17.13■□□□□ 0.33
SSBP4-211ENST00000601614 ERLEC1Q96DZ1 483 aa17.13■□□□□ 0.33
SSBP4-211ENST00000601614 SPATA17Q96L03 361 aa17.13■□□□□ 0.33
SSBP4-211ENST00000601614 TTLL2Q9BWV7 592 aa17.13■□□□□ 0.33
SSBP4-211ENST00000601614 CD248Q9HCU0 757 aa17.13■□□□□ 0.33
SSBP4-211ENST00000601614 CRTAC1Q9NQ79 661 aa17.13■□□□□ 0.33
SSBP4-211ENST00000601614 TRPM5Q9NZQ8 1165 aa17.13■□□□□ 0.33
SSBP4-211ENST00000601614 CFAP97Q9P2B7 532 aa17.13■□□□□ 0.33
SSBP4-211ENST00000601614 SIX4Q9UIU6 781 aa17.13■□□□□ 0.33
SSBP4-211ENST00000601614 TRIM24O15164 1050 aa17.12■□□□□ 0.33
SSBP4-211ENST00000601614 OAS1P00973 400 aaKnown RBP17.12■□□□□ 0.33
SSBP4-211ENST00000601614 PFKLP17858 780 aa17.12■□□□□ 0.33
SSBP4-211ENST00000601614 WASP42768 502 aa17.12■□□□□ 0.33
SSBP4-211ENST00000601614 TNFRSF4P43489 277 aa17.12■□□□□ 0.33
SSBP4-211ENST00000601614 PDE6CP51160 858 aa17.12■□□□□ 0.33
SSBP4-211ENST00000601614 LY6G5CQ5SRR4 150 aa17.12■□□□□ 0.33
SSBP4-211ENST00000601614 DENND5BQ6ZUT9 1274 aa17.12■□□□□ 0.33
SSBP4-211ENST00000601614 NAXDQ8IW45 347 aa17.12■□□□□ 0.33
SSBP4-211ENST00000601614 ETFBKMTQ8IXQ9 262 aa17.12■□□□□ 0.33
SSBP4-211ENST00000601614 KIAA1958Q8N8K9 716 aa17.12■□□□□ 0.33
SSBP4-211ENST00000601614 NAT16Q8N8M0 369 aa17.12■□□□□ 0.33
SSBP4-211ENST00000601614 KBTBD7Q8WVZ9 684 aa17.12■□□□□ 0.33
SSBP4-211ENST00000601614 POMGNT1Q8WZA1 660 aa17.12■□□□□ 0.33
SSBP4-211ENST00000601614 LRIG1Q96JA1 1093 aa17.12■□□□□ 0.33
SSBP4-211ENST00000601614 HSPA12BQ96MM6 686 aa17.12■□□□□ 0.33
SSBP4-211ENST00000601614 ST6GALNAC4Q9H4F1 302 aa17.12■□□□□ 0.33
SSBP4-211ENST00000601614 A0A1W2PQD8 194 aa17.11■□□□□ 0.33
SSBP4-211ENST00000601614 A0A1W2PQF6 199 aa17.11■□□□□ 0.33
SSBP4-211ENST00000601614 TULP1O00294 542 aaPredicted RBP17.11■□□□□ 0.33
SSBP4-211ENST00000601614 PPP1R37O75864 691 aa17.11■□□□□ 0.33
SSBP4-211ENST00000601614 PCSK1P29120 753 aa17.11■□□□□ 0.33
SSBP4-211ENST00000601614 GRIK1P39086 918 aa17.11■□□□□ 0.33
SSBP4-211ENST00000601614 LHX1P48742 406 aa17.11■□□□□ 0.33
SSBP4-211ENST00000601614 SLC36A4Q6YBV0 504 aa17.11■□□□□ 0.33
SSBP4-211ENST00000601614 BRSK2Q8IWQ3 736 aa17.11■□□□□ 0.33
SSBP4-211ENST00000601614 CSGALNACT2Q8N6G5 542 aa17.11■□□□□ 0.33
SSBP4-211ENST00000601614 TOP6BLQ8N6T0 577 aa17.11■□□□□ 0.33
SSBP4-211ENST00000601614 LRRC52Q8N7C0 313 aa17.11■□□□□ 0.33
SSBP4-211ENST00000601614 ZNF513Q8N8E2 541 aaPredicted RBP17.11■□□□□ 0.33
SSBP4-211ENST00000601614 TRIML1Q8N9V2 468 aa17.11■□□□□ 0.33
SSBP4-211ENST00000601614 SAAL1Q96ER3 474 aa17.11■□□□□ 0.33
SSBP4-211ENST00000601614 CRELD1Q96HD1 420 aa17.11■□□□□ 0.33
SSBP4-211ENST00000601614 SYT15Q9BQS2 421 aa17.11■□□□□ 0.33
SSBP4-211ENST00000601614 FAM213AQ9BRX8 229 aa17.11■□□□□ 0.33
SSBP4-211ENST00000601614 TMEM30AQ9NV96 361 aa17.11■□□□□ 0.33
SSBP4-211ENST00000601614 MAGEC2Q9UBF1 373 aaPredicted RBP17.11■□□□□ 0.33
SSBP4-211ENST00000601614 NME7Q9Y5B8 376 aa17.11■□□□□ 0.33
SSBP4-211ENST00000601614 SLC9A3R1O14745 358 aaPredicted RBP17.1■□□□□ 0.33
SSBP4-211ENST00000601614 CBFA2T3O75081 653 aa17.1■□□□□ 0.33
SSBP4-211ENST00000601614 ADH1CP00326 375 aa17.1■□□□□ 0.33
SSBP4-211ENST00000601614 KRT18P05783 430 aaKnown RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms