RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 RPS6KA1Q15418 735 aa23.74■■□□□ 1.39
IRF3-228ENST00000601291 SHHQ15465 462 aa23.74■■□□□ 1.39
IRF3-228ENST00000601291 RAB41Q5JT25 222 aa23.74■■□□□ 1.39
IRF3-228ENST00000601291 PAPD7Q5XG87 772 aaKnown RBP23.74■■□□□ 1.39
IRF3-228ENST00000601291 KLHL23Q8NBE8 558 aa23.74■■□□□ 1.39
IRF3-228ENST00000601291 FNIP1Q8TF40 1166 aa23.74■■□□□ 1.39
IRF3-228ENST00000601291 PLVAPQ9BX97 442 aa23.74■■□□□ 1.39
IRF3-228ENST00000601291 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP23.74■■□□□ 1.39
IRF3-228ENST00000601291 LINC01553A4QN01 128 aa23.73■■□□□ 1.39
IRF3-228ENST00000601291 HHLA1C9JL84 531 aa23.73■■□□□ 1.39
IRF3-228ENST00000601291 F8VP50 259 aa23.73■■□□□ 1.39
IRF3-228ENST00000601291 SART1O43290 800 aaKnown RBP23.73■■□□□ 1.39
IRF3-228ENST00000601291 NCK2O43639 380 aa23.73■■□□□ 1.39
IRF3-228ENST00000601291 COMTP21964 271 aa23.73■■□□□ 1.39
IRF3-228ENST00000601291 MAN1A1P33908 653 aa23.73■■□□□ 1.39
IRF3-228ENST00000601291 OR1D2P34982 312 aa23.73■■□□□ 1.39
IRF3-228ENST00000601291 RFC1P35251 1148 aaPredicted RBP23.73■■□□□ 1.39
IRF3-228ENST00000601291 RABGGTBP53611 331 aa23.73■■□□□ 1.39
IRF3-228ENST00000601291 ROR1Q01973 937 aa23.73■■□□□ 1.39
IRF3-228ENST00000601291 PIGHQ14442 188 aaPredicted RBP23.73■■□□□ 1.39
IRF3-228ENST00000601291 EFHC1Q5JVL4 640 aa23.73■■□□□ 1.39
IRF3-228ENST00000601291 RNF19BQ6ZMZ0 732 aa23.73■■□□□ 1.39
IRF3-228ENST00000601291 SLC26A9Q7LBE3 791 aa23.73■■□□□ 1.39
IRF3-228ENST00000601291 SCN4BQ8IWT1 228 aa23.73■■□□□ 1.39
IRF3-228ENST00000601291 JOSD2Q8TAC2 188 aa23.73■■□□□ 1.39
IRF3-228ENST00000601291 TLR10Q9BXR5 811 aa23.73■■□□□ 1.39
IRF3-228ENST00000601291 CNGB3Q9NQW8 809 aa23.73■■□□□ 1.39
IRF3-228ENST00000601291 HYOU1Q9Y4L1 999 aa23.73■■□□□ 1.39
IRF3-228ENST00000601291 SAR1BQ9Y6B6 198 aa23.73■■□□□ 1.39
IRF3-228ENST00000601291 MIF4GDA9UHW6 222 aaKnown RBP23.72■■□□□ 1.39
IRF3-228ENST00000601291 RPL17P18621 184 aaKnown RBP23.72■■□□□ 1.39
IRF3-228ENST00000601291 TUBB2AQ13885 445 aa23.72■■□□□ 1.39
IRF3-228ENST00000601291 PTPROQ16827 1216 aa23.72■■□□□ 1.39
IRF3-228ENST00000601291 ATAD1Q8NBU5 361 aa23.72■■□□□ 1.39
IRF3-228ENST00000601291 PIWIL1Q96J94 861 aaKnown RBP23.72■■□□□ 1.39
IRF3-228ENST00000601291 C8orf48Q96LL4 319 aa23.72■■□□□ 1.39
IRF3-228ENST00000601291 TUBB2BQ9BVA1 445 aa23.72■■□□□ 1.39
IRF3-228ENST00000601291 UBE2OQ9C0C9 1292 aaKnown RBP23.72■■□□□ 1.39
IRF3-228ENST00000601291 ZBP1Q9H171 429 aa23.72■■□□□ 1.39
IRF3-228ENST00000601291 TMEM59LQ9UK28 342 aa23.72■■□□□ 1.39
IRF3-228ENST00000601291 SNX12Q9UMY4 172 aa23.72■■□□□ 1.39
IRF3-228ENST00000601291 PACSIN2Q9UNF0 486 aaPredicted RBP23.72■■□□□ 1.39
IRF3-228ENST00000601291 WDR27A2RRH5 827 aa23.71■■□□□ 1.39
IRF3-228ENST00000601291 DESP17661 470 aa23.71■■□□□ 1.39
IRF3-228ENST00000601291 DNAJB2P25686 324 aa23.71■■□□□ 1.39
IRF3-228ENST00000601291 PSMA2P25787 234 aa23.71■■□□□ 1.39
IRF3-228ENST00000601291 RNASE9P60153 205 aaKnown RBP23.71■■□□□ 1.39
IRF3-228ENST00000601291 MRPS5P82675 430 aaKnown RBP23.71■■□□□ 1.39
IRF3-228ENST00000601291 EMC1Q8N766 993 aa23.71■■□□□ 1.39
IRF3-228ENST00000601291 CLEC4CQ8WTT0 213 aa23.71■■□□□ 1.39
IRF3-228ENST00000601291 CLSTN3Q9BQT9 956 aa23.71■■□□□ 1.39
IRF3-228ENST00000601291 LZTS1Q9Y250 596 aa23.71■■□□□ 1.39
IRF3-228ENST00000601291 PTPRDP23468 1912 aa23.71■■□□□ 1.39
IRF3-228ENST00000601291 CTSAP10619 480 aa23.7■■□□□ 1.38
IRF3-228ENST00000601291 PRLRP16471 622 aa23.7■■□□□ 1.38
IRF3-228ENST00000601291 TCP1P17987 556 aaKnown RBP23.7■■□□□ 1.38
IRF3-228ENST00000601291 GPD1P21695 349 aa23.7■■□□□ 1.38
IRF3-228ENST00000601291 AMPD2Q01433 879 aa23.7■■□□□ 1.38
IRF3-228ENST00000601291 ADCY1Q08828 1119 aa23.7■■□□□ 1.38
IRF3-228ENST00000601291 TPGS2Q68CL5 300 aa23.7■■□□□ 1.38
IRF3-228ENST00000601291 ARCQ7LC44 396 aa23.7■■□□□ 1.38
IRF3-228ENST00000601291 GPRIN1Q7Z2K8 1008 aa23.7■■□□□ 1.38
IRF3-228ENST00000601291 NIPA2Q8N8Q9 360 aa23.7■■□□□ 1.38
IRF3-228ENST00000601291 HES6Q96HZ4 224 aa23.7■■□□□ 1.38
IRF3-228ENST00000601291 ULBP1Q9BZM6 244 aa23.7■■□□□ 1.38
IRF3-228ENST00000601291 ASNSD1Q9NWL6 643 aa23.7■■□□□ 1.38
IRF3-228ENST00000601291 FNIP2Q9P278 1114 aa23.7■■□□□ 1.38
IRF3-228ENST00000601291 MYH10P35580 1976 aa23.69■■□□□ 1.38
IRF3-228ENST00000601291 ADAM12O43184 909 aa23.69■■□□□ 1.38
IRF3-228ENST00000601291 HSF2BPO75031 334 aa23.69■■□□□ 1.38
IRF3-228ENST00000601291 GRAP2O75791 330 aa23.69■■□□□ 1.38
IRF3-228ENST00000601291 ZBED1O96006 694 aa23.69■■□□□ 1.38
IRF3-228ENST00000601291 DNA2P51530 1060 aa23.69■■□□□ 1.38
IRF3-228ENST00000601291 MGAT5BQ3V5L5 792 aa23.69■■□□□ 1.38
IRF3-228ENST00000601291 SCML4Q8N228 414 aa23.69■■□□□ 1.38
IRF3-228ENST00000601291 UBL4BQ8N7F7 174 aa23.69■■□□□ 1.38
IRF3-228ENST00000601291 FAM149B1Q96BN6 582 aa23.69■■□□□ 1.38
IRF3-228ENST00000601291 SEPT5Q99719 369 aaPredicted RBP23.69■■□□□ 1.38
IRF3-228ENST00000601291 AFF4Q9UHB7 1163 aaKnown RBP23.69■■□□□ 1.38
IRF3-228ENST00000601291 PCDHA11Q9Y5I1 949 aa23.69■■□□□ 1.38
IRF3-228ENST00000601291 C2CD4BA6NLJ0 364 aa23.69■■□□□ 1.38
IRF3-228ENST00000601291 GLI1P08151 1106 aa23.69■■□□□ 1.38
IRF3-228ENST00000601291 HAPLN1P10915 354 aaPredicted RBP23.69■■□□□ 1.38
IRF3-228ENST00000601291 CA8P35219 290 aa23.69■■□□□ 1.38
IRF3-228ENST00000601291 NDUFV1P49821 464 aa23.69■■□□□ 1.38
IRF3-228ENST00000601291 ZNF143P52747 638 aaPredicted RBP23.69■■□□□ 1.38
IRF3-228ENST00000601291 SLC5A3P53794 718 aa23.69■■□□□ 1.38
IRF3-228ENST00000601291 DAOAP59103 153 aa23.69■■□□□ 1.38
IRF3-228ENST00000601291 RPL10AP62906 217 aaKnown RBP23.69■■□□□ 1.38
IRF3-228ENST00000601291 OGDHQ02218 1023 aa23.69■■□□□ 1.38
IRF3-228ENST00000601291 ZNF252P-AS1Q0IIN9 211 aa23.69■■□□□ 1.38
IRF3-228ENST00000601291 ACAP1Q15027 740 aa23.69■■□□□ 1.38
IRF3-228ENST00000601291 ZNF461Q8TAF7 563 aa23.69■■□□□ 1.38
IRF3-228ENST00000601291 IRGQQ8WZA9 623 aa23.69■■□□□ 1.38
IRF3-228ENST00000601291 GOLGA1Q92805 767 aa23.69■■□□□ 1.38
IRF3-228ENST00000601291 SAMD11Q96NU1 681 aa23.69■■□□□ 1.38
IRF3-228ENST00000601291 OSBPL9Q96SU4 736 aa23.69■■□□□ 1.38
IRF3-228ENST00000601291 USTQ9Y2C2 406 aa23.69■■□□□ 1.38
IRF3-228ENST00000601291 CCDC66A2RUB6 948 aa23.68■■□□□ 1.38
IRF3-228ENST00000601291 GRXCR1A8MXD5 290 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms