RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 ASB3Q9Y575 518 aa21.12■□□□□ 0.97
SHKBP1-222ENST00000600320 C2orf16Q68DN1 1984 aa21.11■□□□□ 0.97
SHKBP1-222ENST00000600320 PIK3R2O00459 728 aa21.11■□□□□ 0.97
SHKBP1-222ENST00000600320 NRG2O14511 850 aaPredicted RBP21.11■□□□□ 0.97
SHKBP1-222ENST00000600320 XYLBO75191 536 aa21.11■□□□□ 0.97
SHKBP1-222ENST00000600320 CSH1P0DML2 217 aa21.11■□□□□ 0.97
SHKBP1-222ENST00000600320 CSH2P0DML3 217 aa21.11■□□□□ 0.97
SHKBP1-222ENST00000600320 KCNA5P22460 613 aa21.11■□□□□ 0.97
SHKBP1-222ENST00000600320 SLC8A3P57103 927 aa21.11■□□□□ 0.97
SHKBP1-222ENST00000600320 RAB41Q5JT25 222 aa21.11■□□□□ 0.97
SHKBP1-222ENST00000600320 NAA35Q5VZE5 725 aa21.11■□□□□ 0.97
SHKBP1-222ENST00000600320 GRASPQ7Z6J2 395 aaPredicted RBP21.11■□□□□ 0.97
SHKBP1-222ENST00000600320 TMEM35BQ8NCS4 154 aa21.11■□□□□ 0.97
SHKBP1-222ENST00000600320 KCTD13Q8WZ19 329 aa21.11■□□□□ 0.97
SHKBP1-222ENST00000600320 CEP295NLQ96MC4 621 aa21.11■□□□□ 0.97
SHKBP1-222ENST00000600320 CORO1BQ9BR76 489 aa21.11■□□□□ 0.97
SHKBP1-222ENST00000600320 SLC4A5Q9BY07 1137 aa21.11■□□□□ 0.97
SHKBP1-222ENST00000600320 ADAM7Q9H2U9 754 aa21.11■□□□□ 0.97
SHKBP1-222ENST00000600320 PIDD1Q9HB75 910 aa21.11■□□□□ 0.97
SHKBP1-222ENST00000600320 IL21Q9HBE4 155 aa21.11■□□□□ 0.97
SHKBP1-222ENST00000600320 SEPT11Q9NVA2 429 aaKnown RBP21.11■□□□□ 0.97
SHKBP1-222ENST00000600320 IL37Q9NZH6 218 aa21.11■□□□□ 0.97
SHKBP1-222ENST00000600320 CD207Q9UJ71 328 aa21.11■□□□□ 0.97
SHKBP1-222ENST00000600320 NOTCH4Q99466 2003 aa21.11■□□□□ 0.97
SHKBP1-222ENST00000600320 UNGP13051 313 aaPredicted RBP21.1■□□□□ 0.97
SHKBP1-222ENST00000600320 EIF4A3P38919 411 aaKnown RBP21.1■□□□□ 0.97
SHKBP1-222ENST00000600320 RPL34P49207 117 aaKnown RBP21.1■□□□□ 0.97
SHKBP1-222ENST00000600320 KIF11P52732 1056 aa21.1■□□□□ 0.97
SHKBP1-222ENST00000600320 PDCLQ13371 301 aa21.1■□□□□ 0.97
SHKBP1-222ENST00000600320 CLEC16AQ2KHT3 1053 aa21.1■□□□□ 0.97
SHKBP1-222ENST00000600320 PTPN20Q4JDL3 420 aa21.1■□□□□ 0.97
SHKBP1-222ENST00000600320 TRIM72Q6ZMU5 477 aa21.1■□□□□ 0.97
SHKBP1-222ENST00000600320 ITIH5Q86UX2 942 aa21.1■□□□□ 0.97
SHKBP1-222ENST00000600320 ELMOD1Q8N336 334 aa21.1■□□□□ 0.97
SHKBP1-222ENST00000600320 SLC30A5Q8TAD4 765 aa21.1■□□□□ 0.97
SHKBP1-222ENST00000600320 CPA5Q8WXQ8 436 aa21.1■□□□□ 0.97
SHKBP1-222ENST00000600320 NDRG1Q92597 394 aaKnown RBP21.1■□□□□ 0.97
SHKBP1-222ENST00000600320 HSFY1Q96LI6 401 aa21.1■□□□□ 0.97
SHKBP1-222ENST00000600320 CPXM1Q96SM3 734 aa21.1■□□□□ 0.97
SHKBP1-222ENST00000600320 TTLL2Q9BWV7 592 aa21.1■□□□□ 0.97
SHKBP1-222ENST00000600320 ZNHIT6Q9NWK9 470 aaKnown RBP21.1■□□□□ 0.97
SHKBP1-222ENST00000600320 CEP83Q9Y592 693 aa21.1■□□□□ 0.97
SHKBP1-222ENST00000600320 BZW2Q9Y6E2 419 aaKnown RBP21.1■□□□□ 0.97
SHKBP1-222ENST00000600320 BRWD1Q9NSI6 2320 aa21.1■□□□□ 0.97
SHKBP1-222ENST00000600320 LSM8O95777 96 aaKnown RBP21.09■□□□□ 0.97
SHKBP1-222ENST00000600320 RHOP08100 348 aa21.09■□□□□ 0.97
SHKBP1-222ENST00000600320 LCP1P13796 627 aa21.09■□□□□ 0.97
SHKBP1-222ENST00000600320 PTPN2P17706 415 aa21.09■□□□□ 0.97
SHKBP1-222ENST00000600320 TKTL1P51854 596 aa21.09■□□□□ 0.97
SHKBP1-222ENST00000600320 EPHA5P54756 1037 aa21.09■□□□□ 0.97
SHKBP1-222ENST00000600320 ADIGQ0VDE8 80 aa21.09■□□□□ 0.97
SHKBP1-222ENST00000600320 TSR1Q2NL82 804 aaKnown RBP21.09■□□□□ 0.97
SHKBP1-222ENST00000600320 SMRP1Q8NCR6 262 aa21.09■□□□□ 0.97
SHKBP1-222ENST00000600320 STK32AQ8WU08 396 aa21.09■□□□□ 0.97
SHKBP1-222ENST00000600320 HLA-CQ95604 372 aa21.09■□□□□ 0.97
SHKBP1-222ENST00000600320 MYRFLQ96LU7 910 aa21.09■□□□□ 0.97
SHKBP1-222ENST00000600320 ULBP1Q9BZM6 244 aa21.09■□□□□ 0.97
SHKBP1-222ENST00000600320 LRRC4Q9HBW1 653 aa21.09■□□□□ 0.97
SHKBP1-222ENST00000600320 ST7Q9NRC1 585 aa21.09■□□□□ 0.97
SHKBP1-222ENST00000600320 TAS2R14Q9NYV8 317 aa21.09■□□□□ 0.97
SHKBP1-222ENST00000600320 USP3Q9Y6I4 520 aa21.09■□□□□ 0.97
SHKBP1-222ENST00000600320 GRXCR2A6NFK2 248 aa21.08■□□□□ 0.97
SHKBP1-222ENST00000600320 E5RJQ4 531 aa21.08■□□□□ 0.97
SHKBP1-222ENST00000600320 MOSPD3O75425 235 aa21.08■□□□□ 0.97
SHKBP1-222ENST00000600320 TADA3O75528 432 aa21.08■□□□□ 0.97
SHKBP1-222ENST00000600320 RTN3O95197 1032 aaPredicted RBP21.08■□□□□ 0.97
SHKBP1-222ENST00000600320 ERBB2P04626 1255 aa21.08■□□□□ 0.97
SHKBP1-222ENST00000600320 MYL4P12829 197 aa21.08■□□□□ 0.97
SHKBP1-222ENST00000600320 GJA1P17302 382 aa21.08■□□□□ 0.97
SHKBP1-222ENST00000600320 FECHP22830 423 aa21.08■□□□□ 0.97
SHKBP1-222ENST00000600320 YWHAQP27348 245 aa21.08■□□□□ 0.97
SHKBP1-222ENST00000600320 CCR2P41597 374 aa21.08■□□□□ 0.97
SHKBP1-222ENST00000600320 ITIH3Q06033 890 aa21.08■□□□□ 0.97
SHKBP1-222ENST00000600320 TAF10Q12962 218 aa21.08■□□□□ 0.97
SHKBP1-222ENST00000600320 MAPK8IP2Q13387 824 aaPredicted RBP21.08■□□□□ 0.97
SHKBP1-222ENST00000600320 TAF12Q16514 161 aa21.08■□□□□ 0.97
SHKBP1-222ENST00000600320 SLC5A9Q2M3M2 681 aa21.08■□□□□ 0.97
SHKBP1-222ENST00000600320 CYP26C1Q6V0L0 522 aa21.08■□□□□ 0.97
SHKBP1-222ENST00000600320 CCDC186Q7Z3E2 898 aa21.08■□□□□ 0.97
SHKBP1-222ENST00000600320 TMEM150AQ86TG1 271 aa21.08■□□□□ 0.97
SHKBP1-222ENST00000600320 DNAAF5Q86Y56 855 aa21.08■□□□□ 0.97
SHKBP1-222ENST00000600320 TRMT2BQ96GJ1 504 aaKnown RBP21.08■□□□□ 0.97
SHKBP1-222ENST00000600320 PPP1R13BQ96KQ4 1090 aa21.08■□□□□ 0.97
SHKBP1-222ENST00000600320 PANX2Q96RD6 677 aa21.08■□□□□ 0.97
SHKBP1-222ENST00000600320 ASAH2Q9NR71 780 aa21.08■□□□□ 0.97
SHKBP1-222ENST00000600320 FAM92AA1XBS5 289 aa21.07■□□□□ 0.96
SHKBP1-222ENST00000600320 F11P03951 625 aa21.07■□□□□ 0.96
SHKBP1-222ENST00000600320 USP17L7P0C7H9 530 aa21.07■□□□□ 0.96
SHKBP1-222ENST00000600320 PGFP49763 221 aa21.07■□□□□ 0.96
SHKBP1-222ENST00000600320 CDK17Q00537 523 aa21.07■□□□□ 0.96
SHKBP1-222ENST00000600320 ASTE1Q2TB18 679 aaPredicted RBP21.07■□□□□ 0.96
SHKBP1-222ENST00000600320 PABPC1LQ4VXU2 614 aaKnown RBP21.07■□□□□ 0.96
SHKBP1-222ENST00000600320 C2CD6Q53TS8 623 aa21.07■□□□□ 0.96
SHKBP1-222ENST00000600320 PRSS36Q5K4E3 855 aa21.07■□□□□ 0.96
SHKBP1-222ENST00000600320 CES5AQ6NT32 575 aa21.07■□□□□ 0.96
SHKBP1-222ENST00000600320 BHLHA9Q7RTU4 235 aa21.07■□□□□ 0.96
SHKBP1-222ENST00000600320 TMEM110Q86TL2 294 aa21.07■□□□□ 0.96
SHKBP1-222ENST00000600320 CLEC4CQ8WTT0 213 aa21.07■□□□□ 0.96
SHKBP1-222ENST00000600320 FBXO32Q969P5 355 aa21.07■□□□□ 0.96
SHKBP1-222ENST00000600320 TCEAL4Q96EI5 215 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms