RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 MRPL45Q9BRJ2 306 aaKnown RBP22.55■■□□□ 1.2
PNKP-212ENST00000599454 TPSD1Q9BZJ3 242 aa22.55■■□□□ 1.2
PNKP-212ENST00000599454 TRIM9Q9C026 710 aa22.55■■□□□ 1.2
PNKP-212ENST00000599454 RNF38Q9H0F5 515 aa22.55■■□□□ 1.2
PNKP-212ENST00000599454 CPQQ9Y646 472 aa22.55■■□□□ 1.2
PNKP-212ENST00000599454 UBE4BO95155 1302 aa22.55■■□□□ 1.2
PNKP-212ENST00000599454 PCNX2A6NKB5 2137 aa22.54■■□□□ 1.2
PNKP-212ENST00000599454 KHNYNO15037 678 aaKnown RBP22.54■■□□□ 1.2
PNKP-212ENST00000599454 STAU1O95793 577 aaKnown RBP22.54■■□□□ 1.2
PNKP-212ENST00000599454 TNNI1P19237 187 aa22.54■■□□□ 1.2
PNKP-212ENST00000599454 HOXD13P35453 343 aa22.54■■□□□ 1.2
PNKP-212ENST00000599454 TNNC1P63316 161 aa22.54■■□□□ 1.2
PNKP-212ENST00000599454 PSMD6Q15008 389 aa22.54■■□□□ 1.2
PNKP-212ENST00000599454 STK38Q15208 465 aa22.54■■□□□ 1.2
PNKP-212ENST00000599454 DHCR24Q15392 516 aa22.54■■□□□ 1.2
PNKP-212ENST00000599454 PSAPL1Q6NUJ1 521 aa22.54■■□□□ 1.2
PNKP-212ENST00000599454 CNNM4Q6P4Q7 775 aa22.54■■□□□ 1.2
PNKP-212ENST00000599454 EPM2AIP1Q7L775 607 aaPredicted RBP22.54■■□□□ 1.2
PNKP-212ENST00000599454 CYP2U1Q7Z449 544 aa22.54■■□□□ 1.2
PNKP-212ENST00000599454 OR6B3Q8NGW1 331 aa22.54■■□□□ 1.2
PNKP-212ENST00000599454 PNKPQ96T60 521 aa22.54■■□□□ 1.2
PNKP-212ENST00000599454 CGRRF1Q99675 332 aa22.54■■□□□ 1.2
PNKP-212ENST00000599454 TBC1D14Q9P2M4 693 aa22.54■■□□□ 1.2
PNKP-212ENST00000599454 MTMR6Q9Y217 621 aa22.54■■□□□ 1.2
PNKP-212ENST00000599454 LNP1A1A4G5 178 aa22.53■■□□□ 1.2
PNKP-212ENST00000599454 C4orf47A7E2U8 309 aa22.53■■□□□ 1.2
PNKP-212ENST00000599454 PALM2-AKAP2B1ALY0 433 aaPredicted RBP22.53■■□□□ 1.2
PNKP-212ENST00000599454 ADH1CP00326 375 aa22.53■■□□□ 1.2
PNKP-212ENST00000599454 CST3P01034 146 aaPredicted RBP22.53■■□□□ 1.2
PNKP-212ENST00000599454 APODP05090 189 aa22.53■■□□□ 1.2
PNKP-212ENST00000599454 DLATP10515 647 aaKnown RBP22.53■■□□□ 1.2
PNKP-212ENST00000599454 PTPN1P18031 435 aaKnown RBP22.53■■□□□ 1.2
PNKP-212ENST00000599454 TAF10Q12962 218 aa22.53■■□□□ 1.2
PNKP-212ENST00000599454 E2F4Q16254 413 aa22.53■■□□□ 1.2
PNKP-212ENST00000599454 PDZD8Q8NEN9 1154 aa22.53■■□□□ 1.2
PNKP-212ENST00000599454 MDGA1Q8NFP4 955 aa22.53■■□□□ 1.2
PNKP-212ENST00000599454 OVCA2Q8WZ82 227 aa22.53■■□□□ 1.2
PNKP-212ENST00000599454 HPS3Q969F9 1004 aa22.53■■□□□ 1.2
PNKP-212ENST00000599454 AGPAT3Q9NRZ7 376 aa22.53■■□□□ 1.2
PNKP-212ENST00000599454 INVSQ9Y283 1065 aa22.53■■□□□ 1.2
PNKP-212ENST00000599454 CHD6Q8TD26 2715 aa22.52■■□□□ 1.2
PNKP-212ENST00000599454 A0A0A0MRY4 1105 aa22.52■■□□□ 1.2
PNKP-212ENST00000599454 RTN3O95197 1032 aaPredicted RBP22.52■■□□□ 1.2
PNKP-212ENST00000599454 ABL1P00519 1130 aa22.52■■□□□ 1.2
PNKP-212ENST00000599454 ATICP31939 592 aa22.52■■□□□ 1.2
PNKP-212ENST00000599454 NOVA1P51513 510 aaKnown RBP22.52■■□□□ 1.2
PNKP-212ENST00000599454 ASIC1P78348 528 aa22.52■■□□□ 1.2
PNKP-212ENST00000599454 CYP24A1Q07973 514 aa22.52■■□□□ 1.2
PNKP-212ENST00000599454 WDR72Q3MJ13 1102 aa22.52■■□□□ 1.2
PNKP-212ENST00000599454 FAM26FQ5R3K3 315 aa22.52■■□□□ 1.2
PNKP-212ENST00000599454 CCDC33Q8N5R6 958 aa22.52■■□□□ 1.2
PNKP-212ENST00000599454 XXYLT1Q8NBI6 393 aa22.52■■□□□ 1.2
PNKP-212ENST00000599454 LINC00301Q8NCQ3 95 aa22.52■■□□□ 1.2
PNKP-212ENST00000599454 OLIG1Q8TAK6 271 aa22.52■■□□□ 1.2
PNKP-212ENST00000599454 OTUB2Q96DC9 234 aa22.52■■□□□ 1.2
PNKP-212ENST00000599454 TMEM9BQ9NQ34 198 aa22.52■■□□□ 1.2
PNKP-212ENST00000599454 SMPD4Q9NXE4 827 aa22.52■■□□□ 1.2
PNKP-212ENST00000599454 CFAP97Q9P2B7 532 aa22.52■■□□□ 1.2
PNKP-212ENST00000599454 NME7Q9Y5B8 376 aa22.52■■□□□ 1.2
PNKP-212ENST00000599454 TGFB1I1O43294 461 aa22.51■■□□□ 1.19
PNKP-212ENST00000599454 PPP6R2O75170 966 aa22.51■■□□□ 1.19
PNKP-212ENST00000599454 KAT7O95251 611 aa22.51■■□□□ 1.19
PNKP-212ENST00000599454 MBL2P11226 248 aaPredicted RBP22.51■■□□□ 1.19
PNKP-212ENST00000599454 YWHAQP27348 245 aa22.51■■□□□ 1.19
PNKP-212ENST00000599454 TRPC3Q13507 836 aa22.51■■□□□ 1.19
PNKP-212ENST00000599454 EOGTQ5NDL2 527 aa22.51■■□□□ 1.19
PNKP-212ENST00000599454 NUP93Q8N1F7 819 aa22.51■■□□□ 1.19
PNKP-212ENST00000599454 IQUBQ8NA54 791 aa22.51■■□□□ 1.19
PNKP-212ENST00000599454 RDH13Q8NBN7 331 aa22.51■■□□□ 1.19
PNKP-212ENST00000599454 B3GALNT2Q8NCR0 500 aa22.51■■□□□ 1.19
PNKP-212ENST00000599454 WHAMMQ8TF30 809 aa22.51■■□□□ 1.19
PNKP-212ENST00000599454 SPACA7Q96KW9 195 aa22.51■■□□□ 1.19
PNKP-212ENST00000599454 ZNF518BQ9C0D4 1074 aa22.51■■□□□ 1.19
PNKP-212ENST00000599454 POLMQ9NP87 494 aaPredicted RBP22.51■■□□□ 1.19
PNKP-212ENST00000599454 CGNQ9P2M7 1197 aaKnown RBP22.51■■□□□ 1.19
PNKP-212ENST00000599454 ATP8B3O60423 1300 aa22.51■■□□□ 1.19
PNKP-212ENST00000599454 FAM208BQ5VWN6 2430 aa22.5■■□□□ 1.19
PNKP-212ENST00000599454 LAMA1P25391 3075 aa22.5■■□□□ 1.19
PNKP-212ENST00000599454 E2F8A0AVK6 867 aa22.5■■□□□ 1.19
PNKP-212ENST00000599454 A8MXQ7 604 aa22.5■■□□□ 1.19
PNKP-212ENST00000599454 SPTLC2O15270 562 aa22.5■■□□□ 1.19
PNKP-212ENST00000599454 ADH5P11766 374 aa22.5■■□□□ 1.19
PNKP-212ENST00000599454 BCKDHBP21953 392 aa22.5■■□□□ 1.19
PNKP-212ENST00000599454 GRIA2P42262 883 aa22.5■■□□□ 1.19
PNKP-212ENST00000599454 TNFRSF4P43489 277 aa22.5■■□□□ 1.19
PNKP-212ENST00000599454 SLC6A11P48066 632 aa22.5■■□□□ 1.19
PNKP-212ENST00000599454 DHPSP49366 369 aaPredicted RBP22.5■■□□□ 1.19
PNKP-212ENST00000599454 RHBDF2Q6PJF5 856 aa22.5■■□□□ 1.19
PNKP-212ENST00000599454 TMEM92Q6UXU6 159 aa22.5■■□□□ 1.19
PNKP-212ENST00000599454 ALLCQ8N6M5 410 aa22.5■■□□□ 1.19
PNKP-212ENST00000599454 IL17RCQ8NAC3 791 aa22.5■■□□□ 1.19
PNKP-212ENST00000599454 SYAP1Q96A49 352 aaPredicted RBP22.5■■□□□ 1.19
PNKP-212ENST00000599454 CCDC127Q96BQ5 260 aa22.5■■□□□ 1.19
PNKP-212ENST00000599454 C7orf25Q9BPX7 421 aa22.5■■□□□ 1.19
PNKP-212ENST00000599454 MAGEF1Q9HAY2 307 aa22.5■■□□□ 1.19
PNKP-212ENST00000599454 ARHGEF4Q9NR80 690 aa22.5■■□□□ 1.19
PNKP-212ENST00000599454 EVLQ9UI08 416 aaPredicted RBP22.5■■□□□ 1.19
PNKP-212ENST00000599454 STX6O43752 255 aa22.49■■□□□ 1.19
PNKP-212ENST00000599454 KLF8O95600 359 aaPredicted RBP22.49■■□□□ 1.19
PNKP-212ENST00000599454 CHRM1P11229 460 aaPredicted RBP22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms