RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 KIAA2013Q8IYS2 634 aa14.62□□□□□ -0.07
SCAF1-203ENST00000598359 C12orf29Q8N999 325 aa14.62□□□□□ -0.07
SCAF1-203ENST00000598359 SCAMP5Q8TAC9 235 aa14.62□□□□□ -0.07
SCAF1-203ENST00000598359 MSANTD3Q96H12 275 aa14.62□□□□□ -0.07
SCAF1-203ENST00000598359 FBRSL1Q9HCM7 1045 aaKnown RBP14.62□□□□□ -0.07
SCAF1-203ENST00000598359 FAM49BQ9NUQ9 324 aa14.62□□□□□ -0.07
SCAF1-203ENST00000598359 CFAP47Q6ZTR5 3102 aa14.62□□□□□ -0.07
SCAF1-203ENST00000598359 ZNF638Q14966 1978 aaKnown RBP14.62□□□□□ -0.07
SCAF1-203ENST00000598359 OTOGLQ3ZCN5 2332 aa14.61□□□□□ -0.07
SCAF1-203ENST00000598359 ZFHX4Q86UP3 3567 aa14.61□□□□□ -0.07
SCAF1-203ENST00000598359 ANAPC1Q9H1A4 1944 aa14.61□□□□□ -0.07
SCAF1-203ENST00000598359 ZNF840PA6NDX5 716 aa14.61□□□□□ -0.07
SCAF1-203ENST00000598359 SOBPA7XYQ1 873 aa14.61□□□□□ -0.07
SCAF1-203ENST00000598359 MAPK13O15264 365 aa14.61□□□□□ -0.07
SCAF1-203ENST00000598359 KINO60870 393 aaKnown RBP14.61□□□□□ -0.07
SCAF1-203ENST00000598359 AP1G2O75843 785 aa14.61□□□□□ -0.07
SCAF1-203ENST00000598359 KRT13P13646 458 aa14.61□□□□□ -0.07
SCAF1-203ENST00000598359 P4HA1P13674 534 aa14.61□□□□□ -0.07
SCAF1-203ENST00000598359 PSMC2P35998 433 aaKnown RBP14.61□□□□□ -0.07
SCAF1-203ENST00000598359 LRRC32Q14392 662 aa14.61□□□□□ -0.07
SCAF1-203ENST00000598359 ISM2Q6H9L7 571 aa14.61□□□□□ -0.07
SCAF1-203ENST00000598359 FSTL4Q6MZW2 842 aa14.61□□□□□ -0.07
SCAF1-203ENST00000598359 PKN3Q6P5Z2 889 aa14.61□□□□□ -0.07
SCAF1-203ENST00000598359 INTS8Q75QN2 995 aaKnown RBP14.61□□□□□ -0.07
SCAF1-203ENST00000598359 FUKQ8N0W3 1084 aa14.61□□□□□ -0.07
SCAF1-203ENST00000598359 DCLK2Q8N568 766 aa14.61□□□□□ -0.07
SCAF1-203ENST00000598359 SUMF1Q8NBK3 374 aa14.61□□□□□ -0.07
SCAF1-203ENST00000598359 SLC2A14Q8TDB8 520 aa14.61□□□□□ -0.07
SCAF1-203ENST00000598359 ATRIPQ8WXE1 791 aa14.61□□□□□ -0.07
SCAF1-203ENST00000598359 TNIP3Q96KP6 325 aa14.61□□□□□ -0.07
SCAF1-203ENST00000598359 TWNKQ96RR1 684 aa14.61□□□□□ -0.07
SCAF1-203ENST00000598359 RNF38Q9H0F5 515 aa14.61□□□□□ -0.07
SCAF1-203ENST00000598359 LINC00597Q9H2U6 94 aa14.61□□□□□ -0.07
SCAF1-203ENST00000598359 KRT82Q9NSB4 513 aa14.61□□□□□ -0.07
SCAF1-203ENST00000598359 POLR3BQ9NW08 1133 aaPredicted RBP14.61□□□□□ -0.07
SCAF1-203ENST00000598359 ZSCAN32Q9NX65 697 aa14.61□□□□□ -0.07
SCAF1-203ENST00000598359 DUS2Q9NX74 493 aaKnown RBP14.61□□□□□ -0.07
SCAF1-203ENST00000598359 SMPD4Q9NXE4 827 aa14.61□□□□□ -0.07
SCAF1-203ENST00000598359 PCDHA5Q9Y5H7 936 aa14.61□□□□□ -0.07
SCAF1-203ENST00000598359 MAP1BP46821 2468 aaKnown RBP14.61□□□□□ -0.07
SCAF1-203ENST00000598359 BEST1O76090 585 aa14.6□□□□□ -0.07
SCAF1-203ENST00000598359 CD58P19256 250 aa14.6□□□□□ -0.07
SCAF1-203ENST00000598359 RPL13P26373 211 aaKnown RBP14.6□□□□□ -0.07
SCAF1-203ENST00000598359 YWHAQP27348 245 aa14.6□□□□□ -0.07
SCAF1-203ENST00000598359 IFNAR2P48551 515 aa14.6□□□□□ -0.07
SCAF1-203ENST00000598359 CCR3P51677 355 aa14.6□□□□□ -0.07
SCAF1-203ENST00000598359 PMS1P54277 932 aaKnown RBP14.6□□□□□ -0.07
SCAF1-203ENST00000598359 CCINQ13939 588 aa14.6□□□□□ -0.07
SCAF1-203ENST00000598359 PDGFRLQ15198 375 aa14.6□□□□□ -0.07
SCAF1-203ENST00000598359 EML3Q32P44 896 aa14.6□□□□□ -0.07
SCAF1-203ENST00000598359 NUP93Q8N1F7 819 aa14.6□□□□□ -0.07
SCAF1-203ENST00000598359 ZBTB44Q8NCP5 570 aa14.6□□□□□ -0.07
SCAF1-203ENST00000598359 OSCP1Q8WVF1 389 aa14.6□□□□□ -0.07
SCAF1-203ENST00000598359 TAF4BQ92750 862 aa14.6□□□□□ -0.07
SCAF1-203ENST00000598359 NELL1Q92832 810 aa14.6□□□□□ -0.07
SCAF1-203ENST00000598359 SEMA4DQ92854 862 aa14.6□□□□□ -0.07
SCAF1-203ENST00000598359 FBXO32Q969P5 355 aa14.6□□□□□ -0.07
SCAF1-203ENST00000598359 CEP295NLQ96MC4 621 aa14.6□□□□□ -0.07
SCAF1-203ENST00000598359 SMOQ99835 787 aa14.6□□□□□ -0.07
SCAF1-203ENST00000598359 HINFPQ9BQA5 517 aa14.6□□□□□ -0.07
SCAF1-203ENST00000598359 SEMA4AQ9H3S1 761 aa14.6□□□□□ -0.07
SCAF1-203ENST00000598359 ECT2Q9H8V3 914 aa14.6□□□□□ -0.07
SCAF1-203ENST00000598359 CHORDC1Q9UHD1 332 aaPredicted RBP14.6□□□□□ -0.07
SCAF1-203ENST00000598359 ARHGAP26Q9UNA1 814 aa14.6□□□□□ -0.07
SCAF1-203ENST00000598359 PCDHGA2Q9Y5H1 932 aa14.6□□□□□ -0.07
SCAF1-203ENST00000598359 CPQQ9Y646 472 aa14.6□□□□□ -0.07
SCAF1-203ENST00000598359 ATP8B3O60423 1300 aa14.6□□□□□ -0.07
SCAF1-203ENST00000598359 GPR179Q6PRD1 2367 aa14.59□□□□□ -0.07
SCAF1-203ENST00000598359 TRIM49BA6NDI0 452 aa14.59□□□□□ -0.07
SCAF1-203ENST00000598359 LEFTY2O00292 366 aa14.59□□□□□ -0.07
SCAF1-203ENST00000598359 TNFRSF10BO14763 440 aa14.59□□□□□ -0.07
SCAF1-203ENST00000598359 GADD45BO75293 160 aaPredicted RBP14.59□□□□□ -0.07
SCAF1-203ENST00000598359 MBD3O95983 291 aa14.59□□□□□ -0.07
SCAF1-203ENST00000598359 EGFP01133 1207 aa14.59□□□□□ -0.07
SCAF1-203ENST00000598359 ADORA2BP29275 332 aa14.59□□□□□ -0.07
SCAF1-203ENST00000598359 GJA4P35212 333 aa14.59□□□□□ -0.07
SCAF1-203ENST00000598359 CXCL12P48061 93 aa14.59□□□□□ -0.07
SCAF1-203ENST00000598359 PGFP49763 221 aa14.59□□□□□ -0.07
SCAF1-203ENST00000598359 SLC5A3P53794 718 aa14.59□□□□□ -0.07
SCAF1-203ENST00000598359 MAP3K7CLP57077 242 aa14.59□□□□□ -0.07
SCAF1-203ENST00000598359 EDRF1Q3B7T1 1238 aa14.59□□□□□ -0.07
SCAF1-203ENST00000598359 DGKKQ5KSL6 1271 aa14.59□□□□□ -0.07
SCAF1-203ENST00000598359 ZNF658Q5TYW1 1059 aaPredicted RBP14.59□□□□□ -0.07
SCAF1-203ENST00000598359 HEATR6Q6AI08 1181 aaKnown RBP14.59□□□□□ -0.07
SCAF1-203ENST00000598359 ANKRD40Q6AI12 368 aa14.59□□□□□ -0.07
SCAF1-203ENST00000598359 C1orf228Q6PIY5 440 aa14.59□□□□□ -0.07
SCAF1-203ENST00000598359 SPEM1Q8N4L4 309 aa14.59□□□□□ -0.07
SCAF1-203ENST00000598359 ZMIZ2Q8NF64 920 aa14.59□□□□□ -0.07
SCAF1-203ENST00000598359 SMARCE1Q969G3 411 aa14.59□□□□□ -0.07
SCAF1-203ENST00000598359 JAKMIP2Q96AA8 810 aa14.59□□□□□ -0.07
SCAF1-203ENST00000598359 SMARCD1Q96GM5 515 aa14.59□□□□□ -0.07
SCAF1-203ENST00000598359 CCDC34Q96HJ3 373 aa14.59□□□□□ -0.07
SCAF1-203ENST00000598359 DMAP1Q9NPF5 467 aaPredicted RBP14.59□□□□□ -0.07
SCAF1-203ENST00000598359 RMND1Q9NWS8 449 aa14.59□□□□□ -0.07
SCAF1-203ENST00000598359 CHURC1-FNTBB4DL54 471 aa14.58□□□□□ -0.08
SCAF1-203ENST00000598359 CETN3O15182 167 aa14.58□□□□□ -0.08
SCAF1-203ENST00000598359 LILRB5O75023 590 aa14.58□□□□□ -0.08
SCAF1-203ENST00000598359 SMC2O95347 1197 aa14.58□□□□□ -0.08
SCAF1-203ENST00000598359 OAS1P00973 400 aaKnown RBP14.58□□□□□ -0.08
SCAF1-203ENST00000598359 FNTBP49356 437 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms