RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 EOGTQ5NDL2 527 aa18.11■□□□□ 0.49
PNKP-210ENST00000597965 ANO7Q6IWH7 933 aa18.11■□□□□ 0.49
PNKP-210ENST00000597965 CNNM4Q6P4Q7 775 aa18.11■□□□□ 0.49
PNKP-210ENST00000597965 CYP2U1Q7Z449 544 aa18.11■□□□□ 0.49
PNKP-210ENST00000597965 FILIP1Q7Z7B0 1213 aa18.11■□□□□ 0.49
PNKP-210ENST00000597965 ZNF507Q8TCN5 953 aa18.11■□□□□ 0.49
PNKP-210ENST00000597965 WHAMMQ8TF30 809 aa18.11■□□□□ 0.49
PNKP-210ENST00000597965 SYAP1Q96A49 352 aaPredicted RBP18.11■□□□□ 0.49
PNKP-210ENST00000597965 USP28Q96RU2 1077 aa18.11■□□□□ 0.49
PNKP-210ENST00000597965 FGFBP2Q9BYJ0 223 aa18.11■□□□□ 0.49
PNKP-210ENST00000597965 TRIM9Q9C026 710 aa18.11■□□□□ 0.49
PNKP-210ENST00000597965 SMOC1Q9H4F8 434 aa18.11■□□□□ 0.49
PNKP-210ENST00000597965 MAGEF1Q9HAY2 307 aa18.11■□□□□ 0.49
PNKP-210ENST00000597965 POLR3BQ9NW08 1133 aaPredicted RBP18.11■□□□□ 0.49
PNKP-210ENST00000597965 CPQQ9Y646 472 aa18.11■□□□□ 0.49
PNKP-210ENST00000597965 PTPRJQ12913 1337 aa18.11■□□□□ 0.49
PNKP-210ENST00000597965 NUP205Q92621 2012 aa18.11■□□□□ 0.49
PNKP-210ENST00000597965 A0A087X0B3 334 aa18.1■□□□□ 0.49
PNKP-210ENST00000597965 PPP6R2O75170 966 aa18.1■□□□□ 0.49
PNKP-210ENST00000597965 OAS1P00973 400 aaKnown RBP18.1■□□□□ 0.49
PNKP-210ENST00000597965 CYP17A1P05093 508 aa18.1■□□□□ 0.49
PNKP-210ENST00000597965 PTPN1P18031 435 aaKnown RBP18.1■□□□□ 0.49
PNKP-210ENST00000597965 YWHAQP27348 245 aa18.1■□□□□ 0.49
PNKP-210ENST00000597965 USP46P62068 366 aa18.1■□□□□ 0.49
PNKP-210ENST00000597965 ASIC1P78348 528 aa18.1■□□□□ 0.49
PNKP-210ENST00000597965 LMAN2Q12907 356 aa18.1■□□□□ 0.49
PNKP-210ENST00000597965 TAF10Q12962 218 aa18.1■□□□□ 0.49
PNKP-210ENST00000597965 PSMD6Q15008 389 aa18.1■□□□□ 0.49
PNKP-210ENST00000597965 DHCR24Q15392 516 aa18.1■□□□□ 0.49
PNKP-210ENST00000597965 FAM26FQ5R3K3 315 aa18.1■□□□□ 0.49
PNKP-210ENST00000597965 PSAPL1Q6NUJ1 521 aa18.1■□□□□ 0.49
PNKP-210ENST00000597965 FAM173BQ6P4H8 233 aa18.1■□□□□ 0.49
PNKP-210ENST00000597965 TRMT11Q7Z4G4 463 aaKnown RBP18.1■□□□□ 0.49
PNKP-210ENST00000597965 NUP93Q8N1F7 819 aa18.1■□□□□ 0.49
PNKP-210ENST00000597965 XXYLT1Q8NBI6 393 aa18.1■□□□□ 0.49
PNKP-210ENST00000597965 KCNV2Q8TDN2 545 aa18.1■□□□□ 0.49
PNKP-210ENST00000597965 CGRRF1Q99675 332 aa18.1■□□□□ 0.49
PNKP-210ENST00000597965 TPSD1Q9BZJ3 242 aa18.1■□□□□ 0.49
PNKP-210ENST00000597965 TMEM9BQ9NQ34 198 aa18.1■□□□□ 0.49
PNKP-210ENST00000597965 AGPAT3Q9NRZ7 376 aa18.1■□□□□ 0.49
PNKP-210ENST00000597965 THADAQ6YHU6 1953 aa18.1■□□□□ 0.49
PNKP-210ENST00000597965 A0A0A0MRY4 1105 aa18.09■□□□□ 0.49
PNKP-210ENST00000597965 E2F8A0AVK6 867 aa18.09■□□□□ 0.49
PNKP-210ENST00000597965 LNP1A1A4G5 178 aa18.09■□□□□ 0.49
PNKP-210ENST00000597965 C4orf47A7E2U8 309 aa18.09■□□□□ 0.49
PNKP-210ENST00000597965 A8MXQ7 604 aa18.09■□□□□ 0.49
PNKP-210ENST00000597965 SPTLC2O15270 562 aa18.09■□□□□ 0.49
PNKP-210ENST00000597965 MAP3K13O43283 966 aa18.09■□□□□ 0.49
PNKP-210ENST00000597965 KAT7O95251 611 aa18.09■□□□□ 0.49
PNKP-210ENST00000597965 MBL2P11226 248 aaPredicted RBP18.09■□□□□ 0.49
PNKP-210ENST00000597965 CEACAM1P13688 526 aa18.09■□□□□ 0.49
PNKP-210ENST00000597965 TRIM21P19474 475 aaKnown RBP18.09■□□□□ 0.49
PNKP-210ENST00000597965 GRIA2P42262 883 aa18.09■□□□□ 0.49
PNKP-210ENST00000597965 TNFRSF4P43489 277 aa18.09■□□□□ 0.49
PNKP-210ENST00000597965 NOVA1P51513 510 aaKnown RBP18.09■□□□□ 0.49
PNKP-210ENST00000597965 AP3M2P53677 418 aa18.09■□□□□ 0.49
PNKP-210ENST00000597965 BTBD8Q5XKL5 378 aa18.09■□□□□ 0.49
PNKP-210ENST00000597965 SCARA3Q6AZY7 606 aa18.09■□□□□ 0.49
PNKP-210ENST00000597965 TCEAL6Q6IPX3 200 aa18.09■□□□□ 0.49
PNKP-210ENST00000597965 LPCAT2Q7L5N7 544 aa18.09■□□□□ 0.49
PNKP-210ENST00000597965 RDH13Q8NBN7 331 aa18.09■□□□□ 0.49
PNKP-210ENST00000597965 B3GALNT2Q8NCR0 500 aa18.09■□□□□ 0.49
PNKP-210ENST00000597965 TCEAL3Q969E4 200 aa18.09■□□□□ 0.49
PNKP-210ENST00000597965 CCDC127Q96BQ5 260 aa18.09■□□□□ 0.49
PNKP-210ENST00000597965 FAM84AQ96KN4 292 aa18.09■□□□□ 0.49
PNKP-210ENST00000597965 TNIP3Q96KP6 325 aa18.09■□□□□ 0.49
PNKP-210ENST00000597965 ZNF396Q96N95 335 aaPredicted RBP18.09■□□□□ 0.49
PNKP-210ENST00000597965 RNF38Q9H0F5 515 aa18.09■□□□□ 0.49
PNKP-210ENST00000597965 STX6O43752 255 aa18.08■□□□□ 0.48
PNKP-210ENST00000597965 PHACTR2O75167 634 aa18.08■□□□□ 0.48
PNKP-210ENST00000597965 CST3P01034 146 aaPredicted RBP18.08■□□□□ 0.48
PNKP-210ENST00000597965 ADH5P11766 374 aa18.08■□□□□ 0.48
PNKP-210ENST00000597965 PDIA4P13667 645 aaKnown RBP18.08■□□□□ 0.48
PNKP-210ENST00000597965 TUBP50607 506 aa18.08■□□□□ 0.48
PNKP-210ENST00000597965 ZXDBP98169 803 aa18.08■□□□□ 0.48
PNKP-210ENST00000597965 GAD2Q05329 585 aa18.08■□□□□ 0.48
PNKP-210ENST00000597965 CYP24A1Q07973 514 aa18.08■□□□□ 0.48
PNKP-210ENST00000597965 EPM2AIP1Q7L775 607 aaPredicted RBP18.08■□□□□ 0.48
PNKP-210ENST00000597965 TTC30AQ86WT1 665 aa18.08■□□□□ 0.48
PNKP-210ENST00000597965 CCDC33Q8N5R6 958 aa18.08■□□□□ 0.48
PNKP-210ENST00000597965 LINC00301Q8NCQ3 95 aa18.08■□□□□ 0.48
PNKP-210ENST00000597965 MDGA1Q8NFP4 955 aa18.08■□□□□ 0.48
PNKP-210ENST00000597965 GOLGA5Q8TBA6 731 aa18.08■□□□□ 0.48
PNKP-210ENST00000597965 DUSP9Q99956 384 aaKnown RBP18.08■□□□□ 0.48
PNKP-210ENST00000597965 MRPL45Q9BRJ2 306 aaKnown RBP18.08■□□□□ 0.48
PNKP-210ENST00000597965 NUSAP1Q9BXS6 441 aaKnown RBP18.08■□□□□ 0.48
PNKP-210ENST00000597965 ARHGEF4Q9NR80 690 aa18.08■□□□□ 0.48
PNKP-210ENST00000597965 COMMD8Q9NX08 183 aa18.08■□□□□ 0.48
PNKP-210ENST00000597965 SMPD4Q9NXE4 827 aa18.08■□□□□ 0.48
PNKP-210ENST00000597965 BCCIPQ9P287 314 aaKnown RBP eCLIP18.08■□□□□ 0.48
PNKP-210ENST00000597965 CFAP97Q9P2B7 532 aa18.08■□□□□ 0.48
PNKP-210ENST00000597965 EVLQ9UI08 416 aaPredicted RBP18.08■□□□□ 0.48
PNKP-210ENST00000597965 MTMR6Q9Y217 621 aa18.08■□□□□ 0.48
PNKP-210ENST00000597965 ABCA7Q8IZY2 2146 aa18.07■□□□□ 0.48
PNKP-210ENST00000597965 TNFRSF10BO14763 440 aa18.07■□□□□ 0.48
PNKP-210ENST00000597965 ZBTB24O43167 697 aaPredicted RBP18.07■□□□□ 0.48
PNKP-210ENST00000597965 CSRP1P21291 193 aaKnown RBP18.07■□□□□ 0.48
PNKP-210ENST00000597965 DHPSP49366 369 aaPredicted RBP18.07■□□□□ 0.48
PNKP-210ENST00000597965 CYP2J2P51589 502 aa18.07■□□□□ 0.48
PNKP-210ENST00000597965 HECTD3Q5T447 861 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms