RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 FAM126AQ9BYI3 521 aaPredicted RBP16■□□□□ 0.15
LIG1-215ENST00000597901 ECT2Q9H8V3 914 aa16■□□□□ 0.15
LIG1-215ENST00000597901 CYP3A43Q9HB55 503 aa16■□□□□ 0.15
LIG1-215ENST00000597901 FBRSL1Q9HCM7 1045 aaKnown RBP16■□□□□ 0.15
LIG1-215ENST00000597901 TMEM8AQ9HCN3 771 aa16■□□□□ 0.15
LIG1-215ENST00000597901 IL37Q9NZH6 218 aa16■□□□□ 0.15
LIG1-215ENST00000597901 HOOK1Q9UJC3 728 aaKnown RBP16■□□□□ 0.15
LIG1-215ENST00000597901 WNT6Q9Y6F9 365 aa16■□□□□ 0.15
LIG1-215ENST00000597901 F5P12259 2224 aa15.99■□□□□ 0.15
LIG1-215ENST00000597901 LEFTY2O00292 366 aa15.99■□□□□ 0.15
LIG1-215ENST00000597901 LILRB5O75023 590 aa15.99■□□□□ 0.15
LIG1-215ENST00000597901 AP1G2O75843 785 aa15.99■□□□□ 0.15
LIG1-215ENST00000597901 CCDC130P13994 396 aa15.99■□□□□ 0.15
LIG1-215ENST00000597901 GJA4P35212 333 aa15.99■□□□□ 0.15
LIG1-215ENST00000597901 IFNAR2P48551 515 aa15.99■□□□□ 0.15
LIG1-215ENST00000597901 NRLP54845 237 aa15.99■□□□□ 0.15
LIG1-215ENST00000597901 SLC7A9P82251 487 aa15.99■□□□□ 0.15
LIG1-215ENST00000597901 GRSF1Q12849 480 aaKnown RBP eCLIP15.99■□□□□ 0.15
LIG1-215ENST00000597901 EML3Q32P44 896 aa15.99■□□□□ 0.15
LIG1-215ENST00000597901 TMEM196Q5HYL7 178 aa15.99■□□□□ 0.15
LIG1-215ENST00000597901 Q6ZS52 159 aa15.99■□□□□ 0.15
LIG1-215ENST00000597901 ELOA2Q8IYF1 753 aaPredicted RBP15.99■□□□□ 0.15
LIG1-215ENST00000597901 CCDC150Q8NCX0 1101 aa15.99■□□□□ 0.15
LIG1-215ENST00000597901 SLC2A14Q8TDB8 520 aa15.99■□□□□ 0.15
LIG1-215ENST00000597901 SMARCD1Q96GM5 515 aa15.99■□□□□ 0.15
LIG1-215ENST00000597901 SMOQ99835 787 aa15.99■□□□□ 0.15
LIG1-215ENST00000597901 IMPG2Q9BZV3 1241 aa15.99■□□□□ 0.15
LIG1-215ENST00000597901 DMAP1Q9NPF5 467 aaPredicted RBP15.99■□□□□ 0.15
LIG1-215ENST00000597901 COMMD8Q9NX08 183 aa15.99■□□□□ 0.15
LIG1-215ENST00000597901 HMGXB4Q9UGU5 601 aa15.99■□□□□ 0.15
LIG1-215ENST00000597901 CACNA1IQ9P0X4 2223 aa15.99■□□□□ 0.15
LIG1-215ENST00000597901 STX10O60499 249 aa15.98■□□□□ 0.15
LIG1-215ENST00000597901 BEST1O76090 585 aa15.98■□□□□ 0.15
LIG1-215ENST00000597901 OLFM2O95897 454 aa15.98■□□□□ 0.15
LIG1-215ENST00000597901 EPB41P11171 864 aaKnown RBP15.98■□□□□ 0.15
LIG1-215ENST00000597901 PMS1P54277 932 aaKnown RBP15.98■□□□□ 0.15
LIG1-215ENST00000597901 FKBP3Q00688 224 aaKnown RBP15.98■□□□□ 0.15
LIG1-215ENST00000597901 FOXK2Q01167 660 aa15.98■□□□□ 0.15
LIG1-215ENST00000597901 INCA1Q0VD86 236 aa15.98■□□□□ 0.15
LIG1-215ENST00000597901 USP4Q13107 963 aa15.98■□□□□ 0.15
LIG1-215ENST00000597901 NR1H3Q13133 447 aa15.98■□□□□ 0.15
LIG1-215ENST00000597901 ISM2Q6H9L7 571 aa15.98■□□□□ 0.15
LIG1-215ENST00000597901 FSTL4Q6MZW2 842 aa15.98■□□□□ 0.15
LIG1-215ENST00000597901 CPA6Q8N4T0 437 aa15.98■□□□□ 0.15
LIG1-215ENST00000597901 PDZD8Q8NEN9 1154 aa15.98■□□□□ 0.15
LIG1-215ENST00000597901 ZMIZ2Q8NF64 920 aa15.98■□□□□ 0.15
LIG1-215ENST00000597901 WHAMMQ8TF30 809 aa15.98■□□□□ 0.15
LIG1-215ENST00000597901 OVCA2Q8WZ82 227 aa15.98■□□□□ 0.15
LIG1-215ENST00000597901 SEMA4DQ92854 862 aa15.98■□□□□ 0.15
LIG1-215ENST00000597901 FBXO32Q969P5 355 aa15.98■□□□□ 0.15
LIG1-215ENST00000597901 CYFIP2Q96F07 1278 aa15.98■□□□□ 0.15
LIG1-215ENST00000597901 TWNKQ96RR1 684 aa15.98■□□□□ 0.15
LIG1-215ENST00000597901 HNRNPABQ99729 332 aaKnown RBP15.98■□□□□ 0.15
LIG1-215ENST00000597901 TSG101Q99816 390 aa15.98■□□□□ 0.15
LIG1-215ENST00000597901 NT5C1AQ9BXI3 368 aa15.98■□□□□ 0.15
LIG1-215ENST00000597901 GTPBP4Q9BZE4 634 aaKnown RBP15.98■□□□□ 0.15
LIG1-215ENST00000597901 CSNK1G1Q9HCP0 422 aa15.98■□□□□ 0.15
LIG1-215ENST00000597901 OAS1P00973 400 aaKnown RBP15.97■□□□□ 0.15
LIG1-215ENST00000597901 MAP3K7CLP57077 242 aa15.97■□□□□ 0.15
LIG1-215ENST00000597901 SNX30Q5VWJ9 437 aa15.97■□□□□ 0.15
LIG1-215ENST00000597901 ZC3H3Q8IXZ2 948 aaKnown RBP15.97■□□□□ 0.15
LIG1-215ENST00000597901 ADGRG2Q8IZP9 1017 aa15.97■□□□□ 0.15
LIG1-215ENST00000597901 SECISBP2LQ93073 1101 aaKnown RBP15.97■□□□□ 0.15
LIG1-215ENST00000597901 ATP2A3Q93084 1043 aa15.97■□□□□ 0.15
LIG1-215ENST00000597901 P2RY13Q9BPV8 354 aa15.97■□□□□ 0.15
LIG1-215ENST00000597901 NIF3L1Q9GZT8 377 aa15.97■□□□□ 0.15
LIG1-215ENST00000597901 KRT82Q9NSB4 513 aa15.97■□□□□ 0.15
LIG1-215ENST00000597901 FAM49BQ9NUQ9 324 aa15.97■□□□□ 0.15
LIG1-215ENST00000597901 C2orf42Q9NWW7 574 aa15.97■□□□□ 0.15
LIG1-215ENST00000597901 RAB20Q9NX57 234 aa15.97■□□□□ 0.15
LIG1-215ENST00000597901 SMPD4Q9NXE4 827 aa15.97■□□□□ 0.15
LIG1-215ENST00000597901 CPQQ9Y646 472 aa15.97■□□□□ 0.15
LIG1-215ENST00000597901 COL4A2P08572 1712 aa15.97■□□□□ 0.15
LIG1-215ENST00000597901 FAM92AA1XBS5 289 aa15.96■□□□□ 0.15
LIG1-215ENST00000597901 K7ESF4 209 aa15.96■□□□□ 0.15
LIG1-215ENST00000597901 GADD45BO75293 160 aaPredicted RBP15.96■□□□□ 0.15
LIG1-215ENST00000597901 CILPO75339 1184 aa15.96■□□□□ 0.15
LIG1-215ENST00000597901 PAPSS2O95340 614 aaPredicted RBP15.96■□□□□ 0.15
LIG1-215ENST00000597901 EGFP01133 1207 aa15.96■□□□□ 0.15
LIG1-215ENST00000597901 ZDHHC11BP0C7U3 371 aa15.96■□□□□ 0.15
LIG1-215ENST00000597901 MBL2P11226 248 aaPredicted RBP15.96■□□□□ 0.15
LIG1-215ENST00000597901 CD58P19256 250 aa15.96■□□□□ 0.15
LIG1-215ENST00000597901 TRIM21P19474 475 aaKnown RBP15.96■□□□□ 0.15
LIG1-215ENST00000597901 DRD1P21728 446 aa15.96■□□□□ 0.15
LIG1-215ENST00000597901 ADORA2BP29275 332 aa15.96■□□□□ 0.15
LIG1-215ENST00000597901 ID4P47928 161 aa15.96■□□□□ 0.15
LIG1-215ENST00000597901 SLC5A3P53794 718 aa15.96■□□□□ 0.15
LIG1-215ENST00000597901 HECTD3Q5T447 861 aa15.96■□□□□ 0.15
LIG1-215ENST00000597901 NAIF1Q69YI7 327 aaPredicted RBP15.96■□□□□ 0.15
LIG1-215ENST00000597901 DCLK2Q8N568 766 aa15.96■□□□□ 0.15
LIG1-215ENST00000597901 KIAA1958Q8N8K9 716 aa15.96■□□□□ 0.15
LIG1-215ENST00000597901 FBXL13Q8NEE6 735 aa15.96■□□□□ 0.15
LIG1-215ENST00000597901 RUBCNQ92622 972 aa15.96■□□□□ 0.15
LIG1-215ENST00000597901 TATDN2Q93075 761 aa15.96■□□□□ 0.15
LIG1-215ENST00000597901 EXOC4Q96A65 974 aa15.96■□□□□ 0.15
LIG1-215ENST00000597901 DHTKD1Q96HY7 919 aaPredicted RBP15.96■□□□□ 0.15
LIG1-215ENST00000597901 FAXDC2Q96IV6 333 aa15.96■□□□□ 0.15
LIG1-215ENST00000597901 MAN1B1Q9UKM7 699 aa15.96■□□□□ 0.15
LIG1-215ENST00000597901 TICRRQ7Z2Z1 1910 aa15.96■□□□□ 0.14
LIG1-215ENST00000597901 PTPRZ1P23471 2315 aaPredicted RBP15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms