RNA–Protein interactions for RNA: ENST00000597136.1

TRIM28-207, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-207ENST00000597136 ING5Q8WYH8 240 aa15.87■□□□□ 0.13
TRIM28-207ENST00000597136 TFAP2BQ92481 460 aa15.87■□□□□ 0.13
TRIM28-207ENST00000597136 HNRNPABQ99729 332 aaKnown RBP15.87■□□□□ 0.13
TRIM28-207ENST00000597136 ZSWIM1Q9BR11 485 aa15.87■□□□□ 0.13
TRIM28-207ENST00000597136 C2CD4DB7Z1M9 353 aa15.86■□□□□ 0.13
TRIM28-207ENST00000597136 PAEPP09466 180 aa15.86■□□□□ 0.13
TRIM28-207ENST00000597136 FSHRP23945 695 aa15.86■□□□□ 0.13
TRIM28-207ENST00000597136 USP46P62068 366 aa15.86■□□□□ 0.13
TRIM28-207ENST00000597136 PTK2Q05397 1052 aa15.86■□□□□ 0.13
TRIM28-207ENST00000597136 PLD1Q13393 1074 aa15.86■□□□□ 0.13
TRIM28-207ENST00000597136 PRSS36Q5K4E3 855 aa15.86■□□□□ 0.13
TRIM28-207ENST00000597136 GAREM2Q75VX8 874 aa15.86■□□□□ 0.13
TRIM28-207ENST00000597136 GET4Q7L5D6 327 aaPredicted RBP15.86■□□□□ 0.13
TRIM28-207ENST00000597136 ADHFE1Q8IWW8 467 aa15.86■□□□□ 0.13
TRIM28-207ENST00000597136 CHP1Q99653 195 aa15.86■□□□□ 0.13
TRIM28-207ENST00000597136 BAG1Q99933 345 aaPredicted RBP15.86■□□□□ 0.13
TRIM28-207ENST00000597136 HAUS4Q9H6D7 363 aa15.86■□□□□ 0.13
TRIM28-207ENST00000597136 IL21Q9HBE4 155 aa15.86■□□□□ 0.13
TRIM28-207ENST00000597136 ARHGAP20Q9P2F6 1191 aa15.86■□□□□ 0.13
TRIM28-207ENST00000597136 MAGED2Q9UNF1 606 aaPredicted RBP15.86■□□□□ 0.13
TRIM28-207ENST00000597136 ASB3Q9Y575 518 aa15.86■□□□□ 0.13
TRIM28-207ENST00000597136 BZW2Q9Y6E2 419 aaKnown RBP15.86■□□□□ 0.13
TRIM28-207ENST00000597136 LOC730098B7Z3J9 87 aa15.85■□□□□ 0.13
TRIM28-207ENST00000597136 PLEKP08567 350 aaPredicted RBP15.85■□□□□ 0.13
TRIM28-207ENST00000597136 CD19P15391 556 aa15.85■□□□□ 0.13
TRIM28-207ENST00000597136 CYP11B1P15538 503 aa15.85■□□□□ 0.13
TRIM28-207ENST00000597136 CEBPBP17676 345 aa15.85■□□□□ 0.13
TRIM28-207ENST00000597136 DEKP35659 375 aaKnown RBP15.85■□□□□ 0.13
TRIM28-207ENST00000597136 EPHA5P54756 1037 aa15.85■□□□□ 0.13
TRIM28-207ENST00000597136 MAP3K7CLP57077 242 aa15.85■□□□□ 0.13
TRIM28-207ENST00000597136 TMEM150AQ86TG1 271 aa15.85■□□□□ 0.13
TRIM28-207ENST00000597136 NOP9Q86U38 636 aaKnown RBP15.85■□□□□ 0.13
TRIM28-207ENST00000597136 TMTC1Q8IUR5 882 aa15.85■□□□□ 0.13
TRIM28-207ENST00000597136 EPS8L1Q8TE68 723 aa15.85■□□□□ 0.13
TRIM28-207ENST00000597136 C8orf48Q96LL4 319 aa15.85■□□□□ 0.13
TRIM28-207ENST00000597136 KRT82Q9NSB4 513 aa15.85■□□□□ 0.13
TRIM28-207ENST00000597136 NOCTQ9UK39 431 aaKnown RBP15.85■□□□□ 0.13
TRIM28-207ENST00000597136 MRPS23Q9Y3D9 190 aaKnown RBP15.85■□□□□ 0.13
TRIM28-207ENST00000597136 A0A1W2PRU2 124 aa15.84■□□□□ 0.13
TRIM28-207ENST00000597136 C19orf67A6NJJ6 358 aa15.84■□□□□ 0.13
TRIM28-207ENST00000597136 BRD2P25440 801 aaKnown RBP15.84■□□□□ 0.13
TRIM28-207ENST00000597136 GBP2P32456 591 aaPredicted RBP15.84■□□□□ 0.13
TRIM28-207ENST00000597136 VEPH1Q14D04 833 aa15.84■□□□□ 0.13
TRIM28-207ENST00000597136 TDRD12Q587J7 1177 aaKnown RBP15.84■□□□□ 0.13
TRIM28-207ENST00000597136 CYP4A22Q5TCH4 519 aa15.84■□□□□ 0.13
TRIM28-207ENST00000597136 CLEC20AQ6ZU45 233 aa15.84■□□□□ 0.13
TRIM28-207ENST00000597136 PDZD4Q76G19 769 aaPredicted RBP15.84■□□□□ 0.13
TRIM28-207ENST00000597136 ZNF571Q7Z3V5 609 aaPredicted RBP15.84■□□□□ 0.13
TRIM28-207ENST00000597136 ITIH5Q86UX2 942 aa15.84■□□□□ 0.13
TRIM28-207ENST00000597136 CCDC112Q8NEF3 446 aa15.84■□□□□ 0.13
TRIM28-207ENST00000597136 SCAMP5Q8TAC9 235 aa15.84■□□□□ 0.13
TRIM28-207ENST00000597136 SHKBP1Q8TBC3 707 aa15.84■□□□□ 0.13
TRIM28-207ENST00000597136 DDX1Q92499 740 aaKnown RBP15.84■□□□□ 0.13
TRIM28-207ENST00000597136 FGF13Q92913 245 aa15.84■□□□□ 0.13
TRIM28-207ENST00000597136 MCRS1Q96EZ8 462 aa15.84■□□□□ 0.13
TRIM28-207ENST00000597136 SMARCD1Q96GM5 515 aa15.84■□□□□ 0.13
TRIM28-207ENST00000597136 SPATA17Q96L03 361 aa15.84■□□□□ 0.13
TRIM28-207ENST00000597136 ZNF830Q96NB3 372 aaPredicted RBP15.84■□□□□ 0.13
TRIM28-207ENST00000597136 SYT11Q9BT88 431 aa15.84■□□□□ 0.13
TRIM28-207ENST00000597136 KCNF1Q9H3M0 494 aa15.84■□□□□ 0.13
TRIM28-207ENST00000597136 CSNK1G1Q9HCP0 422 aa15.84■□□□□ 0.13
TRIM28-207ENST00000597136 AVENQ9NQS1 362 aaPredicted RBP15.84■□□□□ 0.13
TRIM28-207ENST00000597136 ASAH2Q9NR71 780 aa15.84■□□□□ 0.13
TRIM28-207ENST00000597136 PRKAG3Q9UGI9 489 aa15.84■□□□□ 0.13
TRIM28-207ENST00000597136 TNFRSF10BO14763 440 aa15.83■□□□□ 0.13
TRIM28-207ENST00000597136 TRIM66O15016 1216 aa15.83■□□□□ 0.13
TRIM28-207ENST00000597136 F11P03951 625 aa15.83■□□□□ 0.13
TRIM28-207ENST00000597136 CFHP08603 1231 aa15.83■□□□□ 0.13
TRIM28-207ENST00000597136 CSH1P0DML2 217 aa15.83■□□□□ 0.13
TRIM28-207ENST00000597136 CSH2P0DML3 217 aa15.83■□□□□ 0.13
TRIM28-207ENST00000597136 VDRP11473 427 aa15.83■□□□□ 0.13
TRIM28-207ENST00000597136 GABRR2P28476 465 aa15.83■□□□□ 0.13
TRIM28-207ENST00000597136 GNA15P30679 374 aa15.83■□□□□ 0.13
TRIM28-207ENST00000597136 EIF4A3P38919 411 aaKnown RBP15.83■□□□□ 0.13
TRIM28-207ENST00000597136 PDE6CP51160 858 aa15.83■□□□□ 0.13
TRIM28-207ENST00000597136 CCZ1BP86790 482 aa15.83■□□□□ 0.13
TRIM28-207ENST00000597136 CCZ1P86791 482 aaPredicted RBP15.83■□□□□ 0.13
TRIM28-207ENST00000597136 IFRD2Q12894 506 aaPredicted RBP15.83■□□□□ 0.13
TRIM28-207ENST00000597136 MAPK8IP2Q13387 824 aaPredicted RBP15.83■□□□□ 0.13
TRIM28-207ENST00000597136 TAF12Q16514 161 aa15.83■□□□□ 0.13
TRIM28-207ENST00000597136 SGO2Q562F6 1265 aa15.83■□□□□ 0.13
TRIM28-207ENST00000597136 STXBP5Q5T5C0 1151 aa15.83■□□□□ 0.13
TRIM28-207ENST00000597136 ARHGAP17Q68EM7 881 aa15.83■□□□□ 0.13
TRIM28-207ENST00000597136 TTC30AQ86WT1 665 aa15.83■□□□□ 0.13
TRIM28-207ENST00000597136 UBA3Q8TBC4 463 aa15.83■□□□□ 0.13
TRIM28-207ENST00000597136 SLC20A1Q8WUM9 679 aa15.83■□□□□ 0.13
TRIM28-207ENST00000597136 ZSWIM3Q96MP5 696 aa15.83■□□□□ 0.13
TRIM28-207ENST00000597136 DUSP16Q9BY84 665 aa15.83■□□□□ 0.13
TRIM28-207ENST00000597136 NHEJ1Q9H9Q4 299 aaPredicted RBP15.83■□□□□ 0.13
TRIM28-207ENST00000597136 KIAA1257Q9ULG3 409 aa15.83■□□□□ 0.13
TRIM28-207ENST00000597136 ATG2BQ96BY7 2078 aa15.83■□□□□ 0.13
TRIM28-207ENST00000597136 ATP8B3O60423 1300 aa15.83■□□□□ 0.12
TRIM28-207ENST00000597136 MIA3Q5JRA6 1907 aa15.83■□□□□ 0.12
TRIM28-207ENST00000597136 TICRRQ7Z2Z1 1910 aa15.83■□□□□ 0.12
TRIM28-207ENST00000597136 SSU72P8A0A1W2PR75 194 aa15.83■□□□□ 0.12
TRIM28-207ENST00000597136 HHLA1C9JL84 531 aa15.83■□□□□ 0.12
TRIM28-207ENST00000597136 TULP2O00295 520 aa15.83■□□□□ 0.12
TRIM28-207ENST00000597136 O00370 1275 aa15.83■□□□□ 0.12
TRIM28-207ENST00000597136 FAM200BP0CF97 657 aa15.83■□□□□ 0.12
TRIM28-207ENST00000597136 LAMP2P13473 410 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms