RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 APODP05090 189 aa11.25□□□□□ -0.61
CHMP2A-202ENST00000596708 PTPN1P18031 435 aaKnown RBP11.25□□□□□ -0.61
CHMP2A-202ENST00000596708 TIE1P35590 1138 aa11.25□□□□□ -0.61
CHMP2A-202ENST00000596708 SLC6A11P48066 632 aa11.25□□□□□ -0.61
CHMP2A-202ENST00000596708 DHPSP49366 369 aaPredicted RBP11.25□□□□□ -0.61
CHMP2A-202ENST00000596708 CYP2J2P51589 502 aa11.25□□□□□ -0.61
CHMP2A-202ENST00000596708 NOP14P78316 857 aaKnown RBP11.25□□□□□ -0.61
CHMP2A-202ENST00000596708 SLC7A9P82251 487 aa11.25□□□□□ -0.61
CHMP2A-202ENST00000596708 MRPS21P82921 87 aaKnown RBP11.25□□□□□ -0.61
CHMP2A-202ENST00000596708 TAF10Q12962 218 aa11.25□□□□□ -0.61
CHMP2A-202ENST00000596708 DHCR24Q15392 516 aa11.25□□□□□ -0.61
CHMP2A-202ENST00000596708 SNRNP35Q16560 246 aaKnown RBP11.25□□□□□ -0.61
CHMP2A-202ENST00000596708 DAB2IPQ5VWQ8 1189 aa11.25□□□□□ -0.61
CHMP2A-202ENST00000596708 PSAPL1Q6NUJ1 521 aa11.25□□□□□ -0.61
CHMP2A-202ENST00000596708 NELFCDQ8IXH7 590 aa11.25□□□□□ -0.61
CHMP2A-202ENST00000596708 ZNF507Q8TCN5 953 aa11.25□□□□□ -0.61
CHMP2A-202ENST00000596708 DHX58Q96C10 678 aa11.25□□□□□ -0.61
CHMP2A-202ENST00000596708 SLITRK1Q96PX8 696 aa11.25□□□□□ -0.61
CHMP2A-202ENST00000596708 PNKPQ96T60 521 aa11.25□□□□□ -0.61
CHMP2A-202ENST00000596708 CGRRF1Q99675 332 aa11.25□□□□□ -0.61
CHMP2A-202ENST00000596708 TTLL2Q9BWV7 592 aa11.25□□□□□ -0.61
CHMP2A-202ENST00000596708 TRIM9Q9C026 710 aa11.25□□□□□ -0.61
CHMP2A-202ENST00000596708 KBTBD4Q9NVX7 518 aa11.25□□□□□ -0.61
CHMP2A-202ENST00000596708 NXF1Q9UBU9 619 aaKnown RBP11.25□□□□□ -0.61
CHMP2A-202ENST00000596708 MMP17Q9ULZ9 603 aa11.25□□□□□ -0.61
CHMP2A-202ENST00000596708 MTMR6Q9Y217 621 aa11.25□□□□□ -0.61
CHMP2A-202ENST00000596708 MORC2Q9Y6X9 1032 aaPredicted RBP11.25□□□□□ -0.61
CHMP2A-202ENST00000596708 EPG5Q9HCE0 2579 aa11.24□□□□□ -0.61
CHMP2A-202ENST00000596708 CLDN5O00501 218 aa11.24□□□□□ -0.61
CHMP2A-202ENST00000596708 SPTLC2O15270 562 aa11.24□□□□□ -0.61
CHMP2A-202ENST00000596708 MAP3K13O43283 966 aa11.24□□□□□ -0.61
CHMP2A-202ENST00000596708 STX6O43752 255 aa11.24□□□□□ -0.61
CHMP2A-202ENST00000596708 PHACTR2O75167 634 aa11.24□□□□□ -0.61
CHMP2A-202ENST00000596708 KLF8O95600 359 aaPredicted RBP11.24□□□□□ -0.61
CHMP2A-202ENST00000596708 CYP17A1P05093 508 aa11.24□□□□□ -0.61
CHMP2A-202ENST00000596708 FAM163BP0C2L3 166 aa11.24□□□□□ -0.61
CHMP2A-202ENST00000596708 BCKDHBP21953 392 aa11.24□□□□□ -0.61
CHMP2A-202ENST00000596708 YWHAQP27348 245 aa11.24□□□□□ -0.61
CHMP2A-202ENST00000596708 HOXD13P35453 343 aa11.24□□□□□ -0.61
CHMP2A-202ENST00000596708 NASPP49321 788 aaPredicted RBP11.24□□□□□ -0.61
CHMP2A-202ENST00000596708 NOVA1P51513 510 aaKnown RBP11.24□□□□□ -0.61
CHMP2A-202ENST00000596708 CYP24A1Q07973 514 aa11.24□□□□□ -0.61
CHMP2A-202ENST00000596708 PSMD6Q15008 389 aa11.24□□□□□ -0.61
CHMP2A-202ENST00000596708 CRY1Q16526 586 aa11.24□□□□□ -0.61
CHMP2A-202ENST00000596708 FAM26FQ5R3K3 315 aa11.24□□□□□ -0.61
CHMP2A-202ENST00000596708 PMS2CLQ68D20 193 aa11.24□□□□□ -0.61
CHMP2A-202ENST00000596708 CYP2U1Q7Z449 544 aa11.24□□□□□ -0.61
CHMP2A-202ENST00000596708 RASSF3Q86WH2 238 aa11.24□□□□□ -0.61
CHMP2A-202ENST00000596708 DDX42Q86XP3 938 aaKnown RBP eCLIP11.24□□□□□ -0.61
CHMP2A-202ENST00000596708 NUP93Q8N1F7 819 aa11.24□□□□□ -0.61
CHMP2A-202ENST00000596708 PGBD3Q8N328 593 aa11.24□□□□□ -0.61
CHMP2A-202ENST00000596708 IQUBQ8NA54 791 aa11.24□□□□□ -0.61
CHMP2A-202ENST00000596708 XXYLT1Q8NBI6 393 aa11.24□□□□□ -0.61
CHMP2A-202ENST00000596708 LINC00301Q8NCQ3 95 aa11.24□□□□□ -0.61
CHMP2A-202ENST00000596708 MDGA1Q8NFP4 955 aa11.24□□□□□ -0.61
CHMP2A-202ENST00000596708 PIGKQ92643 395 aa11.24□□□□□ -0.61
CHMP2A-202ENST00000596708 CNOT6LQ96LI5 555 aaKnown RBP11.24□□□□□ -0.61
CHMP2A-202ENST00000596708 MED10Q9BTT4 135 aa11.24□□□□□ -0.61
CHMP2A-202ENST00000596708 ELOVL4Q9GZR5 314 aa11.24□□□□□ -0.61
CHMP2A-202ENST00000596708 CUEDC2Q9H467 287 aa11.24□□□□□ -0.61
CHMP2A-202ENST00000596708 DPEP3Q9H4B8 488 aa11.24□□□□□ -0.61
CHMP2A-202ENST00000596708 POLMQ9NP87 494 aaPredicted RBP11.24□□□□□ -0.61
CHMP2A-202ENST00000596708 AGPAT3Q9NRZ7 376 aa11.24□□□□□ -0.61
CHMP2A-202ENST00000596708 BCCIPQ9P287 314 aaKnown RBP eCLIP11.24□□□□□ -0.61
CHMP2A-202ENST00000596708 CFAP97Q9P2B7 532 aa11.24□□□□□ -0.61
CHMP2A-202ENST00000596708 TFIP11Q9UBB9 837 aaKnown RBP11.24□□□□□ -0.61
CHMP2A-202ENST00000596708 NME7Q9Y5B8 376 aa11.24□□□□□ -0.61
CHMP2A-202ENST00000596708 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.23□□□□□ -0.61
CHMP2A-202ENST00000596708 PATE3B3GLJ2 98 aa11.23□□□□□ -0.61
CHMP2A-202ENST00000596708 TGFB1I1O43294 461 aa11.23□□□□□ -0.61
CHMP2A-202ENST00000596708 PPP6R2O75170 966 aa11.23□□□□□ -0.61
CHMP2A-202ENST00000596708 RTN3O95197 1032 aaPredicted RBP11.23□□□□□ -0.61
CHMP2A-202ENST00000596708 KAT7O95251 611 aa11.23□□□□□ -0.61
CHMP2A-202ENST00000596708 ADH1CP00326 375 aa11.23□□□□□ -0.61
CHMP2A-202ENST00000596708 OAS1P00973 400 aaKnown RBP11.23□□□□□ -0.61
CHMP2A-202ENST00000596708 ADH5P11766 374 aa11.23□□□□□ -0.61
CHMP2A-202ENST00000596708 CACNA2D1P54289 1103 aa11.23□□□□□ -0.61
CHMP2A-202ENST00000596708 MYL6P60660 151 aa11.23□□□□□ -0.61
CHMP2A-202ENST00000596708 SHC2P98077 582 aa11.23□□□□□ -0.61
CHMP2A-202ENST00000596708 KDSRQ06136 332 aa11.23□□□□□ -0.61
CHMP2A-202ENST00000596708 E2F4Q16254 413 aa11.23□□□□□ -0.61
CHMP2A-202ENST00000596708 GAB4Q2WGN9 574 aa11.23□□□□□ -0.61
CHMP2A-202ENST00000596708 UAP1L1Q3KQV9 507 aa11.23□□□□□ -0.61
CHMP2A-202ENST00000596708 EOGTQ5NDL2 527 aa11.23□□□□□ -0.61
CHMP2A-202ENST00000596708 EMC10Q5UCC4 262 aa11.23□□□□□ -0.61
CHMP2A-202ENST00000596708 RHBDF2Q6PJF5 856 aa11.23□□□□□ -0.61
CHMP2A-202ENST00000596708 TMEM92Q6UXU6 159 aa11.23□□□□□ -0.61
CHMP2A-202ENST00000596708 EPM2AIP1Q7L775 607 aaPredicted RBP11.23□□□□□ -0.61
CHMP2A-202ENST00000596708 ALLCQ8N6M5 410 aa11.23□□□□□ -0.61
CHMP2A-202ENST00000596708 KIAA1958Q8N8K9 716 aa11.23□□□□□ -0.61
CHMP2A-202ENST00000596708 TXNDC5Q8NBS9 432 aaKnown RBP11.23□□□□□ -0.61
CHMP2A-202ENST00000596708 B3GALNT2Q8NCR0 500 aa11.23□□□□□ -0.61
CHMP2A-202ENST00000596708 RLN3Q8WXF3 142 aa11.23□□□□□ -0.61
CHMP2A-202ENST00000596708 ZNF516Q92618 1163 aa11.23□□□□□ -0.61
CHMP2A-202ENST00000596708 FBXO32Q969P5 355 aa11.23□□□□□ -0.61
CHMP2A-202ENST00000596708 SYAP1Q96A49 352 aaPredicted RBP11.23□□□□□ -0.61
CHMP2A-202ENST00000596708 INTS4Q96HW7 963 aaKnown RBP11.23□□□□□ -0.61
CHMP2A-202ENST00000596708 ZNF396Q96N95 335 aaPredicted RBP11.23□□□□□ -0.61
CHMP2A-202ENST00000596708 B3GNT5Q9BYG0 378 aa11.23□□□□□ -0.61
CHMP2A-202ENST00000596708 ZNF518BQ9C0D4 1074 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms