RNA–Protein interactions for RNA: ENST00000595231.5

SNRNP70-204, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 1,673 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-204ENST00000595231 TMC8Q8IU68 726 aa23.8■■□□□ 1.4
SNRNP70-204ENST00000595231 CNGA4Q8IV77 575 aa23.8■■□□□ 1.4
SNRNP70-204ENST00000595231 HS6ST3Q8IZP7 471 aa23.8■■□□□ 1.4
SNRNP70-204ENST00000595231 ELMOD1Q8N336 334 aa23.8■■□□□ 1.4
SNRNP70-204ENST00000595231 MYRFLQ96LU7 910 aa23.8■■□□□ 1.4
SNRNP70-204ENST00000595231 ZNF638Q14966 1978 aaKnown RBP23.8■■□□□ 1.4
SNRNP70-204ENST00000595231 CDH5P33151 784 aaPredicted RBP23.79■■□□□ 1.4
SNRNP70-204ENST00000595231 RPL34P49207 117 aaKnown RBP23.79■■□□□ 1.4
SNRNP70-204ENST00000595231 ZNF571Q7Z3V5 609 aaPredicted RBP23.79■■□□□ 1.4
SNRNP70-204ENST00000595231 DRC7Q8IY82 874 aa23.79■■□□□ 1.4
SNRNP70-204ENST00000595231 KCTD13Q8WZ19 329 aa23.79■■□□□ 1.4
SNRNP70-204ENST00000595231 TRMT2BQ96GJ1 504 aaKnown RBP23.79■■□□□ 1.4
SNRNP70-204ENST00000595231 PCDHB18PQ96TA0 734 aa23.79■■□□□ 1.4
SNRNP70-204ENST00000595231 CORO1BQ9BR76 489 aa23.79■■□□□ 1.4
SNRNP70-204ENST00000595231 TTLL2Q9BWV7 592 aa23.79■■□□□ 1.4
SNRNP70-204ENST00000595231 PIDD1Q9HB75 910 aa23.79■■□□□ 1.4
SNRNP70-204ENST00000595231 ZNF334Q9HCZ1 680 aaPredicted RBP23.79■■□□□ 1.4
SNRNP70-204ENST00000595231 KIF11P52732 1056 aa23.79■■□□□ 1.4
SNRNP70-204ENST00000595231 EPHA5P54756 1037 aa23.79■■□□□ 1.4
SNRNP70-204ENST00000595231 NTHL1P78549 312 aa23.79■■□□□ 1.4
SNRNP70-204ENST00000595231 CES5AQ6NT32 575 aa23.79■■□□□ 1.4
SNRNP70-204ENST00000595231 SPC24Q8NBT2 197 aa23.79■■□□□ 1.4
SNRNP70-204ENST00000595231 STK32AQ8WU08 396 aa23.79■■□□□ 1.4
SNRNP70-204ENST00000595231 PDCL3Q9H2J4 239 aa23.79■■□□□ 1.4
SNRNP70-204ENST00000595231 MAGED2Q9UNF1 606 aaPredicted RBP23.79■■□□□ 1.4
SNRNP70-204ENST00000595231 USP3Q9Y6I4 520 aa23.79■■□□□ 1.4
SNRNP70-204ENST00000595231 FAM92AA1XBS5 289 aa23.78■■□□□ 1.4
SNRNP70-204ENST00000595231 CYP1A1P04798 512 aaPredicted RBP23.78■■□□□ 1.4
SNRNP70-204ENST00000595231 SERPING1P05155 500 aa23.78■■□□□ 1.4
SNRNP70-204ENST00000595231 RHOP08100 348 aa23.78■■□□□ 1.4
SNRNP70-204ENST00000595231 PLEKP08567 350 aaPredicted RBP23.78■■□□□ 1.4
SNRNP70-204ENST00000595231 RGS7P49802 495 aa23.78■■□□□ 1.4
SNRNP70-204ENST00000595231 C1orf131Q8NDD1 294 aaKnown RBP23.78■■□□□ 1.4
SNRNP70-204ENST00000595231 SUSD6Q92537 303 aa23.78■■□□□ 1.4
SNRNP70-204ENST00000595231 SLC4A5Q9BY07 1137 aa23.78■■□□□ 1.4
SNRNP70-204ENST00000595231 IL21Q9HBE4 155 aa23.78■■□□□ 1.4
SNRNP70-204ENST00000595231 ARHGAP20Q9P2F6 1191 aa23.78■■□□□ 1.4
SNRNP70-204ENST00000595231 IMPACTQ9P2X3 320 aa23.78■■□□□ 1.4
SNRNP70-204ENST00000595231 BZW2Q9Y6E2 419 aaKnown RBP23.78■■□□□ 1.4
SNRNP70-204ENST00000595231 GRXCR2A6NFK2 248 aa23.77■■□□□ 1.4
SNRNP70-204ENST00000595231 NRG2O14511 850 aaPredicted RBP23.77■■□□□ 1.4
SNRNP70-204ENST00000595231 RTN3O95197 1032 aaPredicted RBP23.77■■□□□ 1.4
SNRNP70-204ENST00000595231 CCR2P41597 374 aa23.77■■□□□ 1.4
SNRNP70-204ENST00000595231 PDCLQ13371 301 aa23.77■■□□□ 1.4
SNRNP70-204ENST00000595231 TAF12Q16514 161 aa23.77■■□□□ 1.4
SNRNP70-204ENST00000595231 ATAT1Q5SQI0 421 aa23.77■■□□□ 1.4
SNRNP70-204ENST00000595231 TMEM35BQ8NCS4 154 aa23.77■■□□□ 1.4
SNRNP70-204ENST00000595231 HSFY1Q96LI6 401 aa23.77■■□□□ 1.4
SNRNP70-204ENST00000595231 AVENQ9NQS1 362 aaPredicted RBP23.77■■□□□ 1.4
SNRNP70-204ENST00000595231 COMMD8Q9NX08 183 aa23.77■■□□□ 1.4
SNRNP70-204ENST00000595231 UNC80Q8N2C7 3258 aa23.77■■□□□ 1.4
SNRNP70-204ENST00000595231 LSM8O95777 96 aaKnown RBP23.76■■□□□ 1.39
SNRNP70-204ENST00000595231 UNGP13051 313 aaPredicted RBP23.76■■□□□ 1.39
SNRNP70-204ENST00000595231 NOMO3P69849 1222 aa23.76■■□□□ 1.39
SNRNP70-204ENST00000595231 LEXMQ3ZCV2 418 aa23.76■■□□□ 1.39
SNRNP70-204ENST00000595231 GAREM2Q75VX8 874 aa23.76■■□□□ 1.39
SNRNP70-204ENST00000595231 TMEM150AQ86TG1 271 aa23.76■■□□□ 1.39
SNRNP70-204ENST00000595231 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.76■■□□□ 1.39
SNRNP70-204ENST00000595231 WDR6Q9NNW5 1121 aaKnown RBP23.76■■□□□ 1.39
SNRNP70-204ENST00000595231 ASAH2Q9NR71 780 aa23.76■■□□□ 1.39
SNRNP70-204ENST00000595231 USP15Q9Y4E8 981 aaPredicted RBP23.76■■□□□ 1.39
SNRNP70-204ENST00000595231 YWHAQP27348 245 aa23.76■■□□□ 1.39
SNRNP70-204ENST00000595231 TKTL1P51854 596 aa23.76■■□□□ 1.39
SNRNP70-204ENST00000595231 TFF2Q03403 129 aa23.76■■□□□ 1.39
SNRNP70-204ENST00000595231 IFRD2Q12894 506 aaPredicted RBP23.76■■□□□ 1.39
SNRNP70-204ENST00000595231 SLC5A9Q2M3M2 681 aa23.76■■□□□ 1.39
SNRNP70-204ENST00000595231 PABPC1LQ4VXU2 614 aaKnown RBP23.76■■□□□ 1.39
SNRNP70-204ENST00000595231 PRSS36Q5K4E3 855 aa23.76■■□□□ 1.39
SNRNP70-204ENST00000595231 TMEM110Q86TL2 294 aa23.76■■□□□ 1.39
SNRNP70-204ENST00000595231 CPXM1Q96SM3 734 aa23.76■■□□□ 1.39
SNRNP70-204ENST00000595231 CEP83Q9Y592 693 aa23.76■■□□□ 1.39
SNRNP70-204ENST00000595231 MBTPS2O43462 519 aa23.75■■□□□ 1.39
SNRNP70-204ENST00000595231 F11P03951 625 aa23.75■■□□□ 1.39
SNRNP70-204ENST00000595231 TNFAIP3P21580 790 aa23.75■■□□□ 1.39
SNRNP70-204ENST00000595231 TAF10Q12962 218 aa23.75■■□□□ 1.39
SNRNP70-204ENST00000595231 SMAD4Q13485 552 aaKnown RBP23.75■■□□□ 1.39
SNRNP70-204ENST00000595231 TSR1Q2NL82 804 aaKnown RBP23.75■■□□□ 1.39
SNRNP70-204ENST00000595231 TDRD12Q587J7 1177 aaKnown RBP23.75■■□□□ 1.39
SNRNP70-204ENST00000595231 CYP4A22Q5TCH4 519 aa23.75■■□□□ 1.39
SNRNP70-204ENST00000595231 TRIM72Q6ZMU5 477 aa23.75■■□□□ 1.39
SNRNP70-204ENST00000595231 SLC30A5Q8TAD4 765 aa23.75■■□□□ 1.39
SNRNP70-204ENST00000595231 CPA5Q8WXQ8 436 aa23.75■■□□□ 1.39
SNRNP70-204ENST00000595231 TCEAL4Q96EI5 215 aa23.75■■□□□ 1.39
SNRNP70-204ENST00000595231 RIPOR3Q96MK2 946 aa23.75■■□□□ 1.39
SNRNP70-204ENST00000595231 CHP1Q99653 195 aa23.75■■□□□ 1.39
SNRNP70-204ENST00000595231 FBXO44Q9H4M3 255 aa23.75■■□□□ 1.39
SNRNP70-204ENST00000595231 LRRC4Q9HBW1 653 aa23.75■■□□□ 1.39
SNRNP70-204ENST00000595231 CYLDQ9NQC7 956 aa23.75■■□□□ 1.39
SNRNP70-204ENST00000595231 ST7Q9NRC1 585 aa23.75■■□□□ 1.39
SNRNP70-204ENST00000595231 EHD2Q9NZN4 543 aa23.75■■□□□ 1.39
SNRNP70-204ENST00000595231 TJP2Q9UDY2 1190 aa23.75■■□□□ 1.39
SNRNP70-204ENST00000595231 PIK3R2O00459 728 aa23.74■■□□□ 1.39
SNRNP70-204ENST00000595231 DDX3XO00571 662 aaKnown RBP eCLIP23.74■■□□□ 1.393e-22■□□□□ 11.3
SNRNP70-204ENST00000595231 MOSPD3O75425 235 aa23.74■■□□□ 1.39
SNRNP70-204ENST00000595231 TADA3O75528 432 aa23.74■■□□□ 1.39
SNRNP70-204ENST00000595231 MYL4P12829 197 aa23.74■■□□□ 1.39
SNRNP70-204ENST00000595231 GABRR2P28476 465 aa23.74■■□□□ 1.39
SNRNP70-204ENST00000595231 MTHFRP42898 656 aa23.74■■□□□ 1.39
SNRNP70-204ENST00000595231 ADIGQ0VDE8 80 aa23.74■■□□□ 1.39
SNRNP70-204ENST00000595231 CLEC16AQ2KHT3 1053 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms