RNA–Protein interactions for RNA: ENST00000594387.1

IRF3-208, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-208ENST00000594387 NR1H3Q13133 447 aa18.39■□□□□ 0.53
IRF3-208ENST00000594387 RUNX3Q13761 415 aa18.39■□□□□ 0.53
IRF3-208ENST00000594387 TTC8Q8TAM2 541 aa18.39■□□□□ 0.53
IRF3-208ENST00000594387 LRRC3BQ96PB8 259 aa18.39■□□□□ 0.53
IRF3-208ENST00000594387 DUS2Q9NX74 493 aaKnown RBP18.39■□□□□ 0.53
IRF3-208ENST00000594387 GTSE1Q9NYZ3 720 aa18.39■□□□□ 0.53
IRF3-208ENST00000594387 CCL26Q9Y258 94 aa18.39■□□□□ 0.53
IRF3-208ENST00000594387 COL4A3Q01955 1670 aa18.38■□□□□ 0.53
IRF3-208ENST00000594387 ZNF840PA6NDX5 716 aa18.38■□□□□ 0.53
IRF3-208ENST00000594387 SPECC1L-ADORA2AF8WAN1 911 aa18.38■□□□□ 0.53
IRF3-208ENST00000594387 ARNTLO00327 626 aa18.38■□□□□ 0.53
IRF3-208ENST00000594387 LRRN2O75325 713 aa18.38■□□□□ 0.53
IRF3-208ENST00000594387 CILPO75339 1184 aa18.38■□□□□ 0.53
IRF3-208ENST00000594387 CCDC192P0DO97 292 aa18.38■□□□□ 0.53
IRF3-208ENST00000594387 MRE11P49959 708 aa18.38■□□□□ 0.53
IRF3-208ENST00000594387 CACNA2D1P54289 1103 aa18.38■□□□□ 0.53
IRF3-208ENST00000594387 STX17P56962 302 aa18.38■□□□□ 0.53
IRF3-208ENST00000594387 MAP3K7CLP57077 242 aa18.38■□□□□ 0.53
IRF3-208ENST00000594387 MTF1Q14872 753 aa18.38■□□□□ 0.53
IRF3-208ENST00000594387 ZNF394Q53GI3 561 aa18.38■□□□□ 0.53
IRF3-208ENST00000594387 ZC3H14Q6PJT7 736 aaKnown RBP18.38■□□□□ 0.53
IRF3-208ENST00000594387 DDX42Q86XP3 938 aaKnown RBP eCLIP18.38■□□□□ 0.53
IRF3-208ENST00000594387 CREBRFQ8IUR6 639 aa18.38■□□□□ 0.53
IRF3-208ENST00000594387 CPA6Q8N4T0 437 aa18.38■□□□□ 0.53
IRF3-208ENST00000594387 C12orf29Q8N999 325 aa18.38■□□□□ 0.53
IRF3-208ENST00000594387 SEMA4DQ92854 862 aa18.38■□□□□ 0.53
IRF3-208ENST00000594387 SLC35C1Q96A29 364 aa18.38■□□□□ 0.53
IRF3-208ENST00000594387 CLDN23Q96B33 292 aa18.38■□□□□ 0.53
IRF3-208ENST00000594387 HNRNPABQ99729 332 aaKnown RBP18.38■□□□□ 0.53
IRF3-208ENST00000594387 IER2Q9BTL4 223 aa18.38■□□□□ 0.53
IRF3-208ENST00000594387 NACA2Q9H009 215 aa18.38■□□□□ 0.53
IRF3-208ENST00000594387 LMAN1LQ9HAT1 526 aa18.38■□□□□ 0.53
IRF3-208ENST00000594387 DLGAP2Q9P1A6 1054 aa18.38■□□□□ 0.53
IRF3-208ENST00000594387 HMGXB4Q9UGU5 601 aa18.38■□□□□ 0.53
IRF3-208ENST00000594387 COQ4Q9Y3A0 265 aa18.38■□□□□ 0.53
IRF3-208ENST00000594387 NCANO14594 1321 aa18.38■□□□□ 0.53
IRF3-208ENST00000594387 CACNA1IQ9P0X4 2223 aa18.38■□□□□ 0.53
IRF3-208ENST00000594387 MBL2P11226 248 aaPredicted RBP18.37■□□□□ 0.53
IRF3-208ENST00000594387 TBXAS1P24557 533 aaPredicted RBP18.37■□□□□ 0.53
IRF3-208ENST00000594387 FMO5P49326 533 aa18.37■□□□□ 0.53
IRF3-208ENST00000594387 SLC5A3P53794 718 aa18.37■□□□□ 0.53
IRF3-208ENST00000594387 TPD52L1Q16890 204 aaPredicted RBP18.37■□□□□ 0.53
IRF3-208ENST00000594387 CBWD6Q4V339 395 aa18.37■□□□□ 0.53
IRF3-208ENST00000594387 CBWD3Q5JTY5 395 aa18.37■□□□□ 0.53
IRF3-208ENST00000594387 DGKKQ5KSL6 1271 aa18.37■□□□□ 0.53
IRF3-208ENST00000594387 CBWD5Q5RIA9 395 aa18.37■□□□□ 0.53
IRF3-208ENST00000594387 TTI2Q6NXR4 508 aa18.37■□□□□ 0.53
IRF3-208ENST00000594387 PAQR9Q6ZVX9 377 aa18.37■□□□□ 0.53
IRF3-208ENST00000594387 TATDN2Q93075 761 aa18.37■□□□□ 0.53
IRF3-208ENST00000594387 ATP2A3Q93084 1043 aa18.37■□□□□ 0.53
IRF3-208ENST00000594387 TMEM176AQ96HP8 235 aa18.37■□□□□ 0.53
IRF3-208ENST00000594387 SRRTQ9BXP5 876 aaKnown RBP18.37■□□□□ 0.53
IRF3-208ENST00000594387 EBF3Q9H4W6 596 aa18.37■□□□□ 0.53
IRF3-208ENST00000594387 TLR8Q9NR97 1041 aaKnown RBP18.37■□□□□ 0.53
IRF3-208ENST00000594387 CISHQ9NSE2 258 aa18.37■□□□□ 0.53
IRF3-208ENST00000594387 GCNT4Q9P109 453 aa18.37■□□□□ 0.53
IRF3-208ENST00000594387 CHORDC1Q9UHD1 332 aaPredicted RBP18.37■□□□□ 0.53
IRF3-208ENST00000594387 ARHGAP26Q9UNA1 814 aa18.37■□□□□ 0.53
IRF3-208ENST00000594387 SLC9A3R1O14745 358 aaPredicted RBP18.36■□□□□ 0.53
IRF3-208ENST00000594387 F5P12259 2224 aa18.36■□□□□ 0.53
IRF3-208ENST00000594387 BMP6P22004 513 aa18.36■□□□□ 0.53
IRF3-208ENST00000594387 CTHP32929 405 aa18.36■□□□□ 0.53
IRF3-208ENST00000594387 SOX9P48436 509 aa18.36■□□□□ 0.53
IRF3-208ENST00000594387 TNK2Q07912 1038 aa18.36■□□□□ 0.53
IRF3-208ENST00000594387 HECTD3Q5T447 861 aa18.36■□□□□ 0.53
IRF3-208ENST00000594387 SH3RF2Q8TEC5 729 aa18.36■□□□□ 0.53
IRF3-208ENST00000594387 OSCP1Q8WVF1 389 aa18.36■□□□□ 0.53
IRF3-208ENST00000594387 JAKMIP2Q96AA8 810 aa18.36■□□□□ 0.53
IRF3-208ENST00000594387 NT5C1BQ96P26 610 aa18.36■□□□□ 0.53
IRF3-208ENST00000594387 GBP4Q96PP9 640 aa18.36■□□□□ 0.53
IRF3-208ENST00000594387 SLC22A12Q96S37 553 aa18.36■□□□□ 0.53
IRF3-208ENST00000594387 SMOQ99835 787 aa18.36■□□□□ 0.53
IRF3-208ENST00000594387 DUSP9Q99956 384 aaKnown RBP18.36■□□□□ 0.53
IRF3-208ENST00000594387 FAM83CQ9BQN1 747 aa18.36■□□□□ 0.53
IRF3-208ENST00000594387 CSNK1G1Q9HCP0 422 aa18.36■□□□□ 0.53
IRF3-208ENST00000594387 FBXO4Q9UKT5 387 aa18.36■□□□□ 0.53
IRF3-208ENST00000594387 ATG2BQ96BY7 2078 aa18.35■□□□□ 0.53
IRF3-208ENST00000594387 FANCMQ8IYD8 2048 aa18.35■□□□□ 0.53
IRF3-208ENST00000594387 GOLGA6L22H0YM25 854 aa18.35■□□□□ 0.53
IRF3-208ENST00000594387 P4HA2O15460 535 aa18.35■□□□□ 0.53
IRF3-208ENST00000594387 TCF3P15923 654 aa18.35■□□□□ 0.53
IRF3-208ENST00000594387 HOXD11P31277 338 aaPredicted RBP18.35■□□□□ 0.53
IRF3-208ENST00000594387 SLC7A9P82251 487 aa18.35■□□□□ 0.53
IRF3-208ENST00000594387 LRMPQ12912 555 aa18.35■□□□□ 0.53
IRF3-208ENST00000594387 CUL2Q13617 745 aa18.35■□□□□ 0.53
IRF3-208ENST00000594387 PON2Q15165 354 aa18.35■□□□□ 0.53
IRF3-208ENST00000594387 ZNF77Q15935 545 aa18.35■□□□□ 0.53
IRF3-208ENST00000594387 MLKLQ8NB16 471 aa18.35■□□□□ 0.53
IRF3-208ENST00000594387 SCAMP5Q8TAC9 235 aa18.35■□□□□ 0.53
IRF3-208ENST00000594387 TWNKQ96RR1 684 aa18.35■□□□□ 0.53
IRF3-208ENST00000594387 TMEM30AQ9NV96 361 aa18.35■□□□□ 0.53
IRF3-208ENST00000594387 DACH1Q9UI36 760 aa18.35■□□□□ 0.53
IRF3-208ENST00000594387 RWDD2AQ9UIY3 292 aa18.35■□□□□ 0.53
IRF3-208ENST00000594387 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.35■□□□□ 0.537e-6■■■■■ 33.3
IRF3-208ENST00000594387 LEFTY2O00292 366 aa18.34■□□□□ 0.53
IRF3-208ENST00000594387 TNFRSF10BO14763 440 aa18.34■□□□□ 0.53
IRF3-208ENST00000594387 BEST1O76090 585 aa18.34■□□□□ 0.53
IRF3-208ENST00000594387 NFATC1O95644 943 aa18.34■□□□□ 0.53
IRF3-208ENST00000594387 NBL1P41271 181 aa18.34■□□□□ 0.53
IRF3-208ENST00000594387 CSTF1Q05048 431 aaKnown RBP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms