RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 PCDHGA5Q9Y5G8 931 aa14.09□□□□□ -0.15
H3F3B-213ENST00000593254 SETXQ7Z333 2677 aaKnown RBP14.08□□□□□ -0.15
H3F3B-213ENST00000593254 LRRIQ3A6PVS8 624 aaPredicted RBP14.08□□□□□ -0.16
H3F3B-213ENST00000593254 NR3C1P04150 777 aa14.08□□□□□ -0.16
H3F3B-213ENST00000593254 PDGFRBP09619 1106 aa14.08□□□□□ -0.16
H3F3B-213ENST00000593254 GNL1P36915 607 aaPredicted RBP14.08□□□□□ -0.16
H3F3B-213ENST00000593254 KPNA1P52294 538 aaPredicted RBP14.08□□□□□ -0.16
H3F3B-213ENST00000593254 TNNC1P63316 161 aa14.08□□□□□ -0.16
H3F3B-213ENST00000593254 DPYDQ12882 1025 aa14.08□□□□□ -0.16
H3F3B-213ENST00000593254 ACAP1Q15027 740 aa14.08□□□□□ -0.16
H3F3B-213ENST00000593254 TDRD10Q5VZ19 366 aaKnown RBP14.08□□□□□ -0.16
H3F3B-213ENST00000593254 TXNDC8Q6A555 127 aa14.08□□□□□ -0.16
H3F3B-213ENST00000593254 KRBA2Q6ZNG9 492 aa14.08□□□□□ -0.16
H3F3B-213ENST00000593254 KBTBD6Q86V97 674 aa14.08□□□□□ -0.16
H3F3B-213ENST00000593254 MON1AQ86VX9 555 aa14.08□□□□□ -0.16
H3F3B-213ENST00000593254 SCN4BQ8IWT1 228 aa14.08□□□□□ -0.16
H3F3B-213ENST00000593254 MYCBPAPQ8TBZ2 947 aa14.08□□□□□ -0.16
H3F3B-213ENST00000593254 PCED1BQ96HM7 432 aa14.08□□□□□ -0.16
H3F3B-213ENST00000593254 ZFYVE19Q96K21 471 aa14.08□□□□□ -0.16
H3F3B-213ENST00000593254 SPATA17Q96L03 361 aa14.08□□□□□ -0.16
H3F3B-213ENST00000593254 CEP295NLQ96MC4 621 aa14.08□□□□□ -0.16
H3F3B-213ENST00000593254 TMEM121BQ9BXQ6 578 aaPredicted RBP14.08□□□□□ -0.16
H3F3B-213ENST00000593254 SNX25Q9H3E2 840 aa14.08□□□□□ -0.16
H3F3B-213ENST00000593254 KIF9Q9HAQ2 790 aa14.08□□□□□ -0.16
H3F3B-213ENST00000593254 GTSE1Q9NYZ3 720 aa14.08□□□□□ -0.16
H3F3B-213ENST00000593254 TRAF3IP3Q9Y228 551 aa14.08□□□□□ -0.16
H3F3B-213ENST00000593254 CCL26Q9Y258 94 aa14.08□□□□□ -0.16
H3F3B-213ENST00000593254 GCN1Q92616 2671 aaKnown RBP14.08□□□□□ -0.16
H3F3B-213ENST00000593254 PHACTR2O75167 634 aa14.07□□□□□ -0.16
H3F3B-213ENST00000593254 RPP40O75818 363 aaKnown RBP14.07□□□□□ -0.16
H3F3B-213ENST00000593254 C4BPAP04003 597 aaKnown RBP14.07□□□□□ -0.16
H3F3B-213ENST00000593254 BDNFP23560 247 aa14.07□□□□□ -0.16
H3F3B-213ENST00000593254 CYP27A1Q02318 531 aa14.07□□□□□ -0.16
H3F3B-213ENST00000593254 BIRC3Q13489 604 aa14.07□□□□□ -0.16
H3F3B-213ENST00000593254 ZNF268Q14587 947 aaPredicted RBP14.07□□□□□ -0.16
H3F3B-213ENST00000593254 PON2Q15165 354 aa14.07□□□□□ -0.16
H3F3B-213ENST00000593254 MDH1BQ5I0G3 518 aa14.07□□□□□ -0.16
H3F3B-213ENST00000593254 PSAPL1Q6NUJ1 521 aa14.07□□□□□ -0.16
H3F3B-213ENST00000593254 OR6B3Q8NGW1 331 aa14.07□□□□□ -0.16
H3F3B-213ENST00000593254 USP13Q92995 863 aaPredicted RBP14.07□□□□□ -0.16
H3F3B-213ENST00000593254 CCDC47Q96A33 483 aaKnown RBP14.07□□□□□ -0.16
H3F3B-213ENST00000593254 ZC3H10Q96K80 434 aaKnown RBP14.07□□□□□ -0.16
H3F3B-213ENST00000593254 GDPD2Q9HCC8 539 aa14.07□□□□□ -0.16
H3F3B-213ENST00000593254 TDP1Q9NUW8 608 aa14.07□□□□□ -0.16
H3F3B-213ENST00000593254 NXF1Q9UBU9 619 aaKnown RBP14.07□□□□□ -0.16
H3F3B-213ENST00000593254 NUP205Q92621 2012 aa14.07□□□□□ -0.16
H3F3B-213ENST00000593254 AKAP3O75969 853 aa14.06□□□□□ -0.16
H3F3B-213ENST00000593254 ZNF202O95125 648 aa14.06□□□□□ -0.16
H3F3B-213ENST00000593254 KIF20AO95235 890 aa14.06□□□□□ -0.16
H3F3B-213ENST00000593254 VNN1O95497 513 aa14.06□□□□□ -0.16
H3F3B-213ENST00000593254 PTPN1P18031 435 aaKnown RBP14.06□□□□□ -0.16
H3F3B-213ENST00000593254 DLG4P78352 724 aa14.06□□□□□ -0.16
H3F3B-213ENST00000593254 TNK2Q07912 1038 aa14.06□□□□□ -0.16
H3F3B-213ENST00000593254 NCOA4Q13772 614 aa14.06□□□□□ -0.16
H3F3B-213ENST00000593254 BECN1Q14457 450 aa14.06□□□□□ -0.16
H3F3B-213ENST00000593254 KCNB1Q14721 858 aa14.06□□□□□ -0.16
H3F3B-213ENST00000593254 NFIL3Q16649 462 aa14.06□□□□□ -0.16
H3F3B-213ENST00000593254 ZNF699Q32M78 642 aa14.06□□□□□ -0.16
H3F3B-213ENST00000593254 ZACNQ401N2 412 aa14.06□□□□□ -0.16
H3F3B-213ENST00000593254 PKN3Q6P5Z2 889 aa14.06□□□□□ -0.16
H3F3B-213ENST00000593254 DENND5BQ6ZUT9 1274 aa14.06□□□□□ -0.16
H3F3B-213ENST00000593254 RIN3Q8TB24 985 aa14.06□□□□□ -0.16
H3F3B-213ENST00000593254 TMC2Q8TDI7 906 aa14.06□□□□□ -0.16
H3F3B-213ENST00000593254 FAM83CQ9BQN1 747 aa14.06□□□□□ -0.16
H3F3B-213ENST00000593254 DPEP3Q9H4B8 488 aa14.06□□□□□ -0.16
H3F3B-213ENST00000593254 SMOC1Q9H4F8 434 aa14.06□□□□□ -0.16
H3F3B-213ENST00000593254 THG1LQ9NWX6 298 aaKnown RBP14.06□□□□□ -0.16
H3F3B-213ENST00000593254 CELSR3Q9NYQ7 3312 aa14.06□□□□□ -0.16
H3F3B-213ENST00000593254 ASCC3Q8N3C0 2202 aaKnown RBP14.06□□□□□ -0.16
H3F3B-213ENST00000593254 PCNX2A6NKB5 2137 aa14.05□□□□□ -0.16
H3F3B-213ENST00000593254 ABCA7Q8IZY2 2146 aa14.05□□□□□ -0.16
H3F3B-213ENST00000593254 A8MXQ7 604 aa14.05□□□□□ -0.16
H3F3B-213ENST00000593254 F8VP50 259 aa14.05□□□□□ -0.16
H3F3B-213ENST00000593254 IKBKBO14920 756 aa14.05□□□□□ -0.16
H3F3B-213ENST00000593254 TRIM66O15016 1216 aa14.05□□□□□ -0.16
H3F3B-213ENST00000593254 MAPK13O15264 365 aa14.05□□□□□ -0.16
H3F3B-213ENST00000593254 CALUO43852 315 aaPredicted RBP14.05□□□□□ -0.16
H3F3B-213ENST00000593254 ANXA13P27216 316 aa14.05□□□□□ -0.16
H3F3B-213ENST00000593254 GRIK1P39086 918 aa14.05□□□□□ -0.16
H3F3B-213ENST00000593254 MPLP40238 635 aa14.05□□□□□ -0.16
H3F3B-213ENST00000593254 FAM160A1Q05DH4 1040 aa14.05□□□□□ -0.16
H3F3B-213ENST00000593254 ITPRIPL2Q3MIP1 535 aa14.05□□□□□ -0.16
H3F3B-213ENST00000593254 ZNF667Q5HYK9 610 aa14.05□□□□□ -0.16
H3F3B-213ENST00000593254 C1orf220Q5T0J3 134 aa14.05□□□□□ -0.16
H3F3B-213ENST00000593254 CEP135Q66GS9 1140 aa14.05□□□□□ -0.16
H3F3B-213ENST00000593254 RNF43Q68DV7 783 aa14.05□□□□□ -0.16
H3F3B-213ENST00000593254 GUF1Q8N442 669 aaKnown RBP14.05□□□□□ -0.16
H3F3B-213ENST00000593254 B3GALNT2Q8NCR0 500 aa14.05□□□□□ -0.16
H3F3B-213ENST00000593254 TTC8Q8TAM2 541 aa14.05□□□□□ -0.16
H3F3B-213ENST00000593254 C8orf48Q96LL4 319 aa14.05□□□□□ -0.16
H3F3B-213ENST00000593254 SLC22A12Q96S37 553 aa14.05□□□□□ -0.16
H3F3B-213ENST00000593254 TTLL2Q9BWV7 592 aa14.05□□□□□ -0.16
H3F3B-213ENST00000593254 ELOVL4Q9GZR5 314 aa14.05□□□□□ -0.16
H3F3B-213ENST00000593254 SMYD3Q9H7B4 428 aa14.05□□□□□ -0.16
H3F3B-213ENST00000593254 VPS45Q9NRW7 570 aa14.05□□□□□ -0.16
H3F3B-213ENST00000593254 GKN1Q9NS71 199 aa14.05□□□□□ -0.16
H3F3B-213ENST00000593254 TMEM30AQ9NV96 361 aa14.05□□□□□ -0.16
H3F3B-213ENST00000593254 GCNT4Q9P109 453 aa14.05□□□□□ -0.16
H3F3B-213ENST00000593254 FRMD4BQ9Y2L6 1034 aa14.05□□□□□ -0.16
H3F3B-213ENST00000593254 CACNA1EQ15878 2313 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms