RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 KREMEN1Q96MU8 473 aa12.61□□□□□ -0.39
DDX39A-219ENST00000592927 TMEM209Q96SK2 561 aa12.61□□□□□ -0.39
DDX39A-219ENST00000592927 ARID3AQ99856 593 aa12.61□□□□□ -0.39
DDX39A-219ENST00000592927 SYT15Q9BQS2 421 aa12.61□□□□□ -0.39
DDX39A-219ENST00000592927 ZCWPW1Q9H0M4 648 aa12.61□□□□□ -0.39
DDX39A-219ENST00000592927 CISHQ9NSE2 258 aa12.61□□□□□ -0.39
DDX39A-219ENST00000592927 CDH9Q9ULB4 789 aa12.61□□□□□ -0.39
DDX39A-219ENST00000592927 WDR27A2RRH5 827 aa12.6□□□□□ -0.39
DDX39A-219ENST00000592927 FOXN3O00409 490 aaPredicted RBP12.6□□□□□ -0.39
DDX39A-219ENST00000592927 TGM5O43548 720 aa12.6□□□□□ -0.39
DDX39A-219ENST00000592927 HCRTO43612 131 aa12.6□□□□□ -0.39
DDX39A-219ENST00000592927 AKR1B10O60218 316 aa12.6□□□□□ -0.39
DDX39A-219ENST00000592927 C1RP00736 705 aa12.6□□□□□ -0.39
DDX39A-219ENST00000592927 CFHP08603 1231 aa12.6□□□□□ -0.39
DDX39A-219ENST00000592927 EIF4A3P38919 411 aaKnown RBP12.6□□□□□ -0.39
DDX39A-219ENST00000592927 CLCN4P51793 760 aa12.6□□□□□ -0.39
DDX39A-219ENST00000592927 KIF11P52732 1056 aa12.6□□□□□ -0.39
DDX39A-219ENST00000592927 BPIFB4P59827 614 aa12.6□□□□□ -0.39
DDX39A-219ENST00000592927 PSMC1P62191 440 aaKnown RBP12.6□□□□□ -0.39
DDX39A-219ENST00000592927 INCA1Q0VD86 236 aa12.6□□□□□ -0.39
DDX39A-219ENST00000592927 SMARCB1Q12824 385 aa12.6□□□□□ -0.39
DDX39A-219ENST00000592927 GPR17Q13304 367 aa12.6□□□□□ -0.39
DDX39A-219ENST00000592927 MTF1Q14872 753 aa12.6□□□□□ -0.39
DDX39A-219ENST00000592927 SPA17Q15506 151 aa12.6□□□□□ -0.39
DDX39A-219ENST00000592927 SLC39A12Q504Y0 691 aa12.6□□□□□ -0.39
DDX39A-219ENST00000592927 INTS6LQ5JSJ4 861 aaKnown RBP12.6□□□□□ -0.39
DDX39A-219ENST00000592927 TPGS2Q68CL5 300 aa12.6□□□□□ -0.39
DDX39A-219ENST00000592927 ELMSAN1Q6PJG2 1045 aa12.6□□□□□ -0.39
DDX39A-219ENST00000592927 ZNF662Q6ZS27 426 aa12.6□□□□□ -0.39
DDX39A-219ENST00000592927 ZNF461Q8TAF7 563 aa12.6□□□□□ -0.39
DDX39A-219ENST00000592927 SLC22A17Q8WUG5 538 aa12.6□□□□□ -0.39
DDX39A-219ENST00000592927 ACSF2Q96CM8 615 aaPredicted RBP12.6□□□□□ -0.39
DDX39A-219ENST00000592927 NT5C1AQ9BXI3 368 aa12.6□□□□□ -0.39
DDX39A-219ENST00000592927 HAUS4Q9H6D7 363 aa12.6□□□□□ -0.39
DDX39A-219ENST00000592927 KCNK12Q9HB15 430 aa12.6□□□□□ -0.39
DDX39A-219ENST00000592927 WNT16Q9UBV4 365 aa12.6□□□□□ -0.39
DDX39A-219ENST00000592927 DPP7Q9UHL4 492 aa12.6□□□□□ -0.39
DDX39A-219ENST00000592927 USP18Q9UMW8 372 aa12.6□□□□□ -0.39
DDX39A-219ENST00000592927 MYO10Q9HD67 2058 aa12.6□□□□□ -0.39
DDX39A-219ENST00000592927 VWA8A3KMH1 1905 aa12.59□□□□□ -0.39
DDX39A-219ENST00000592927 SPDYE4A6NLX3 237 aa12.59□□□□□ -0.39
DDX39A-219ENST00000592927 KIF2AO00139 706 aaPredicted RBP12.59□□□□□ -0.39
DDX39A-219ENST00000592927 ATP2C2O75185 946 aa12.59□□□□□ -0.39
DDX39A-219ENST00000592927 CILPO75339 1184 aa12.59□□□□□ -0.39
DDX39A-219ENST00000592927 ABLIM3O94929 683 aa12.59□□□□□ -0.39
DDX39A-219ENST00000592927 SPATA31D3P0C874 917 aa12.59□□□□□ -0.39
DDX39A-219ENST00000592927 EPCAMP16422 314 aa12.59□□□□□ -0.39
DDX39A-219ENST00000592927 PTPN1P18031 435 aaKnown RBP12.59□□□□□ -0.39
DDX39A-219ENST00000592927 ELF1P32519 619 aa12.59□□□□□ -0.39
DDX39A-219ENST00000592927 ARID5AQ03989 594 aa12.59□□□□□ -0.39
DDX39A-219ENST00000592927 MAPRE1Q15691 268 aaKnown RBP12.59□□□□□ -0.39
DDX39A-219ENST00000592927 SLC18A3Q16572 532 aa12.59□□□□□ -0.39
DDX39A-219ENST00000592927 NFE2Q16621 373 aaPredicted RBP12.59□□□□□ -0.39
DDX39A-219ENST00000592927 LILRA6Q6PI73 481 aa12.59□□□□□ -0.39
DDX39A-219ENST00000592927 RNF19BQ6ZMZ0 732 aa12.59□□□□□ -0.39
DDX39A-219ENST00000592927 SPATA31D4Q6ZUB0 917 aa12.59□□□□□ -0.39
DDX39A-219ENST00000592927 ACOT1Q86TX2 421 aa12.59□□□□□ -0.39
DDX39A-219ENST00000592927 LRRTM3Q86VH5 581 aa12.59□□□□□ -0.39
DDX39A-219ENST00000592927 B3GALNT2Q8NCR0 500 aa12.59□□□□□ -0.39
DDX39A-219ENST00000592927 KAT5Q92993 513 aa12.59□□□□□ -0.39
DDX39A-219ENST00000592927 PPP1R13BQ96KQ4 1090 aa12.59□□□□□ -0.39
DDX39A-219ENST00000592927 PGLYRP2Q96PD5 576 aa12.59□□□□□ -0.39
DDX39A-219ENST00000592927 DPEP3Q9H4B8 488 aa12.59□□□□□ -0.39
DDX39A-219ENST00000592927 TBC1D17Q9HA65 648 aa12.59□□□□□ -0.39
DDX39A-219ENST00000592927 HMGXB4Q9UGU5 601 aa12.59□□□□□ -0.39
DDX39A-219ENST00000592927 AFF4Q9UHB7 1163 aaKnown RBP12.59□□□□□ -0.39
DDX39A-219ENST00000592927 GTF3C4Q9UKN8 822 aa12.59□□□□□ -0.39
DDX39A-219ENST00000592927 CA14Q9ULX7 337 aa12.59□□□□□ -0.39
DDX39A-219ENST00000592927 MAFFQ9ULX9 164 aa12.59□□□□□ -0.39
DDX39A-219ENST00000592927 NME7Q9Y5B8 376 aa12.59□□□□□ -0.39
DDX39A-219ENST00000592927 PCDHB4Q9Y5E5 795 aa12.59□□□□□ -0.39
DDX39A-219ENST00000592927 ATP8B3O60423 1300 aa12.59□□□□□ -0.39
DDX39A-219ENST00000592927 MYBPHLA2RUH7 354 aa12.58□□□□□ -0.4
DDX39A-219ENST00000592927 PRRG1O14668 218 aa12.58□□□□□ -0.4
DDX39A-219ENST00000592927 PLEKP08567 350 aaPredicted RBP12.58□□□□□ -0.4
DDX39A-219ENST00000592927 KRT5P13647 590 aa12.58□□□□□ -0.4
DDX39A-219ENST00000592927 ATF2P15336 505 aa12.58□□□□□ -0.4
DDX39A-219ENST00000592927 PTK2Q05397 1052 aa12.58□□□□□ -0.4
DDX39A-219ENST00000592927 ADCY1Q08828 1119 aa12.58□□□□□ -0.4
DDX39A-219ENST00000592927 ORC1Q13415 861 aa12.58□□□□□ -0.4
DDX39A-219ENST00000592927 ZNF394Q53GI3 561 aa12.58□□□□□ -0.4
DDX39A-219ENST00000592927 MDH1BQ5I0G3 518 aa12.58□□□□□ -0.4
DDX39A-219ENST00000592927 LIN9Q5TKA1 542 aa12.58□□□□□ -0.4
DDX39A-219ENST00000592927 FAM171BQ6P995 826 aa12.58□□□□□ -0.4
DDX39A-219ENST00000592927 TMEM270Q6UE05 265 aa12.58□□□□□ -0.4
DDX39A-219ENST00000592927 C4orf50Q6ZRC1 276 aa12.58□□□□□ -0.4
DDX39A-219ENST00000592927 CCDC149Q6ZUS6 474 aa12.58□□□□□ -0.4
DDX39A-219ENST00000592927 ZNF571Q7Z3V5 609 aaPredicted RBP12.58□□□□□ -0.4
DDX39A-219ENST00000592927 ZNF677Q86XU0 584 aa12.58□□□□□ -0.4
DDX39A-219ENST00000592927 SPATA2LQ8IUW3 424 aaPredicted RBP12.58□□□□□ -0.4
DDX39A-219ENST00000592927 REXO1L1PQ8IX06 675 aa12.58□□□□□ -0.4
DDX39A-219ENST00000592927 MAML2Q8IZL2 1156 aaPredicted RBP12.58□□□□□ -0.4
DDX39A-219ENST00000592927 CRYBG2Q8N1P7 616 aa12.58□□□□□ -0.4
DDX39A-219ENST00000592927 MYCBPAPQ8TBZ2 947 aa12.58□□□□□ -0.4
DDX39A-219ENST00000592927 WHAMMQ8TF30 809 aa12.58□□□□□ -0.4
DDX39A-219ENST00000592927 C2orf15Q8WU43 125 aaKnown RBP12.58□□□□□ -0.4
DDX39A-219ENST00000592927 HDAC7Q8WUI4 952 aa12.58□□□□□ -0.4
DDX39A-219ENST00000592927 SECISBP2LQ93073 1101 aaKnown RBP12.58□□□□□ -0.4
DDX39A-219ENST00000592927 TMEM176AQ96HP8 235 aa12.58□□□□□ -0.4
DDX39A-219ENST00000592927 TWNKQ96RR1 684 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms