RNA–Protein interactions for RNA: ENST00000592106.5

VMP1-214, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-214ENST00000592106 KNOP1Q1ED39 458 aaKnown RBP10.8□□□□□ -0.68
VMP1-214ENST00000592106 BMT2Q1RMZ1 405 aa10.8□□□□□ -0.68
VMP1-214ENST00000592106 EML3Q32P44 896 aa10.8□□□□□ -0.68
VMP1-214ENST00000592106 WDR72Q3MJ13 1102 aa10.8□□□□□ -0.68
VMP1-214ENST00000592106 FOXD4L5Q5VV16 416 aaPredicted RBP10.8□□□□□ -0.68
VMP1-214ENST00000592106 IL31Q6EBC2 164 aa10.8□□□□□ -0.68
VMP1-214ENST00000592106 C11orf74Q86VG3 221 aa10.8□□□□□ -0.68
VMP1-214ENST00000592106 RPLP0P6Q8NHW5 317 aa10.8□□□□□ -0.68
VMP1-214ENST00000592106 RIN3Q8TB24 985 aa10.8□□□□□ -0.68
VMP1-214ENST00000592106 SCFD1Q8WVM8 642 aa10.8□□□□□ -0.68
VMP1-214ENST00000592106 FOXD4L4Q8WXT5 416 aaPredicted RBP10.8□□□□□ -0.68
VMP1-214ENST00000592106 CCDC47Q96A33 483 aaKnown RBP10.8□□□□□ -0.68
VMP1-214ENST00000592106 CHFRQ96EP1 664 aa10.8□□□□□ -0.68
VMP1-214ENST00000592106 TNIP3Q96KP6 325 aa10.8□□□□□ -0.68
VMP1-214ENST00000592106 C8orf48Q96LL4 319 aa10.8□□□□□ -0.68
VMP1-214ENST00000592106 TTLL2Q9BWV7 592 aa10.8□□□□□ -0.68
VMP1-214ENST00000592106 GCNT4Q9P109 453 aa10.8□□□□□ -0.68
VMP1-214ENST00000592106 NXF1Q9UBU9 619 aaKnown RBP10.8□□□□□ -0.68
VMP1-214ENST00000592106 PCDHGA5Q9Y5G8 931 aa10.8□□□□□ -0.68
VMP1-214ENST00000592106 HELZP42694 1942 aaKnown RBP10.8□□□□□ -0.68
VMP1-214ENST00000592106 CFAP54Q96N23 3096 aa10.79□□□□□ -0.68
VMP1-214ENST00000592106 C2orf78A6NCI8 922 aa10.79□□□□□ -0.68
VMP1-214ENST00000592106 F8VP50 259 aa10.79□□□□□ -0.68
VMP1-214ENST00000592106 LEFTY2O00292 366 aa10.79□□□□□ -0.68
VMP1-214ENST00000592106 TGFB1I1O43294 461 aa10.79□□□□□ -0.68
VMP1-214ENST00000592106 RHOBTB1O94844 696 aa10.79□□□□□ -0.68
VMP1-214ENST00000592106 KIF20AO95235 890 aa10.79□□□□□ -0.68
VMP1-214ENST00000592106 ABL1P00519 1130 aa10.79□□□□□ -0.68
VMP1-214ENST00000592106 PTPN1P18031 435 aaKnown RBP10.79□□□□□ -0.68
VMP1-214ENST00000592106 HOXD13P35453 343 aa10.79□□□□□ -0.68
VMP1-214ENST00000592106 AFMP43652 599 aa10.79□□□□□ -0.68
VMP1-214ENST00000592106 GALK1P51570 392 aa10.79□□□□□ -0.68
VMP1-214ENST00000592106 SLC7A9P82251 487 aa10.79□□□□□ -0.68
VMP1-214ENST00000592106 EHHADHQ08426 723 aa10.79□□□□□ -0.68
VMP1-214ENST00000592106 IFRD2Q12894 506 aaPredicted RBP10.79□□□□□ -0.68
VMP1-214ENST00000592106 DMC1Q14565 340 aa10.79□□□□□ -0.68
VMP1-214ENST00000592106 ZNF699Q32M78 642 aa10.79□□□□□ -0.68
VMP1-214ENST00000592106 FOXD4L6Q3SYB3 417 aaPredicted RBP10.79□□□□□ -0.68
VMP1-214ENST00000592106 ZNF667Q5HYK9 610 aa10.79□□□□□ -0.68
VMP1-214ENST00000592106 RESP18Q5W5W9 173 aa10.79□□□□□ -0.68
VMP1-214ENST00000592106 PKN3Q6P5Z2 889 aa10.79□□□□□ -0.68
VMP1-214ENST00000592106 FOXD4L3Q6VB84 417 aaPredicted RBP10.79□□□□□ -0.68
VMP1-214ENST00000592106 SYT13Q7L8C5 426 aa10.79□□□□□ -0.68
VMP1-214ENST00000592106 B3GALNT2Q8NCR0 500 aa10.79□□□□□ -0.68
VMP1-214ENST00000592106 OVCA2Q8WZ82 227 aa10.79□□□□□ -0.68
VMP1-214ENST00000592106 HHIPQ96QV1 700 aa10.79□□□□□ -0.68
VMP1-214ENST00000592106 SLC22A12Q96S37 553 aa10.79□□□□□ -0.68
VMP1-214ENST00000592106 CYP2S1Q96SQ9 504 aa10.79□□□□□ -0.68
VMP1-214ENST00000592106 MRPL45Q9BRJ2 306 aaKnown RBP10.79□□□□□ -0.68
VMP1-214ENST00000592106 MED10Q9BTT4 135 aa10.79□□□□□ -0.68
VMP1-214ENST00000592106 ADAM33Q9BZ11 813 aa10.79□□□□□ -0.68
VMP1-214ENST00000592106 DNAI2Q9GZS0 605 aa10.79□□□□□ -0.68
VMP1-214ENST00000592106 BLZF1Q9H2G9 400 aa10.79□□□□□ -0.68
VMP1-214ENST00000592106 VRTNQ9H8Y1 702 aa10.79□□□□□ -0.68
VMP1-214ENST00000592106 SLC39A2Q9NP94 309 aa10.79□□□□□ -0.68
VMP1-214ENST00000592106 OTOL1A6NHN0 477 aaPredicted RBP10.78□□□□□ -0.68
VMP1-214ENST00000592106 ADH1CP00326 375 aa10.78□□□□□ -0.68
VMP1-214ENST00000592106 CST3P01034 146 aaPredicted RBP10.78□□□□□ -0.68
VMP1-214ENST00000592106 MYL1P05976 194 aa10.78□□□□□ -0.68
VMP1-214ENST00000592106 MBL2P11226 248 aaPredicted RBP10.78□□□□□ -0.68
VMP1-214ENST00000592106 YWHAQP27348 245 aa10.78□□□□□ -0.68
VMP1-214ENST00000592106 MLLT3P42568 568 aaPredicted RBP10.78□□□□□ -0.68
VMP1-214ENST00000592106 LIMK1P53667 647 aa10.78□□□□□ -0.68
VMP1-214ENST00000592106 MYL6P60660 151 aa10.78□□□□□ -0.68
VMP1-214ENST00000592106 PREPLQ4J6C6 727 aaPredicted RBP10.78□□□□□ -0.68
VMP1-214ENST00000592106 SCARA3Q6AZY7 606 aa10.78□□□□□ -0.68
VMP1-214ENST00000592106 NUP93Q8N1F7 819 aa10.78□□□□□ -0.68
VMP1-214ENST00000592106 TSTD1Q8NFU3 115 aa10.78□□□□□ -0.68
VMP1-214ENST00000592106 FBXO32Q969P5 355 aa10.78□□□□□ -0.68
VMP1-214ENST00000592106 ARRDC1-AS1Q9H2J1 176 aa10.78□□□□□ -0.68
VMP1-214ENST00000592106 DMAP1Q9NPF5 467 aaPredicted RBP10.78□□□□□ -0.68
VMP1-214ENST00000592106 C2orf42Q9NWW7 574 aa10.78□□□□□ -0.68
VMP1-214ENST00000592106 TBC1D14Q9P2M4 693 aa10.78□□□□□ -0.68
VMP1-214ENST00000592106 USP25Q9UHP3 1055 aa10.78□□□□□ -0.68
VMP1-214ENST00000592106 PCDHA7Q9UN72 937 aa10.78□□□□□ -0.68
VMP1-214ENST00000592106 CPQQ9Y646 472 aa10.78□□□□□ -0.68
VMP1-214ENST00000592106 SPTBN4Q9H254 2564 aa10.78□□□□□ -0.68
VMP1-214ENST00000592106 PTPRDP23468 1912 aa10.78□□□□□ -0.68
VMP1-214ENST00000592106 ANAPC1Q9H1A4 1944 aa10.78□□□□□ -0.68
VMP1-214ENST00000592106 EP300Q09472 2414 aaPredicted RBP10.77□□□□□ -0.68
VMP1-214ENST00000592106 DCDC2BA2VCK2 349 aa10.77□□□□□ -0.69
VMP1-214ENST00000592106 ZNF840PA6NDX5 716 aa10.77□□□□□ -0.69
VMP1-214ENST00000592106 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.77□□□□□ -0.69
VMP1-214ENST00000592106 MAP3K7O43318 606 aa10.77□□□□□ -0.69
VMP1-214ENST00000592106 ALDH1A2O94788 518 aa10.77□□□□□ -0.69
VMP1-214ENST00000592106 OLFM2O95897 454 aa10.77□□□□□ -0.69
VMP1-214ENST00000592106 OAS1P00973 400 aaKnown RBP10.77□□□□□ -0.69
VMP1-214ENST00000592106 APODP05090 189 aa10.77□□□□□ -0.69
VMP1-214ENST00000592106 SLFN14P0C7P3 912 aa10.77□□□□□ -0.69
VMP1-214ENST00000592106 ZNF806P0C7X5 589 aa10.77□□□□□ -0.69
VMP1-214ENST00000592106 EIF2DP41214 584 aaKnown RBP10.77□□□□□ -0.69
VMP1-214ENST00000592106 PXNP49023 591 aaPredicted RBP10.77□□□□□ -0.69
VMP1-214ENST00000592106 DGKEP52429 567 aa10.77□□□□□ -0.69
VMP1-214ENST00000592106 USP46P62068 366 aa10.77□□□□□ -0.69
VMP1-214ENST00000592106 TAF10Q12962 218 aa10.77□□□□□ -0.69
VMP1-214ENST00000592106 CUL4BQ13620 913 aa10.77□□□□□ -0.69
VMP1-214ENST00000592106 NCOA4Q13772 614 aa10.77□□□□□ -0.69
VMP1-214ENST00000592106 HSF5Q4G112 596 aaPredicted RBP10.77□□□□□ -0.69
VMP1-214ENST00000592106 PPM1JQ5JR12 505 aa10.77□□□□□ -0.69
VMP1-214ENST00000592106 NUDT18Q6ZVK8 323 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms