RNA–Protein interactions for RNA: ENST00000589940.5

CXXC1-212, Transcript of CXXC finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene CXXC1, Length 2,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-212ENST00000589940 LINC00271P0C7V0 271 aa18.33■□□□□ 0.52
CXXC1-212ENST00000589940 CPB1P15086 417 aa18.33■□□□□ 0.52
CXXC1-212ENST00000589940 CYP2F1P24903 491 aa18.33■□□□□ 0.52
CXXC1-212ENST00000589940 TKTL1P51854 596 aa18.33■□□□□ 0.52
CXXC1-212ENST00000589940 SMARCB1Q12824 385 aa18.33■□□□□ 0.52
CXXC1-212ENST00000589940 GPR17Q13304 367 aa18.33■□□□□ 0.52
CXXC1-212ENST00000589940 PSMD5Q16401 504 aa18.33■□□□□ 0.52
CXXC1-212ENST00000589940 RASIP1Q5U651 963 aa18.33■□□□□ 0.52
CXXC1-212ENST00000589940 SLC26A9Q7LBE3 791 aa18.33■□□□□ 0.52
CXXC1-212ENST00000589940 DDX53Q86TM3 631 aaKnown RBP18.33■□□□□ 0.52
CXXC1-212ENST00000589940 UBL4BQ8N7F7 174 aa18.33■□□□□ 0.52
CXXC1-212ENST00000589940 SP7Q8TDD2 431 aaPredicted RBP18.33■□□□□ 0.52
CXXC1-212ENST00000589940 CLEC4CQ8WTT0 213 aa18.33■□□□□ 0.52
CXXC1-212ENST00000589940 BACE2Q9Y5Z0 518 aa18.33■□□□□ 0.52
CXXC1-212ENST00000589940 PTPRDP23468 1912 aa18.32■□□□□ 0.52
CXXC1-212ENST00000589940 ZNF185O15231 689 aa18.32■□□□□ 0.52
CXXC1-212ENST00000589940 TLL1O43897 1013 aa18.32■□□□□ 0.52
CXXC1-212ENST00000589940 FBXO21O94952 628 aa18.32■□□□□ 0.52
CXXC1-212ENST00000589940 CTNNA1P35221 906 aaKnown RBP18.32■□□□□ 0.52
CXXC1-212ENST00000589940 RABGGTBP53611 331 aa18.32■□□□□ 0.52
CXXC1-212ENST00000589940 RNASE9P60153 205 aaKnown RBP18.32■□□□□ 0.52
CXXC1-212ENST00000589940 ADCY1Q08828 1119 aa18.32■□□□□ 0.52
CXXC1-212ENST00000589940 TAF5Q15542 800 aa18.32■□□□□ 0.52
CXXC1-212ENST00000589940 GPRIN1Q7Z2K8 1008 aa18.32■□□□□ 0.52
CXXC1-212ENST00000589940 KHSRPQ92945 711 aaKnown RBP eCLIP18.32■□□□□ 0.52
CXXC1-212ENST00000589940 CCDC66A2RUB6 948 aa18.31■□□□□ 0.52
CXXC1-212ENST00000589940 C2CD4BA6NLJ0 364 aa18.31■□□□□ 0.52
CXXC1-212ENST00000589940 F8VP50 259 aa18.31■□□□□ 0.52
CXXC1-212ENST00000589940 CES2O00748 559 aa18.31■□□□□ 0.52
CXXC1-212ENST00000589940 GRAP2O75791 330 aa18.31■□□□□ 0.52
CXXC1-212ENST00000589940 PSMA2P25787 234 aa18.31■□□□□ 0.52
CXXC1-212ENST00000589940 CTNNA2P26232 953 aa18.31■□□□□ 0.52
CXXC1-212ENST00000589940 GLUD2P49448 558 aa18.31■□□□□ 0.52
CXXC1-212ENST00000589940 ARPP19P56211 112 aa18.31■□□□□ 0.52
CXXC1-212ENST00000589940 DSG1Q02413 1049 aa18.31■□□□□ 0.52
CXXC1-212ENST00000589940 SLC8B1Q6J4K2 584 aa18.31■□□□□ 0.52
CXXC1-212ENST00000589940 VSTM1Q6UX27 236 aa18.31■□□□□ 0.52
CXXC1-212ENST00000589940 ARCQ7LC44 396 aa18.31■□□□□ 0.52
CXXC1-212ENST00000589940 FBXO22Q8NEZ5 403 aa18.31■□□□□ 0.52
CXXC1-212ENST00000589940 KRT35Q92764 455 aa18.31■□□□□ 0.52
CXXC1-212ENST00000589940 STK39Q9UEW8 545 aa18.31■□□□□ 0.52
CXXC1-212ENST00000589940 CDY1Q9Y6F8 540 aa18.31■□□□□ 0.52
CXXC1-212ENST00000589940 FLT3P36888 993 aa18.31■□□□□ 0.52
CXXC1-212ENST00000589940 GRIK1P39086 918 aa18.31■□□□□ 0.52
CXXC1-212ENST00000589940 MAGEA11P43364 429 aa18.31■□□□□ 0.52
CXXC1-212ENST00000589940 NDUFV1P49821 464 aa18.31■□□□□ 0.52
CXXC1-212ENST00000589940 ZNF143P52747 638 aaPredicted RBP18.31■□□□□ 0.52
CXXC1-212ENST00000589940 MRPS5P82675 430 aaKnown RBP18.31■□□□□ 0.52
CXXC1-212ENST00000589940 EFHC1Q5JVL4 640 aa18.31■□□□□ 0.52
CXXC1-212ENST00000589940 CREG2Q8IUH2 290 aa18.31■□□□□ 0.52
CXXC1-212ENST00000589940 PBKQ96KB5 322 aa18.31■□□□□ 0.52
CXXC1-212ENST00000589940 CAPZA3Q96KX2 299 aa18.31■□□□□ 0.52
CXXC1-212ENST00000589940 PGLYRP2Q96PD5 576 aa18.31■□□□□ 0.52
CXXC1-212ENST00000589940 CNGB3Q9NQW8 809 aa18.31■□□□□ 0.52
CXXC1-212ENST00000589940 USTQ9Y2C2 406 aa18.31■□□□□ 0.52
CXXC1-212ENST00000589940 PCDHA3Q9Y5H8 950 aa18.31■□□□□ 0.52
CXXC1-212ENST00000589940 PDGFRAP16234 1089 aa18.3■□□□□ 0.52
CXXC1-212ENST00000589940 GPD1P21695 349 aa18.3■□□□□ 0.52
CXXC1-212ENST00000589940 PEX5P50542 639 aa18.3■□□□□ 0.52
CXXC1-212ENST00000589940 ATAD1Q8NBU5 361 aa18.3■□□□□ 0.52
CXXC1-212ENST00000589940 SPPL2BQ8TCT7 592 aa18.3■□□□□ 0.52
CXXC1-212ENST00000589940 C2orf15Q8WU43 125 aaKnown RBP18.3■□□□□ 0.52
CXXC1-212ENST00000589940 RXFP2Q8WXD0 754 aa18.3■□□□□ 0.52
CXXC1-212ENST00000589940 ALG3Q92685 438 aa18.3■□□□□ 0.52
CXXC1-212ENST00000589940 ULBP1Q9BZM6 244 aa18.3■□□□□ 0.52
CXXC1-212ENST00000589940 NR2E3Q9Y5X4 410 aa18.3■□□□□ 0.52
CXXC1-212ENST00000589940 KIAA1671Q9BY89 1806 aa18.3■□□□□ 0.52
CXXC1-212ENST00000589940 MTMR11A4FU01 709 aa18.3■□□□□ 0.52
CXXC1-212ENST00000589940 C2CD2LO14523 706 aa18.3■□□□□ 0.52
CXXC1-212ENST00000589940 SART1O43290 800 aaKnown RBP18.3■□□□□ 0.52
CXXC1-212ENST00000589940 HSF2BPO75031 334 aa18.3■□□□□ 0.52
CXXC1-212ENST00000589940 SLU7O95391 586 aaKnown RBP18.3■□□□□ 0.52
CXXC1-212ENST00000589940 MARCKSL1P49006 195 aa18.3■□□□□ 0.52
CXXC1-212ENST00000589940 KRT17Q04695 432 aa18.3■□□□□ 0.52
CXXC1-212ENST00000589940 ACAP1Q15027 740 aa18.3■□□□□ 0.52
CXXC1-212ENST00000589940 DAB2IPQ5VWQ8 1189 aa18.3■□□□□ 0.52
CXXC1-212ENST00000589940 TRNP1Q6NT89 227 aa18.3■□□□□ 0.52
CXXC1-212ENST00000589940 CNPY3Q9BT09 278 aa18.3■□□□□ 0.52
CXXC1-212ENST00000589940 CARD6Q9BX69 1037 aa18.3■□□□□ 0.52
CXXC1-212ENST00000589940 CARD9Q9H257 536 aa18.3■□□□□ 0.52
CXXC1-212ENST00000589940 RNF14Q9UBS8 474 aa18.3■□□□□ 0.52
CXXC1-212ENST00000589940 DPYSL4O14531 572 aa18.29■□□□□ 0.52
CXXC1-212ENST00000589940 TRIM66O15016 1216 aa18.29■□□□□ 0.52
CXXC1-212ENST00000589940 PSTPIP1O43586 416 aa18.29■□□□□ 0.52
CXXC1-212ENST00000589940 FGF18O76093 207 aa18.29■□□□□ 0.52
CXXC1-212ENST00000589940 URODP06132 367 aa18.29■□□□□ 0.52
CXXC1-212ENST00000589940 CC2D1AQ6P1N0 951 aaPredicted RBP18.29■□□□□ 0.52
CXXC1-212ENST00000589940 RNF19BQ6ZMZ0 732 aa18.29■□□□□ 0.52
CXXC1-212ENST00000589940 SCN4BQ8IWT1 228 aa18.29■□□□□ 0.52
CXXC1-212ENST00000589940 VPS52Q8N1B4 723 aa18.29■□□□□ 0.52
CXXC1-212ENST00000589940 CEP112Q8N8E3 955 aa18.29■□□□□ 0.52
CXXC1-212ENST00000589940 C8orf48Q96LL4 319 aa18.29■□□□□ 0.52
CXXC1-212ENST00000589940 ASNSD1Q9NWL6 643 aa18.29■□□□□ 0.52
CXXC1-212ENST00000589940 LCHNA4D1U4 455 aa18.29■□□□□ 0.52
CXXC1-212ENST00000589940 ADAM12O43184 909 aa18.29■□□□□ 0.52
CXXC1-212ENST00000589940 ZBED1O96006 694 aa18.29■□□□□ 0.52
CXXC1-212ENST00000589940 GLI1P08151 1106 aa18.29■□□□□ 0.52
CXXC1-212ENST00000589940 RPL17P18621 184 aaKnown RBP18.29■□□□□ 0.52
CXXC1-212ENST00000589940 OR1D2P34982 312 aa18.29■□□□□ 0.52
CXXC1-212ENST00000589940 DAOAP59103 153 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms