RNA–Protein interactions for RNA: ENST00000583649.1

CASC3-208, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-208ENST00000583649 SLC6A11P48066 632 aa11.92□□□□□ -0.5
CASC3-208ENST00000583649 GPR15P49685 360 aa11.92□□□□□ -0.5
CASC3-208ENST00000583649 FXR2P51116 673 aaKnown RBP eCLIP11.92□□□□□ -0.5
CASC3-208ENST00000583649 E2F5Q15329 346 aa11.92□□□□□ -0.5
CASC3-208ENST00000583649 SMAD1Q15797 465 aaKnown RBP11.92□□□□□ -0.5
CASC3-208ENST00000583649 CFAP221Q4G0U5 840 aa11.92□□□□□ -0.5
CASC3-208ENST00000583649 C10orf76Q5T2E6 689 aa11.92□□□□□ -0.5
CASC3-208ENST00000583649 EMC10Q5UCC4 262 aa11.92□□□□□ -0.5
CASC3-208ENST00000583649 SDHAF4Q5VUM1 108 aa11.92□□□□□ -0.5
CASC3-208ENST00000583649 TMEM86AQ8N2M4 240 aa11.92□□□□□ -0.5
CASC3-208ENST00000583649 KCTD17Q8N5Z5 321 aa11.92□□□□□ -0.5
CASC3-208ENST00000583649 CADM4Q8NFZ8 388 aa11.92□□□□□ -0.5
CASC3-208ENST00000583649 CRELD1Q96HD1 420 aa11.92□□□□□ -0.5
CASC3-208ENST00000583649 DDX43Q9NXZ2 648 aaKnown RBP11.92□□□□□ -0.5
CASC3-208ENST00000583649 DPP3Q9NY33 737 aa11.92□□□□□ -0.5
CASC3-208ENST00000583649 MAST4O15021 2626 aa11.92□□□□□ -0.5
CASC3-208ENST00000583649 KIAA1549LQ6ZVL6 1849 aa11.92□□□□□ -0.5
CASC3-208ENST00000583649 PCDH15Q96QU1 1955 aa11.91□□□□□ -0.5
CASC3-208ENST00000583649 SFI1A8K8P3 1242 aa11.91□□□□□ -0.5
CASC3-208ENST00000583649 PPEF2O14830 753 aa11.91□□□□□ -0.5
CASC3-208ENST00000583649 PFKFB2O60825 505 aa11.91□□□□□ -0.5
CASC3-208ENST00000583649 DKK1O94907 266 aa11.91□□□□□ -0.5
CASC3-208ENST00000583649 ABL1P00519 1130 aa11.91□□□□□ -0.5
CASC3-208ENST00000583649 JUPP14923 745 aa11.91□□□□□ -0.5
CASC3-208ENST00000583649 CYP2F1P24903 491 aa11.91□□□□□ -0.5
CASC3-208ENST00000583649 OXTRP30559 389 aa11.91□□□□□ -0.5
CASC3-208ENST00000583649 LHX1P48742 406 aa11.91□□□□□ -0.5
CASC3-208ENST00000583649 SLC7A9P82251 487 aa11.91□□□□□ -0.5
CASC3-208ENST00000583649 GNL2Q13823 731 aaKnown RBP11.91□□□□□ -0.5
CASC3-208ENST00000583649 TEAD4Q15561 434 aa11.91□□□□□ -0.5
CASC3-208ENST00000583649 MAPRE1Q15691 268 aaKnown RBP11.91□□□□□ -0.5
CASC3-208ENST00000583649 ZC2HC1CQ53FD0 456 aaPredicted RBP11.91□□□□□ -0.5
CASC3-208ENST00000583649 CCDC157Q569K6 752 aa11.91□□□□□ -0.5
CASC3-208ENST00000583649 RINT1Q6NUQ1 792 aa11.91□□□□□ -0.5
CASC3-208ENST00000583649 NT5DC4Q86YG4 428 aa11.91□□□□□ -0.5
CASC3-208ENST00000583649 DAW1Q8N136 415 aa11.91□□□□□ -0.5
CASC3-208ENST00000583649 STKLD1Q8NE28 680 aa11.91□□□□□ -0.5
CASC3-208ENST00000583649 IPO4Q8TEX9 1081 aaKnown RBP11.91□□□□□ -0.5
CASC3-208ENST00000583649 SCFD1Q8WVM8 642 aa11.91□□□□□ -0.5
CASC3-208ENST00000583649 DNASE2BQ8WZ79 361 aa11.91□□□□□ -0.5
CASC3-208ENST00000583649 WBP1Q96G27 269 aa11.91□□□□□ -0.5
CASC3-208ENST00000583649 ARID3AQ99856 593 aa11.91□□□□□ -0.5
CASC3-208ENST00000583649 MYO16Q9Y6X6 1858 aa11.91□□□□□ -0.5
CASC3-208ENST00000583649 ADAMTS9Q9P2N4 1935 aa11.9□□□□□ -0.5
CASC3-208ENST00000583649 PLXND1Q9Y4D7 1925 aa11.9□□□□□ -0.5
CASC3-208ENST00000583649 FAM149AA5PLN7 773 aa11.9□□□□□ -0.5
CASC3-208ENST00000583649 APC2O95996 2303 aa11.9□□□□□ -0.5
CASC3-208ENST00000583649 NTRK1P04629 796 aa11.9□□□□□ -0.5
CASC3-208ENST00000583649 NCAM1P13591 858 aa11.9□□□□□ -0.5
CASC3-208ENST00000583649 CDC25AP30304 524 aa11.9□□□□□ -0.5
CASC3-208ENST00000583649 MAGEA11P43364 429 aa11.9□□□□□ -0.5
CASC3-208ENST00000583649 POU5F1Q01860 360 aaKnown RBP11.9□□□□□ -0.5
CASC3-208ENST00000583649 SEMG2Q02383 582 aa11.9□□□□□ -0.5
CASC3-208ENST00000583649 CAMK2BQ13554 666 aa11.9□□□□□ -0.5
CASC3-208ENST00000583649 STARD3Q14849 445 aa11.9□□□□□ -0.5
CASC3-208ENST00000583649 ZNF174Q15697 407 aa11.9□□□□□ -0.5
CASC3-208ENST00000583649 HLA-BQ31612 363 aa11.9□□□□□ -0.5
CASC3-208ENST00000583649 INTS6LQ5JSJ4 861 aaKnown RBP11.9□□□□□ -0.5
CASC3-208ENST00000583649 SLFN12LQ6IEE8 588 aa11.9□□□□□ -0.5
CASC3-208ENST00000583649 RHBDF2Q6PJF5 856 aa11.9□□□□□ -0.5
CASC3-208ENST00000583649 VSTM1Q6UX27 236 aa11.9□□□□□ -0.5
CASC3-208ENST00000583649 KIAA1324Q6UXG2 1013 aaKnown RBP11.9□□□□□ -0.5
CASC3-208ENST00000583649 DENND5BQ6ZUT9 1274 aa11.9□□□□□ -0.5
CASC3-208ENST00000583649 C1orf186Q6ZWK4 172 aa11.9□□□□□ -0.5
CASC3-208ENST00000583649 LRRC15Q8TF66 581 aa11.9□□□□□ -0.5
CASC3-208ENST00000583649 SPATA17Q96L03 361 aa11.9□□□□□ -0.5
CASC3-208ENST00000583649 SLITRK1Q96PX8 696 aa11.9□□□□□ -0.5
CASC3-208ENST00000583649 XPO6Q96QU8 1125 aaKnown RBP11.9□□□□□ -0.5
CASC3-208ENST00000583649 CFAP97Q9P2B7 532 aa11.9□□□□□ -0.5
CASC3-208ENST00000583649 MAGEC2Q9UBF1 373 aaPredicted RBP11.9□□□□□ -0.5
CASC3-208ENST00000583649 NOL7Q9UMY1 257 aaKnown RBP11.9□□□□□ -0.5
CASC3-208ENST00000583649 SH3BP1Q9Y3L3 701 aa11.9□□□□□ -0.5
CASC3-208ENST00000583649 STARD13Q9Y3M8 1113 aa11.9□□□□□ -0.5
CASC3-208ENST00000583649 CPQQ9Y646 472 aa11.9□□□□□ -0.5
CASC3-208ENST00000583649 PLXNB3Q9ULL4 1909 aa11.9□□□□□ -0.51
CASC3-208ENST00000583649 SHROOM3Q8TF72 1996 aa11.89□□□□□ -0.51
CASC3-208ENST00000583649 E2F8A0AVK6 867 aa11.89□□□□□ -0.51
CASC3-208ENST00000583649 E9PMD0 336 aa11.89□□□□□ -0.51
CASC3-208ENST00000583649 PLK4O00444 970 aa11.89□□□□□ -0.51
CASC3-208ENST00000583649 GFRA2O00451 464 aa11.89□□□□□ -0.51
CASC3-208ENST00000583649 TRIM66O15016 1216 aa11.89□□□□□ -0.51
CASC3-208ENST00000583649 NDUFV2P19404 249 aa11.89□□□□□ -0.51
CASC3-208ENST00000583649 MAOBP27338 520 aa11.89□□□□□ -0.51
CASC3-208ENST00000583649 ITPKBP27987 946 aa11.89□□□□□ -0.51
CASC3-208ENST00000583649 GRIK1P39086 918 aa11.89□□□□□ -0.51
CASC3-208ENST00000583649 AFF3P51826 1226 aaKnown RBP11.89□□□□□ -0.51
CASC3-208ENST00000583649 ZNF132P52740 706 aa11.89□□□□□ -0.51
CASC3-208ENST00000583649 RHDQ02161 417 aa11.89□□□□□ -0.51
CASC3-208ENST00000583649 ECM1Q16610 540 aa11.89□□□□□ -0.51
CASC3-208ENST00000583649 GAB4Q2WGN9 574 aa11.89□□□□□ -0.51
CASC3-208ENST00000583649 ANO4Q32M45 955 aa11.89□□□□□ -0.51
CASC3-208ENST00000583649 BROXQ5VW32 411 aa11.89□□□□□ -0.51
CASC3-208ENST00000583649 DBX2Q6ZNG2 339 aa11.89□□□□□ -0.51
CASC3-208ENST00000583649 ZCCHC9Q8N567 271 aaKnown RBP11.89□□□□□ -0.51
CASC3-208ENST00000583649 TERB1Q8NA31 727 aa11.89□□□□□ -0.51
CASC3-208ENST00000583649 BAHD1Q8TBE0 780 aaPredicted RBP11.89□□□□□ -0.51
CASC3-208ENST00000583649 CACTINQ8WUQ7 758 aaKnown RBP11.89□□□□□ -0.51
CASC3-208ENST00000583649 RUSC1Q9BVN2 902 aa11.89□□□□□ -0.51
CASC3-208ENST00000583649 ZDHHC4Q9NPG8 344 aa11.89□□□□□ -0.51
CASC3-208ENST00000583649 TMLHEQ9NVH6 421 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms