RNA–Protein interactions for RNA: ENST00000583454.1

TSEN54-209, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-209ENST00000583454 DDR2Q16832 855 aa26.39■■□□□ 1.82
TSEN54-209ENST00000583454 CREBRFQ8IUR6 639 aa26.39■■□□□ 1.82
TSEN54-209ENST00000583454 TWNKQ96RR1 684 aa26.39■■□□□ 1.82
TSEN54-209ENST00000583454 ARID3AQ99856 593 aa26.39■■□□□ 1.82
TSEN54-209ENST00000583454 NT5C1AQ9BXI3 368 aa26.39■■□□□ 1.82
TSEN54-209ENST00000583454 CISHQ9NSE2 258 aa26.39■■□□□ 1.82
TSEN54-209ENST00000583454 PRAMEF12O95522 483 aa26.38■■□□□ 1.81
TSEN54-209ENST00000583454 CHRNB1P11230 501 aa26.38■■□□□ 1.81
TSEN54-209ENST00000583454 HMGA1P17096 107 aaKnown RBP26.38■■□□□ 1.81
TSEN54-209ENST00000583454 CD58P19256 250 aa26.38■■□□□ 1.81
TSEN54-209ENST00000583454 FOXK2Q01167 660 aa26.38■■□□□ 1.81
TSEN54-209ENST00000583454 GAS6Q14393 721 aa26.38■■□□□ 1.81
TSEN54-209ENST00000583454 MAN2A1Q16706 1144 aa26.38■■□□□ 1.81
TSEN54-209ENST00000583454 PAQR9Q6ZVX9 377 aa26.38■■□□□ 1.81
TSEN54-209ENST00000583454 FAM200AQ8TCP9 573 aa26.38■■□□□ 1.81
TSEN54-209ENST00000583454 GIPC2Q8TF65 315 aa26.38■■□□□ 1.81
TSEN54-209ENST00000583454 RMDN1Q96DB5 314 aa26.38■■□□□ 1.81
TSEN54-209ENST00000583454 CEP295NLQ96MC4 621 aa26.38■■□□□ 1.81
TSEN54-209ENST00000583454 ATXN3LQ9H3M9 355 aa26.38■■□□□ 1.81
TSEN54-209ENST00000583454 WEE1P30291 646 aa26.37■■□□□ 1.81
TSEN54-209ENST00000583454 LRMPQ12912 555 aa26.37■■□□□ 1.81
TSEN54-209ENST00000583454 ORC1Q13415 861 aa26.37■■□□□ 1.81
TSEN54-209ENST00000583454 GPR158Q5T848 1215 aa26.37■■□□□ 1.81
TSEN54-209ENST00000583454 CDKAL1Q5VV42 579 aa26.37■■□□□ 1.81
TSEN54-209ENST00000583454 NT5C1BQ96P26 610 aa26.37■■□□□ 1.81
TSEN54-209ENST00000583454 ZNF518BQ9C0D4 1074 aa26.37■■□□□ 1.81
TSEN54-209ENST00000583454 ELOVL4Q9GZR5 314 aa26.37■■□□□ 1.81
TSEN54-209ENST00000583454 EPC1Q9H2F5 836 aa26.37■■□□□ 1.81
TSEN54-209ENST00000583454 LMAN1LQ9HAT1 526 aa26.37■■□□□ 1.81
TSEN54-209ENST00000583454 GREB1Q4ZG55 1949 aa26.37■■□□□ 1.81
TSEN54-209ENST00000583454 GTPBP10A4D1E9 387 aaKnown RBP26.36■■□□□ 1.81
TSEN54-209ENST00000583454 KCNJ18B7U540 433 aa26.36■■□□□ 1.81
TSEN54-209ENST00000583454 CLDN5O00501 218 aa26.36■■□□□ 1.81
TSEN54-209ENST00000583454 LETM1O95202 739 aaPredicted RBP26.36■■□□□ 1.81
TSEN54-209ENST00000583454 FGF19O95750 216 aa26.36■■□□□ 1.81
TSEN54-209ENST00000583454 TBXAS1P24557 533 aaPredicted RBP26.36■■□□□ 1.81
TSEN54-209ENST00000583454 EEF1GP26641 437 aaKnown RBP26.36■■□□□ 1.81
TSEN54-209ENST00000583454 SOX9P48436 509 aa26.36■■□□□ 1.81
TSEN54-209ENST00000583454 CYP4F8P98187 520 aa26.36■■□□□ 1.81
TSEN54-209ENST00000583454 KCNJ12Q14500 433 aa26.36■■□□□ 1.81
TSEN54-209ENST00000583454 SKOR2Q2VWA4 1001 aaPredicted RBP26.36■■□□□ 1.81
TSEN54-209ENST00000583454 HSP90AA4PQ58FG1 418 aa26.36■■□□□ 1.81
TSEN54-209ENST00000583454 SDHAF4Q5VUM1 108 aa26.36■■□□□ 1.81
TSEN54-209ENST00000583454 TXNDC11Q6PKC3 985 aa26.36■■□□□ 1.81
TSEN54-209ENST00000583454 ERMP1Q7Z2K6 904 aa26.36■■□□□ 1.81
TSEN54-209ENST00000583454 TMEM150AQ86TG1 271 aa26.36■■□□□ 1.81
TSEN54-209ENST00000583454 SCN4BQ8IWT1 228 aa26.36■■□□□ 1.81
TSEN54-209ENST00000583454 FUKQ8N0W3 1084 aa26.36■■□□□ 1.81
TSEN54-209ENST00000583454 UBR7Q8N806 425 aa26.36■■□□□ 1.81
TSEN54-209ENST00000583454 C12orf29Q8N999 325 aa26.36■■□□□ 1.81
TSEN54-209ENST00000583454 ATRIPQ8WXE1 791 aa26.36■■□□□ 1.81
TSEN54-209ENST00000583454 ZFYVE19Q96K21 471 aa26.36■■□□□ 1.81
TSEN54-209ENST00000583454 SPATA17Q96L03 361 aa26.36■■□□□ 1.81
TSEN54-209ENST00000583454 C8orf48Q96LL4 319 aa26.36■■□□□ 1.81
TSEN54-209ENST00000583454 TUBGCP2Q9BSJ2 902 aa26.36■■□□□ 1.81
TSEN54-209ENST00000583454 IER2Q9BTL4 223 aa26.36■■□□□ 1.81
TSEN54-209ENST00000583454 INTS2Q9H0H0 1204 aaKnown RBP26.36■■□□□ 1.81
TSEN54-209ENST00000583454 TMEM30AQ9NV96 361 aa26.36■■□□□ 1.81
TSEN54-209ENST00000583454 OBP2AQ9NY56 170 aa26.36■■□□□ 1.81
TSEN54-209ENST00000583454 NCOR2Q9Y618 2525 aa26.36■■□□□ 1.81
TSEN54-209ENST00000583454 SLC38A8A6NNN8 435 aa26.35■■□□□ 1.81
TSEN54-209ENST00000583454 NOL4O94818 638 aa26.35■■□□□ 1.81
TSEN54-209ENST00000583454 CSH1P0DML2 217 aa26.35■■□□□ 1.81
TSEN54-209ENST00000583454 CSH2P0DML3 217 aa26.35■■□□□ 1.81
TSEN54-209ENST00000583454 CACNA2D1P54289 1103 aa26.35■■□□□ 1.81
TSEN54-209ENST00000583454 TCP11X2Q5H9J9 407 aa26.35■■□□□ 1.81
TSEN54-209ENST00000583454 MIIPQ5JXC2 388 aa26.35■■□□□ 1.81
TSEN54-209ENST00000583454 MYRFLQ96LU7 910 aa26.35■■□□□ 1.81
TSEN54-209ENST00000583454 DNAI2Q9GZS0 605 aa26.35■■□□□ 1.81
TSEN54-209ENST00000583454 TASP1Q9H6P5 420 aa26.35■■□□□ 1.81
TSEN54-209ENST00000583454 FANCLQ9NW38 375 aa26.35■■□□□ 1.81
TSEN54-209ENST00000583454 ANAPC1Q9H1A4 1944 aa26.35■■□□□ 1.81
TSEN54-209ENST00000583454 TRIM21P19474 475 aaKnown RBP26.34■■□□□ 1.81
TSEN54-209ENST00000583454 GRIK1P39086 918 aa26.34■■□□□ 1.81
TSEN54-209ENST00000583454 RAD23BP54727 409 aa26.34■■□□□ 1.81
TSEN54-209ENST00000583454 YWHAEP62258 255 aaKnown RBP26.34■■□□□ 1.81
TSEN54-209ENST00000583454 MYL5Q02045 173 aa26.34■■□□□ 1.81
TSEN54-209ENST00000583454 TAF12Q16514 161 aa26.34■■□□□ 1.81
TSEN54-209ENST00000583454 VWA3BQ502W6 1294 aa26.34■■□□□ 1.81
TSEN54-209ENST00000583454 FAM35AQ86V20 835 aa26.34■■□□□ 1.81
TSEN54-209ENST00000583454 YAF2Q8IY57 180 aa26.34■■□□□ 1.81
TSEN54-209ENST00000583454 MSANTD3Q96H12 275 aa26.34■■□□□ 1.81
TSEN54-209ENST00000583454 HNRNPABQ99729 332 aaKnown RBP26.34■■□□□ 1.81
TSEN54-209ENST00000583454 HINFPQ9BQA5 517 aa26.34■■□□□ 1.81
TSEN54-209ENST00000583454 FUCA2Q9BTY2 467 aa26.34■■□□□ 1.81
TSEN54-209ENST00000583454 FAM126AQ9BYI3 521 aaPredicted RBP26.34■■□□□ 1.81
TSEN54-209ENST00000583454 NDST4Q9H3R1 872 aa26.34■■□□□ 1.81
TSEN54-209ENST00000583454 GCNT4Q9P109 453 aa26.34■■□□□ 1.81
TSEN54-209ENST00000583454 SMG5Q9UPR3 1016 aaKnown RBP26.34■■□□□ 1.81
TSEN54-209ENST00000583454 ATP8B3O60423 1300 aa26.34■■□□□ 1.81
TSEN54-209ENST00000583454 MYH10P35580 1976 aa26.33■■□□□ 1.81
TSEN54-209ENST00000583454 TRIM66O15016 1216 aa26.33■■□□□ 1.81
TSEN54-209ENST00000583454 CTHP32929 405 aa26.33■■□□□ 1.81
TSEN54-209ENST00000583454 GCNT1Q02742 428 aa26.33■■□□□ 1.81
TSEN54-209ENST00000583454 NCAPHQ15003 741 aa26.33■■□□□ 1.81
TSEN54-209ENST00000583454 ANO6Q4KMQ2 910 aa26.33■■□□□ 1.81
TSEN54-209ENST00000583454 GBP6Q6ZN66 633 aa26.33■■□□□ 1.81
TSEN54-209ENST00000583454 SLC4A11Q8NBS3 891 aa26.33■■□□□ 1.81
TSEN54-209ENST00000583454 SLC2A14Q8TDB8 520 aa26.33■■□□□ 1.81
TSEN54-209ENST00000583454 CSGALNACT1Q8TDX6 532 aa26.33■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms