RNA–Protein interactions for RNA: ENST00000583160.5

COPS3-217, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-217ENST00000583160 PSMD9O00233 223 aa4.98□□□□□ -1.61
COPS3-217ENST00000583160 MYCLP12524 364 aaPredicted RBP4.98□□□□□ -1.61
COPS3-217ENST00000583160 PRKAR1BP31321 381 aa4.98□□□□□ -1.61
COPS3-217ENST00000583160 RENBPP51606 427 aa4.98□□□□□ -1.61
COPS3-217ENST00000583160 ALDH5A1P51649 535 aaPredicted RBP4.98□□□□□ -1.61
COPS3-217ENST00000583160 KLF9Q13886 244 aaPredicted RBP4.98□□□□□ -1.61
COPS3-217ENST00000583160 CCNIQ14094 377 aa4.98□□□□□ -1.61
COPS3-217ENST00000583160 MLC1Q15049 377 aa4.98□□□□□ -1.61
COPS3-217ENST00000583160 ETFDHQ16134 617 aa4.98□□□□□ -1.61
COPS3-217ENST00000583160 PLEKHG6Q3KR16 790 aa4.98□□□□□ -1.61
COPS3-217ENST00000583160 MINDY4Q4G0A6 757 aa4.98□□□□□ -1.61
COPS3-217ENST00000583160 RNASE12Q5GAN4 147 aaKnown RBP4.98□□□□□ -1.61
COPS3-217ENST00000583160 CERCAMQ5T4B2 595 aa4.98□□□□□ -1.61
COPS3-217ENST00000583160 FAM102BQ5T8I3 360 aa4.98□□□□□ -1.61
COPS3-217ENST00000583160 MORN5Q5VZ52 161 aa4.98□□□□□ -1.61
COPS3-217ENST00000583160 SLC2A7Q6PXP3 512 aa4.98□□□□□ -1.61
COPS3-217ENST00000583160 SERPINA13PQ6UXR4 307 aa4.98□□□□□ -1.61
COPS3-217ENST00000583160 SIRT6Q8N6T7 355 aa4.98□□□□□ -1.61
COPS3-217ENST00000583160 OR56A3Q8NH54 315 aa4.98□□□□□ -1.61
COPS3-217ENST00000583160 SPSB4Q96A44 273 aa4.98□□□□□ -1.61
COPS3-217ENST00000583160 NAF1Q96HR8 494 aaKnown RBP4.98□□□□□ -1.61
COPS3-217ENST00000583160 PPP1R9BQ96SB3 815 aa4.98□□□□□ -1.61
COPS3-217ENST00000583160 SACM1LQ9NTJ5 587 aa4.98□□□□□ -1.61
COPS3-217ENST00000583160 TFCP2L1Q9NZI6 479 aa4.98□□□□□ -1.61
COPS3-217ENST00000583160 AMFRQ9UKV5 643 aa4.98□□□□□ -1.61
COPS3-217ENST00000583160 L1RE1Q9UN81 338 aa4.98□□□□□ -1.61
COPS3-217ENST00000583160 PAXBP1Q9Y5B6 917 aa4.98□□□□□ -1.61
COPS3-217ENST00000583160 SMIM35A0A1B0GVV1 85 aa4.97□□□□□ -1.61
COPS3-217ENST00000583160 CFAP69A5D8W1 941 aa4.97□□□□□ -1.61
COPS3-217ENST00000583160 FAM227AF5H4B4 570 aa4.97□□□□□ -1.61
COPS3-217ENST00000583160 CES2O00748 559 aa4.97□□□□□ -1.61
COPS3-217ENST00000583160 PMPCBO75439 489 aa4.97□□□□□ -1.61
COPS3-217ENST00000583160 SCGB1D2O95969 90 aa4.97□□□□□ -1.61
COPS3-217ENST00000583160 FGAP02671 866 aa4.97□□□□□ -1.61
COPS3-217ENST00000583160 GKP32189 559 aa4.97□□□□□ -1.61
COPS3-217ENST00000583160 BCAT1P54687 386 aa4.97□□□□□ -1.61
COPS3-217ENST00000583160 PPP2R5AQ15172 486 aa4.97□□□□□ -1.61
COPS3-217ENST00000583160 NFE2Q16621 373 aaPredicted RBP4.97□□□□□ -1.61
COPS3-217ENST00000583160 INSCQ1MX18 579 aa4.97□□□□□ -1.61
COPS3-217ENST00000583160 APOA5Q6Q788 366 aa4.97□□□□□ -1.61
COPS3-217ENST00000583160 MICU3Q86XE3 530 aa4.97□□□□□ -1.61
COPS3-217ENST00000583160 GALNT16Q8N428 558 aa4.97□□□□□ -1.61
COPS3-217ENST00000583160 DNAJB14Q8TBM8 379 aa4.97□□□□□ -1.61
COPS3-217ENST00000583160 PDGFCQ9NRA1 345 aa4.97□□□□□ -1.61
COPS3-217ENST00000583160 C1orf112Q9NSG2 853 aa4.97□□□□□ -1.61
COPS3-217ENST00000583160 STK32BQ9NY57 414 aa4.97□□□□□ -1.61
COPS3-217ENST00000583160 TPCN1Q9ULQ1 816 aa4.97□□□□□ -1.61
COPS3-217ENST00000583160 USP22Q9UPT9 525 aa4.97□□□□□ -1.61
COPS3-217ENST00000583160 DRG1Q9Y295 367 aaKnown RBP4.97□□□□□ -1.61
COPS3-217ENST00000583160 CDY1Q9Y6F8 540 aa4.97□□□□□ -1.61
COPS3-217ENST00000583160 TCRBV5S1A1TA0A578 114 aa4.96□□□□□ -1.62
COPS3-217ENST00000583160 TRIM43BA6NCK2 446 aa4.96□□□□□ -1.62
COPS3-217ENST00000583160 KCNU1A8MYU2 1149 aa4.96□□□□□ -1.62
COPS3-217ENST00000583160 UBE2Q2LH0YL09 131 aa4.96□□□□□ -1.62
COPS3-217ENST00000583160 PYCARD-AS1I3L0S3 204 aa4.96□□□□□ -1.62
COPS3-217ENST00000583160 RGS10O43665 173 aa4.96□□□□□ -1.62
COPS3-217ENST00000583160 SRGAP2O75044 1071 aa4.96□□□□□ -1.62
COPS3-217ENST00000583160 RASSF9O75901 435 aa4.96□□□□□ -1.62
COPS3-217ENST00000583160 RASAL1O95294 804 aa4.96□□□□□ -1.62
COPS3-217ENST00000583160 BRAFP15056 766 aa4.96□□□□□ -1.62
COPS3-217ENST00000583160 ZKSCAN1P17029 563 aaPredicted RBP4.96□□□□□ -1.62
COPS3-217ENST00000583160 SFPQP23246 707 aaKnown RBP eCLIP4.96□□□□□ -1.62
COPS3-217ENST00000583160 SUMO2P61956 95 aaKnown RBP4.96□□□□□ -1.62
COPS3-217ENST00000583160 PSG6Q00889 435 aa4.96□□□□□ -1.62
COPS3-217ENST00000583160 DAZAP2Q15038 168 aaPredicted RBP4.96□□□□□ -1.62
COPS3-217ENST00000583160 CERKLQ49MI3 558 aaPredicted RBP4.96□□□□□ -1.62
COPS3-217ENST00000583160 ARHGAP29Q52LW3 1261 aa4.96□□□□□ -1.62
COPS3-217ENST00000583160 CACHD1Q5VU97 1274 aa4.96□□□□□ -1.62
COPS3-217ENST00000583160 MIS18BP1Q6P0N0 1132 aa4.96□□□□□ -1.62
COPS3-217ENST00000583160 KCTD20Q7Z5Y7 419 aa4.96□□□□□ -1.62
COPS3-217ENST00000583160 RAB11FIP4Q86YS3 637 aa4.96□□□□□ -1.62
COPS3-217ENST00000583160 CNGA4Q8IV77 575 aa4.96□□□□□ -1.62
COPS3-217ENST00000583160 MAGEB6Q8N7X4 407 aa4.96□□□□□ -1.62
COPS3-217ENST00000583160 DENND1AQ8TEH3 1009 aa4.96□□□□□ -1.62
COPS3-217ENST00000583160 TRIM43Q96BQ3 446 aaPredicted RBP4.96□□□□□ -1.62
COPS3-217ENST00000583160 NMD3Q96D46 503 aaKnown RBP4.96□□□□□ -1.62
COPS3-217ENST00000583160 STK31Q9BXU1 1019 aa4.96□□□□□ -1.62
COPS3-217ENST00000583160 TRIM5Q9C035 493 aa4.96□□□□□ -1.62
COPS3-217ENST00000583160 DNMT3BQ9UBC3 853 aaKnown RBP4.96□□□□□ -1.62
COPS3-217ENST00000583160 WDR17Q8IZU2 1322 aa4.96□□□□□ -1.62
COPS3-217ENST00000583160 CYP2D7A0A087X1C5 515 aa4.95□□□□□ -1.62
COPS3-217ENST00000583160 LOC102723971A0A1B0GUV8 181 aa4.95□□□□□ -1.62
COPS3-217ENST00000583160 MBD3L4A6NDZ8 208 aaPredicted RBP4.95□□□□□ -1.62
COPS3-217ENST00000583160 MBD3L3A6NE82 208 aaPredicted RBP4.95□□□□□ -1.62
COPS3-217ENST00000583160 ISM1B1AKI9 464 aa4.95□□□□□ -1.62
COPS3-217ENST00000583160 H7C4K7 107 aa4.95□□□□□ -1.62
COPS3-217ENST00000583160 S100BP04271 92 aaPredicted RBP4.95□□□□□ -1.62
COPS3-217ENST00000583160 CHRM5P08912 532 aaPredicted RBP4.95□□□□□ -1.62
COPS3-217ENST00000583160 CYP2A6P11509 494 aaPredicted RBP4.95□□□□□ -1.62
COPS3-217ENST00000583160 EPHA3P29320 983 aa4.95□□□□□ -1.62
COPS3-217ENST00000583160 UQCRC1P31930 480 aa4.95□□□□□ -1.62
COPS3-217ENST00000583160 PTGER1P34995 402 aa4.95□□□□□ -1.62
COPS3-217ENST00000583160 ARHGAP25P42331 645 aa4.95□□□□□ -1.62
COPS3-217ENST00000583160 CNGA2Q16280 664 aa4.95□□□□□ -1.62
COPS3-217ENST00000583160 FAM187BQ17R55 369 aa4.95□□□□□ -1.62
COPS3-217ENST00000583160 C3orf38Q5JPI3 329 aa4.95□□□□□ -1.62
COPS3-217ENST00000583160 NXNQ6DKJ4 435 aa4.95□□□□□ -1.62
COPS3-217ENST00000583160 BCDIN3DQ7Z5W3 292 aaKnown RBP4.95□□□□□ -1.62
COPS3-217ENST00000583160 SFTPA1Q8IWL2 248 aa4.95□□□□□ -1.62
COPS3-217ENST00000583160 TCEAL8Q8IYN2 117 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms