RNA–Protein interactions for RNA: ENST00000581655.1

CSNK1D-218, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-218ENST00000581655 ERLEC1Q96DZ1 483 aa13.48□□□□□ -0.25
CSNK1D-218ENST00000581655 MMTAG2Q9BU76 263 aaKnown RBP13.48□□□□□ -0.25
CSNK1D-218ENST00000581655 RAB34Q9BZG1 259 aa13.48□□□□□ -0.25
CSNK1D-218ENST00000581655 SMPD4Q9NXE4 827 aa13.48□□□□□ -0.25
CSNK1D-218ENST00000581655 TOR4AQ9NXH8 423 aa13.48□□□□□ -0.25
CSNK1D-218ENST00000581655 DDX43Q9NXZ2 648 aaKnown RBP13.48□□□□□ -0.25
CSNK1D-218ENST00000581655 LARSQ9P2J5 1176 aaKnown RBP13.48□□□□□ -0.25
CSNK1D-218ENST00000581655 C2CD2Q9Y426 696 aa13.48□□□□□ -0.25
CSNK1D-218ENST00000581655 HECTD1Q9ULT8 2610 aa13.47□□□□□ -0.25
CSNK1D-218ENST00000581655 MYO18BQ8IUG5 2567 aa13.47□□□□□ -0.25
CSNK1D-218ENST00000581655 NPHP3-ACAD11A0A0J9YXS1 232 aa13.47□□□□□ -0.25
CSNK1D-218ENST00000581655 TBC1D3BA6NDS4 549 aa13.47□□□□□ -0.25
CSNK1D-218ENST00000581655 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.47□□□□□ -0.25
CSNK1D-218ENST00000581655 SLC9A3R1O14745 358 aaPredicted RBP13.47□□□□□ -0.25
CSNK1D-218ENST00000581655 ATXN7O15265 892 aaPredicted RBP13.47□□□□□ -0.25
CSNK1D-218ENST00000581655 ZNF217O75362 1048 aa13.47□□□□□ -0.25
CSNK1D-218ENST00000581655 ADH1CP00326 375 aa13.47□□□□□ -0.25
CSNK1D-218ENST00000581655 ATXN1LP0C7T5 689 aaKnown RBP13.47□□□□□ -0.25
CSNK1D-218ENST00000581655 NDUFV2P19404 249 aa13.47□□□□□ -0.25
CSNK1D-218ENST00000581655 CAMK2BQ13554 666 aa13.47□□□□□ -0.25
CSNK1D-218ENST00000581655 SLC39A4Q6P5W5 647 aa13.47□□□□□ -0.25
CSNK1D-218ENST00000581655 TRMT11Q7Z4G4 463 aaKnown RBP13.47□□□□□ -0.25
CSNK1D-218ENST00000581655 SPATA2LQ8IUW3 424 aaPredicted RBP13.47□□□□□ -0.25
CSNK1D-218ENST00000581655 PHTF2Q8N3S3 785 aa13.47□□□□□ -0.25
CSNK1D-218ENST00000581655 SYT2Q8N9I0 419 aaPredicted RBP13.47□□□□□ -0.25
CSNK1D-218ENST00000581655 ZNF419Q96HQ0 510 aaPredicted RBP13.47□□□□□ -0.25
CSNK1D-218ENST00000581655 PKMYT1Q99640 499 aa13.47□□□□□ -0.25
CSNK1D-218ENST00000581655 ACBD6Q9BR61 282 aa13.47□□□□□ -0.25
CSNK1D-218ENST00000581655 ZDHHC5Q9C0B5 715 aa13.47□□□□□ -0.25
CSNK1D-218ENST00000581655 PRDM16Q9HAZ2 1276 aa13.47□□□□□ -0.25
CSNK1D-218ENST00000581655 CD93Q9NPY3 652 aa13.47□□□□□ -0.25
CSNK1D-218ENST00000581655 L1RE1Q9UN81 338 aa13.47□□□□□ -0.25
CSNK1D-218ENST00000581655 RAI2Q9Y5P3 530 aa13.47□□□□□ -0.25
CSNK1D-218ENST00000581655 CPQQ9Y646 472 aa13.47□□□□□ -0.25
CSNK1D-218ENST00000581655 SPTA1P02549 2419 aa13.47□□□□□ -0.25
CSNK1D-218ENST00000581655 A0A1W2PQF6 199 aa13.46□□□□□ -0.25
CSNK1D-218ENST00000581655 FAM149AA5PLN7 773 aa13.46□□□□□ -0.25
CSNK1D-218ENST00000581655 GOLGA8CPA6NN73 597 aa13.46□□□□□ -0.25
CSNK1D-218ENST00000581655 NDUFS2O75306 463 aa13.46□□□□□ -0.25
CSNK1D-218ENST00000581655 PFKLP17858 780 aa13.46□□□□□ -0.25
CSNK1D-218ENST00000581655 SLC7A9P82251 487 aa13.46□□□□□ -0.25
CSNK1D-218ENST00000581655 MYL7Q01449 175 aa13.46□□□□□ -0.25
CSNK1D-218ENST00000581655 ANKRD1Q15327 319 aa13.46□□□□□ -0.25
CSNK1D-218ENST00000581655 CFAP221Q4G0U5 840 aa13.46□□□□□ -0.25
CSNK1D-218ENST00000581655 LY6G5CQ5SRR4 150 aa13.46□□□□□ -0.25
CSNK1D-218ENST00000581655 SYCP2LQ5T4T6 812 aa13.46□□□□□ -0.25
CSNK1D-218ENST00000581655 LARP1BQ659C4 914 aaKnown RBP13.46□□□□□ -0.25
CSNK1D-218ENST00000581655 MIB1Q86YT6 1006 aa13.46□□□□□ -0.25
CSNK1D-218ENST00000581655 GALNT15Q8N3T1 639 aa13.46□□□□□ -0.25
CSNK1D-218ENST00000581655 KIAA1958Q8N8K9 716 aa13.46□□□□□ -0.25
CSNK1D-218ENST00000581655 NAT16Q8N8M0 369 aa13.46□□□□□ -0.25
CSNK1D-218ENST00000581655 BAHD1Q8TBE0 780 aaPredicted RBP13.46□□□□□ -0.25
CSNK1D-218ENST00000581655 KCNN1Q92952 543 aa13.46□□□□□ -0.25
CSNK1D-218ENST00000581655 ZNF560Q96MR9 790 aa13.46□□□□□ -0.25
CSNK1D-218ENST00000581655 RNF38Q9H0F5 515 aa13.46□□□□□ -0.25
CSNK1D-218ENST00000581655 IL21RQ9HBE5 538 aa13.46□□□□□ -0.25
CSNK1D-218ENST00000581655 TRPM5Q9NZQ8 1165 aa13.46□□□□□ -0.25
CSNK1D-218ENST00000581655 CFAP97Q9P2B7 532 aa13.46□□□□□ -0.25
CSNK1D-218ENST00000581655 K7ENM7 598 aa13.45□□□□□ -0.26
CSNK1D-218ENST00000581655 ZBTB24O43167 697 aaPredicted RBP13.45□□□□□ -0.26
CSNK1D-218ENST00000581655 HCRTO43612 131 aa13.45□□□□□ -0.26
CSNK1D-218ENST00000581655 HUS1O60921 280 aa13.45□□□□□ -0.26
CSNK1D-218ENST00000581655 DKK1O94907 266 aa13.45□□□□□ -0.26
CSNK1D-218ENST00000581655 ITPKBP27987 946 aa13.45□□□□□ -0.26
CSNK1D-218ENST00000581655 NTSR1P30989 418 aa13.45□□□□□ -0.26
CSNK1D-218ENST00000581655 SLC12A3P55017 1021 aa13.45□□□□□ -0.26
CSNK1D-218ENST00000581655 USP46P62068 366 aa13.45□□□□□ -0.26
CSNK1D-218ENST00000581655 WDR45BQ5MNZ6 344 aa13.45□□□□□ -0.26
CSNK1D-218ENST00000581655 C10orf76Q5T2E6 689 aa13.45□□□□□ -0.26
CSNK1D-218ENST00000581655 OSTM1Q86WC4 334 aa13.45□□□□□ -0.26
CSNK1D-218ENST00000581655 ZNF843Q8N446 348 aa13.45□□□□□ -0.26
CSNK1D-218ENST00000581655 KCNV2Q8TDN2 545 aa13.45□□□□□ -0.26
CSNK1D-218ENST00000581655 FOXJ1Q92949 421 aa13.45□□□□□ -0.26
CSNK1D-218ENST00000581655 FUBP3Q96I24 572 aaKnown RBP eCLIP13.45□□□□□ -0.26
CSNK1D-218ENST00000581655 PLIN2Q99541 437 aa13.45□□□□□ -0.26
CSNK1D-218ENST00000581655 FOXP1Q9H334 677 aaPredicted RBP13.45□□□□□ -0.26
CSNK1D-218ENST00000581655 GAREM1Q9H706 876 aa13.45□□□□□ -0.26
CSNK1D-218ENST00000581655 TM7SF3Q9NS93 570 aa13.45□□□□□ -0.26
CSNK1D-218ENST00000581655 HCN2Q9UL51 889 aa13.45□□□□□ -0.26
CSNK1D-218ENST00000581655 A0A1B0GTW7 788 aa13.44□□□□□ -0.26
CSNK1D-218ENST00000581655 TISP43B9A030 160 aa13.44□□□□□ -0.26
CSNK1D-218ENST00000581655 CILPO75339 1184 aa13.44□□□□□ -0.26
CSNK1D-218ENST00000581655 TULP3O75386 442 aa13.44□□□□□ -0.26
CSNK1D-218ENST00000581655 ABL1P00519 1130 aa13.44□□□□□ -0.26
CSNK1D-218ENST00000581655 POLR2BP30876 1174 aaKnown RBP13.44□□□□□ -0.26
CSNK1D-218ENST00000581655 PNPLA4P41247 253 aa13.44□□□□□ -0.26
CSNK1D-218ENST00000581655 MAGEA11P43364 429 aa13.44□□□□□ -0.26
CSNK1D-218ENST00000581655 TRAPPC10P48553 1259 aa13.44□□□□□ -0.26
CSNK1D-218ENST00000581655 GAD2Q05329 585 aa13.44□□□□□ -0.26
CSNK1D-218ENST00000581655 IL17AQ16552 155 aa13.44□□□□□ -0.26
CSNK1D-218ENST00000581655 EGFLAMQ63HQ2 1017 aa13.44□□□□□ -0.26
CSNK1D-218ENST00000581655 ADALQ6DHV7 355 aa13.44□□□□□ -0.26
CSNK1D-218ENST00000581655 ETFBKMTQ8IXQ9 262 aa13.44□□□□□ -0.26
CSNK1D-218ENST00000581655 ZCCHC9Q8N567 271 aaKnown RBP13.44□□□□□ -0.26
CSNK1D-218ENST00000581655 PDCD7Q8N8D1 485 aaKnown RBP13.44□□□□□ -0.26
CSNK1D-218ENST00000581655 TERB1Q8NA31 727 aa13.44□□□□□ -0.26
CSNK1D-218ENST00000581655 RHBDD1Q8TEB9 315 aa13.44□□□□□ -0.26
CSNK1D-218ENST00000581655 IPO4Q8TEX9 1081 aaKnown RBP13.44□□□□□ -0.26
CSNK1D-218ENST00000581655 C8orf76Q96K31 380 aa13.44□□□□□ -0.26
CSNK1D-218ENST00000581655 CDC6Q99741 560 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms