RNA–Protein interactions for RNA: ENST00000581525.1

SNORD55-201, Transcript of small nucleolar RNA, C/D box 55, humanhuman

BASIC

Gene SNORD55, Length 80 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD55-201ENST00000581525 OAS1P00973 400 aaKnown RBP13.36□□□□□ -0.27
SNORD55-201ENST00000581525 USP17L7P0C7H9 530 aa13.36□□□□□ -0.27
SNORD55-201ENST00000581525 SLC9A1P19634 815 aa13.36□□□□□ -0.27
SNORD55-201ENST00000581525 TUBP50607 506 aa13.36□□□□□ -0.27
SNORD55-201ENST00000581525 PDE6CP51160 858 aa13.36□□□□□ -0.27
SNORD55-201ENST00000581525 MAP3K7CLP57077 242 aa13.36□□□□□ -0.27
SNORD55-201ENST00000581525 LRMPQ12912 555 aa13.36□□□□□ -0.27
SNORD55-201ENST00000581525 TAF10Q12962 218 aa13.36□□□□□ -0.27
SNORD55-201ENST00000581525 NCAPHQ15003 741 aa13.36□□□□□ -0.27
SNORD55-201ENST00000581525 CNGA2Q16280 664 aa13.36□□□□□ -0.27
SNORD55-201ENST00000581525 STX1AQ16623 288 aa13.36□□□□□ -0.27
SNORD55-201ENST00000581525 MEA1Q16626 185 aa13.36□□□□□ -0.27
SNORD55-201ENST00000581525 TPD52L1Q16890 204 aaPredicted RBP13.36□□□□□ -0.27
SNORD55-201ENST00000581525 VWA3BQ502W6 1294 aa13.36□□□□□ -0.27
SNORD55-201ENST00000581525 ZNF394Q53GI3 561 aa13.36□□□□□ -0.27
SNORD55-201ENST00000581525 IER5LQ5T953 404 aa13.36□□□□□ -0.27
SNORD55-201ENST00000581525 TRIM65Q6PJ69 517 aa13.36□□□□□ -0.27
SNORD55-201ENST00000581525 LCLAT1Q6UWP7 414 aa13.36□□□□□ -0.27
SNORD55-201ENST00000581525 TTC30AQ86WT1 665 aa13.36□□□□□ -0.27
SNORD55-201ENST00000581525 ZNF687Q8N1G0 1237 aa13.36□□□□□ -0.27
SNORD55-201ENST00000581525 PPM1KQ8N3J5 372 aa13.36□□□□□ -0.27
SNORD55-201ENST00000581525 ST13P5Q8NFI4 369 aaPredicted RBP13.36□□□□□ -0.27
SNORD55-201ENST00000581525 SCAMP5Q8TAC9 235 aa13.36□□□□□ -0.27
SNORD55-201ENST00000581525 KAT5Q92993 513 aa13.36□□□□□ -0.27
SNORD55-201ENST00000581525 SLITRK1Q96PX8 696 aa13.36□□□□□ -0.27
SNORD55-201ENST00000581525 SLC22A12Q96S37 553 aa13.36□□□□□ -0.27
SNORD55-201ENST00000581525 FAM83CQ9BQN1 747 aa13.36□□□□□ -0.27
SNORD55-201ENST00000581525 FUCA2Q9BTY2 467 aa13.36□□□□□ -0.27
SNORD55-201ENST00000581525 OSBPL6Q9BZF3 934 aa13.36□□□□□ -0.27
SNORD55-201ENST00000581525 SLITRK6Q9H5Y7 841 aa13.36□□□□□ -0.27
SNORD55-201ENST00000581525 SIX2Q9NPC8 291 aa13.36□□□□□ -0.27
SNORD55-201ENST00000581525 ARHGAP26Q9UNA1 814 aa13.36□□□□□ -0.27
SNORD55-201ENST00000581525 SCML2Q9UQR0 700 aa13.36□□□□□ -0.27
SNORD55-201ENST00000581525 NFE2L3Q9Y4A8 694 aa13.36□□□□□ -0.27
SNORD55-201ENST00000581525 C2orf78A6NCI8 922 aa13.35□□□□□ -0.27
SNORD55-201ENST00000581525 KCNJ18B7U540 433 aa13.35□□□□□ -0.27
SNORD55-201ENST00000581525 O00370 1275 aa13.35□□□□□ -0.27
SNORD55-201ENST00000581525 LETM1O95202 739 aaPredicted RBP13.35□□□□□ -0.27
SNORD55-201ENST00000581525 PDGFBP01127 241 aaPredicted RBP13.35□□□□□ -0.27
SNORD55-201ENST00000581525 CFHP08603 1231 aa13.35□□□□□ -0.27
SNORD55-201ENST00000581525 ZNF18P17022 549 aa13.35□□□□□ -0.27
SNORD55-201ENST00000581525 HDCP19113 662 aa13.35□□□□□ -0.27
SNORD55-201ENST00000581525 PTMSP20962 102 aa13.35□□□□□ -0.27
SNORD55-201ENST00000581525 ADORA2BP29275 332 aa13.35□□□□□ -0.27
SNORD55-201ENST00000581525 AVPR2P30518 371 aa13.35□□□□□ -0.27
SNORD55-201ENST00000581525 AVPR1AP37288 418 aa13.35□□□□□ -0.27
SNORD55-201ENST00000581525 MTIF2P46199 727 aaKnown RBP13.35□□□□□ -0.27
SNORD55-201ENST00000581525 RPL34P49207 117 aaKnown RBP13.35□□□□□ -0.27
SNORD55-201ENST00000581525 ZXDBP98169 803 aa13.35□□□□□ -0.27
SNORD55-201ENST00000581525 PLCB2Q00722 1185 aa13.35□□□□□ -0.27
SNORD55-201ENST00000581525 KCNMA1Q12791 1236 aa13.35□□□□□ -0.27
SNORD55-201ENST00000581525 KCNJ12Q14500 433 aa13.35□□□□□ -0.27
SNORD55-201ENST00000581525 STILQ15468 1287 aa13.35□□□□□ -0.27
SNORD55-201ENST00000581525 ARHGAP29Q52LW3 1261 aa13.35□□□□□ -0.27
SNORD55-201ENST00000581525 SGO2Q562F6 1265 aa13.35□□□□□ -0.27
SNORD55-201ENST00000581525 PM20D1Q6GTS8 502 aa13.35□□□□□ -0.27
SNORD55-201ENST00000581525 C11orf57Q6ZUT1 292 aaPredicted RBP13.35□□□□□ -0.27
SNORD55-201ENST00000581525 SCML4Q8N228 414 aa13.35□□□□□ -0.27
SNORD55-201ENST00000581525 BPIFB1Q8TDL5 484 aa13.35□□□□□ -0.27
SNORD55-201ENST00000581525 SHDQ96IW2 340 aa13.35□□□□□ -0.27
SNORD55-201ENST00000581525 CYP2S1Q96SQ9 504 aa13.35□□□□□ -0.27
SNORD55-201ENST00000581525 BPIFA3Q9BQP9 254 aa13.35□□□□□ -0.27
SNORD55-201ENST00000581525 ZSWIM1Q9BR11 485 aa13.35□□□□□ -0.27
SNORD55-201ENST00000581525 RNF38Q9H0F5 515 aa13.35□□□□□ -0.27
SNORD55-201ENST00000581525 HSD3B7Q9H2F3 369 aa13.35□□□□□ -0.27
SNORD55-201ENST00000581525 UBE2TQ9NPD8 197 aaPredicted RBP13.35□□□□□ -0.27
SNORD55-201ENST00000581525 APEX2Q9UBZ4 518 aa13.35□□□□□ -0.27
SNORD55-201ENST00000581525 NUP210Q8TEM1 1887 aaPredicted RBP13.34□□□□□ -0.27
SNORD55-201ENST00000581525 TRAV19A0A0A6YYK7 116 aa13.34□□□□□ -0.27
SNORD55-201ENST00000581525 ZNF263O14978 683 aa13.34□□□□□ -0.27
SNORD55-201ENST00000581525 XPO1O14980 1071 aaKnown RBP13.34□□□□□ -0.27
SNORD55-201ENST00000581525 CLSTN1O94985 981 aa13.34□□□□□ -0.27
SNORD55-201ENST00000581525 AOC1P19801 751 aa13.34□□□□□ -0.27
SNORD55-201ENST00000581525 GDI1P31150 447 aa13.34□□□□□ -0.27
SNORD55-201ENST00000581525 TYRO3Q06418 890 aa13.34□□□□□ -0.27
SNORD55-201ENST00000581525 USP4Q13107 963 aa13.34□□□□□ -0.27
SNORD55-201ENST00000581525 ZNF77Q15935 545 aa13.34□□□□□ -0.27
SNORD55-201ENST00000581525 CWF19L1Q69YN2 538 aaKnown RBP13.34□□□□□ -0.27
SNORD55-201ENST00000581525 ASTLQ6HA08 431 aaPredicted RBP13.34□□□□□ -0.27
SNORD55-201ENST00000581525 KLHDC10Q6PID8 442 aa13.34□□□□□ -0.27
SNORD55-201ENST00000581525 TMEM270Q6UE05 265 aa13.34□□□□□ -0.27
SNORD55-201ENST00000581525 RRAGAQ7L523 313 aa13.34□□□□□ -0.27
SNORD55-201ENST00000581525 GPRIN1Q7Z2K8 1008 aa13.34□□□□□ -0.27
SNORD55-201ENST00000581525 CCDC186Q7Z3E2 898 aa13.34□□□□□ -0.27
SNORD55-201ENST00000581525 SIX5Q8N196 739 aa13.34□□□□□ -0.27
SNORD55-201ENST00000581525 ARL14EPQ8N8R7 260 aaPredicted RBP13.34□□□□□ -0.27
SNORD55-201ENST00000581525 RIN3Q8TB24 985 aa13.34□□□□□ -0.27
SNORD55-201ENST00000581525 SLC35F5Q8WV83 523 aa13.34□□□□□ -0.27
SNORD55-201ENST00000581525 KCTD13Q8WZ19 329 aa13.34□□□□□ -0.27
SNORD55-201ENST00000581525 TFAP2BQ92481 460 aa13.34□□□□□ -0.27
SNORD55-201ENST00000581525 SHC3Q92529 594 aa13.34□□□□□ -0.27
SNORD55-201ENST00000581525 FBXO32Q969P5 355 aa13.34□□□□□ -0.27
SNORD55-201ENST00000581525 MSANTD3Q96H12 275 aa13.34□□□□□ -0.27
SNORD55-201ENST00000581525 NELL2Q99435 816 aa13.34□□□□□ -0.27
SNORD55-201ENST00000581525 BRD9Q9H8M2 597 aa13.34□□□□□ -0.27
SNORD55-201ENST00000581525 ARHGEF3Q9NR81 526 aa13.34□□□□□ -0.27
SNORD55-201ENST00000581525 FANCLQ9NW38 375 aa13.34□□□□□ -0.27
SNORD55-201ENST00000581525 DLGAP2Q9P1A6 1054 aa13.34□□□□□ -0.27
SNORD55-201ENST00000581525 LIMA1Q9UHB6 759 aaKnown RBP13.34□□□□□ -0.27
SNORD55-201ENST00000581525 CHORDC1Q9UHD1 332 aaPredicted RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms