RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 STAU1O95793 577 aaKnown RBP11.3□□□□□ -0.6
RFFL-209ENST00000581265 DLATP10515 647 aaKnown RBP11.3□□□□□ -0.6
RFFL-209ENST00000581265 PTPN1P18031 435 aaKnown RBP11.3□□□□□ -0.6
RFFL-209ENST00000581265 MPLP40238 635 aa11.3□□□□□ -0.6
RFFL-209ENST00000581265 ASIC1P78348 528 aa11.3□□□□□ -0.6
RFFL-209ENST00000581265 EHHADHQ08426 723 aa11.3□□□□□ -0.6
RFFL-209ENST00000581265 PSMD2Q13200 908 aa11.3□□□□□ -0.6
RFFL-209ENST00000581265 ELF2Q15723 593 aa11.3□□□□□ -0.6
RFFL-209ENST00000581265 GAB4Q2WGN9 574 aa11.3□□□□□ -0.6
RFFL-209ENST00000581265 WDR72Q3MJ13 1102 aa11.3□□□□□ -0.6
RFFL-209ENST00000581265 MDH1BQ5I0G3 518 aa11.3□□□□□ -0.6
RFFL-209ENST00000581265 FAM26FQ5R3K3 315 aa11.3□□□□□ -0.6
RFFL-209ENST00000581265 XXYLT1Q8NBI6 393 aa11.3□□□□□ -0.6
RFFL-209ENST00000581265 SCFD1Q8WVM8 642 aa11.3□□□□□ -0.6
RFFL-209ENST00000581265 ZNF516Q92618 1163 aa11.3□□□□□ -0.6
RFFL-209ENST00000581265 ZNF396Q96N95 335 aaPredicted RBP11.3□□□□□ -0.6
RFFL-209ENST00000581265 FNBP1Q96RU3 617 aa11.3□□□□□ -0.6
RFFL-209ENST00000581265 SNX25Q9H3E2 840 aa11.3□□□□□ -0.6
RFFL-209ENST00000581265 ABCA7Q8IZY2 2146 aa11.29□□□□□ -0.6
RFFL-209ENST00000581265 BCLAF3A2AJT9 711 aaKnown RBP11.29□□□□□ -0.6
RFFL-209ENST00000581265 SLC9A3R1O14745 358 aaPredicted RBP11.29□□□□□ -0.6
RFFL-209ENST00000581265 CUTAO60888 179 aa11.29□□□□□ -0.6
RFFL-209ENST00000581265 ZIC2O95409 532 aaPredicted RBP11.29□□□□□ -0.6
RFFL-209ENST00000581265 OAS1P00973 400 aaKnown RBP11.29□□□□□ -0.6
RFFL-209ENST00000581265 ATICP31939 592 aa11.29□□□□□ -0.6
RFFL-209ENST00000581265 DGKEP52429 567 aa11.29□□□□□ -0.6
RFFL-209ENST00000581265 MRPS21P82921 87 aaKnown RBP11.29□□□□□ -0.6
RFFL-209ENST00000581265 CYP24A1Q07973 514 aa11.29□□□□□ -0.6
RFFL-209ENST00000581265 TAF10Q12962 218 aa11.29□□□□□ -0.6
RFFL-209ENST00000581265 USP39Q53GS9 565 aaKnown RBP11.29□□□□□ -0.6
RFFL-209ENST00000581265 C2orf27AQ580R0 203 aa11.29□□□□□ -0.6
RFFL-209ENST00000581265 DAB2IPQ5VWQ8 1189 aa11.29□□□□□ -0.6
RFFL-209ENST00000581265 TDRD10Q5VZ19 366 aaKnown RBP11.29□□□□□ -0.6
RFFL-209ENST00000581265 SHC4Q6S5L8 630 aa11.29□□□□□ -0.6
RFFL-209ENST00000581265 UNC13DQ70J99 1090 aa11.29□□□□□ -0.6
RFFL-209ENST00000581265 HS2ST1Q7LGA3 356 aa11.29□□□□□ -0.6
RFFL-209ENST00000581265 C11orf74Q86VG3 221 aa11.29□□□□□ -0.6
RFFL-209ENST00000581265 RASSF3Q86WH2 238 aa11.29□□□□□ -0.6
RFFL-209ENST00000581265 C12orf56Q8IXR9 622 aa11.29□□□□□ -0.6
RFFL-209ENST00000581265 TSTD1Q8NFU3 115 aa11.29□□□□□ -0.6
RFFL-209ENST00000581265 OR6B3Q8NGW1 331 aa11.29□□□□□ -0.6
RFFL-209ENST00000581265 CCDC127Q96BQ5 260 aa11.29□□□□□ -0.6
RFFL-209ENST00000581265 DHX58Q96C10 678 aa11.29□□□□□ -0.6
RFFL-209ENST00000581265 SLITRK1Q96PX8 696 aa11.29□□□□□ -0.6
RFFL-209ENST00000581265 CGRRF1Q99675 332 aa11.29□□□□□ -0.6
RFFL-209ENST00000581265 ELOVL4Q9GZR5 314 aa11.29□□□□□ -0.6
RFFL-209ENST00000581265 GZF1Q9H116 711 aaPredicted RBP11.29□□□□□ -0.6
RFFL-209ENST00000581265 XYLT2Q9H1B5 865 aa11.29□□□□□ -0.6
RFFL-209ENST00000581265 MAGEF1Q9HAY2 307 aa11.29□□□□□ -0.6
RFFL-209ENST00000581265 TMEM30AQ9NV96 361 aa11.29□□□□□ -0.6
RFFL-209ENST00000581265 CGNQ9P2M7 1197 aaKnown RBP11.29□□□□□ -0.6
RFFL-209ENST00000581265 UBE4BO95155 1302 aa11.29□□□□□ -0.6
RFFL-209ENST00000581265 EML5Q05BV3 1969 aa11.28□□□□□ -0.6
RFFL-209ENST00000581265 PVALEFA0A1B0GWK0 134 aa11.28□□□□□ -0.6
RFFL-209ENST00000581265 A8MXQ7 604 aa11.28□□□□□ -0.6
RFFL-209ENST00000581265 K7ELQ4 463 aaPredicted RBP11.28□□□□□ -0.6
RFFL-209ENST00000581265 TAF4O00268 1085 aa11.28□□□□□ -0.6
RFFL-209ENST00000581265 CLIC2O15247 247 aa11.28□□□□□ -0.6
RFFL-209ENST00000581265 YEATS4O95619 227 aa11.28□□□□□ -0.6
RFFL-209ENST00000581265 CAVIN2O95810 425 aa11.28□□□□□ -0.6
RFFL-209ENST00000581265 CYP17A1P05093 508 aa11.28□□□□□ -0.6
RFFL-209ENST00000581265 EIF2DP41214 584 aaKnown RBP11.28□□□□□ -0.6
RFFL-209ENST00000581265 CYP2J2P51589 502 aa11.28□□□□□ -0.6
RFFL-209ENST00000581265 CACNA2D1P54289 1103 aa11.28□□□□□ -0.6
RFFL-209ENST00000581265 MYL6P60660 151 aa11.28□□□□□ -0.6
RFFL-209ENST00000581265 TNNC1P63316 161 aa11.28□□□□□ -0.6
RFFL-209ENST00000581265 CREB5Q02930 508 aa11.28□□□□□ -0.6
RFFL-209ENST00000581265 TRPC3Q13507 836 aa11.28□□□□□ -0.6
RFFL-209ENST00000581265 DHCR24Q15392 516 aa11.28□□□□□ -0.6
RFFL-209ENST00000581265 CRY1Q16526 586 aa11.28□□□□□ -0.6
RFFL-209ENST00000581265 BMT2Q1RMZ1 405 aa11.28□□□□□ -0.6
RFFL-209ENST00000581265 RHBDF2Q6PJF5 856 aa11.28□□□□□ -0.6
RFFL-209ENST00000581265 FILIP1Q7Z7B0 1213 aa11.28□□□□□ -0.6
RFFL-209ENST00000581265 NUP93Q8N1F7 819 aa11.28□□□□□ -0.6
RFFL-209ENST00000581265 B3GALNT2Q8NCR0 500 aa11.28□□□□□ -0.6
RFFL-209ENST00000581265 CNOT6LQ96LI5 555 aaKnown RBP11.28□□□□□ -0.6
RFFL-209ENST00000581265 SCNM1Q9BWG6 230 aa11.28□□□□□ -0.6
RFFL-209ENST00000581265 B3GNT5Q9BYG0 378 aa11.28□□□□□ -0.6
RFFL-209ENST00000581265 ZNF518BQ9C0D4 1074 aa11.28□□□□□ -0.6
RFFL-209ENST00000581265 SMOC1Q9H4F8 434 aa11.28□□□□□ -0.6
RFFL-209ENST00000581265 VRTNQ9H8Y1 702 aa11.28□□□□□ -0.6
RFFL-209ENST00000581265 FOXD4L1Q9NU39 408 aa11.28□□□□□ -0.6
RFFL-209ENST00000581265 IL37Q9NZH6 218 aa11.28□□□□□ -0.6
RFFL-209ENST00000581265 MMP17Q9ULZ9 603 aa11.28□□□□□ -0.6
RFFL-209ENST00000581265 CPQQ9Y646 472 aa11.28□□□□□ -0.6
RFFL-209ENST00000581265 GON4LQ3T8J9 2241 aa11.28□□□□□ -0.6
RFFL-209ENST00000581265 FASNP49327 2511 aaKnown RBP11.28□□□□□ -0.6
RFFL-209ENST00000581265 ANTXRLA6NF34 631 aa11.27□□□□□ -0.61
RFFL-209ENST00000581265 GIPC1O14908 333 aa11.27□□□□□ -0.61
RFFL-209ENST00000581265 POLR2DO15514 142 aaKnown RBP11.27□□□□□ -0.61
RFFL-209ENST00000581265 RTN3O95197 1032 aaPredicted RBP11.27□□□□□ -0.61
RFFL-209ENST00000581265 ABL1P00519 1130 aa11.27□□□□□ -0.61
RFFL-209ENST00000581265 CHRM1P11229 460 aaPredicted RBP11.27□□□□□ -0.61
RFFL-209ENST00000581265 PDIA4P13667 645 aaKnown RBP11.27□□□□□ -0.61
RFFL-209ENST00000581265 YWHAQP27348 245 aa11.27□□□□□ -0.61
RFFL-209ENST00000581265 GBP1P32455 592 aa11.27□□□□□ -0.61
RFFL-209ENST00000581265 SLC6A11P48066 632 aa11.27□□□□□ -0.61
RFFL-209ENST00000581265 CLDN10P78369 228 aa11.27□□□□□ -0.61
RFFL-209ENST00000581265 KNOP1Q1ED39 458 aaKnown RBP11.27□□□□□ -0.61
RFFL-209ENST00000581265 HSF5Q4G112 596 aaPredicted RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms