RNA–Protein interactions for RNA: ENST00000580972.1

RNU4ATAC-201, Transcript of RNA, U4atac small nuclear (U12-dependent splicing), humanhuman

BASIC

Gene RNU4ATAC, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC-201ENST00000580972 ZWILCHQ9H900 591 aa6.47□□□□□ -1.37
RNU4ATAC-201ENST00000580972 TMPRSS4Q9NRS4 437 aa6.47□□□□□ -1.37
RNU4ATAC-201ENST00000580972 RBM12Q9NTZ6 932 aaKnown RBP6.47□□□□□ -1.37
RNU4ATAC-201ENST00000580972 PCSK1NQ9UHG2 260 aa6.47□□□□□ -1.37
RNU4ATAC-201ENST00000580972 DSEQ9UL01 958 aa6.47□□□□□ -1.37
RNU4ATAC-201ENST00000580972 SLC27A5Q9Y2P5 690 aa6.47□□□□□ -1.37
RNU4ATAC-201ENST00000580972 SCINQ9Y6U3 715 aa6.47□□□□□ -1.37
RNU4ATAC-201ENST00000580972 CENPFP49454 3210 aa6.47□□□□□ -1.37
RNU4ATAC-201ENST00000580972 SF3B1O75533 1304 aaKnown RBP eCLIP6.47□□□□□ -1.37
RNU4ATAC-201ENST00000580972 BRCA2P51587 3418 aa6.47□□□□□ -1.37
RNU4ATAC-201ENST00000580972 SYNJ2BP-COX16A0A087WUM0 186 aa6.46□□□□□ -1.38
RNU4ATAC-201ENST00000580972 MTMR11A4FU01 709 aa6.46□□□□□ -1.38
RNU4ATAC-201ENST00000580972 YJEFN3A6XGL0 299 aa6.46□□□□□ -1.38
RNU4ATAC-201ENST00000580972 E7ENQ6 273 aa6.46□□□□□ -1.38
RNU4ATAC-201ENST00000580972 SYN3O14994 580 aa6.46□□□□□ -1.38
RNU4ATAC-201ENST00000580972 LRCH4O75427 683 aa6.46□□□□□ -1.38
RNU4ATAC-201ENST00000580972 ZMYND10O75800 440 aa6.46□□□□□ -1.38
RNU4ATAC-201ENST00000580972 FYNP06241 537 aa6.46□□□□□ -1.38
RNU4ATAC-201ENST00000580972 CD48P09326 243 aa6.46□□□□□ -1.38
RNU4ATAC-201ENST00000580972 RHOXF2BP0C7M4 288 aa6.46□□□□□ -1.38
RNU4ATAC-201ENST00000580972 PDGFRAP16234 1089 aa6.46□□□□□ -1.38
RNU4ATAC-201ENST00000580972 TCP1P17987 556 aaKnown RBP6.46□□□□□ -1.38
RNU4ATAC-201ENST00000580972 GPD1P21695 349 aa6.46□□□□□ -1.38
RNU4ATAC-201ENST00000580972 MIPP30301 263 aa6.46□□□□□ -1.38
RNU4ATAC-201ENST00000580972 CTNNA1P35221 906 aaKnown RBP6.46□□□□□ -1.38
RNU4ATAC-201ENST00000580972 DAOAP59103 153 aa6.46□□□□□ -1.38
RNU4ATAC-201ENST00000580972 USP46P62068 366 aa6.46□□□□□ -1.38
RNU4ATAC-201ENST00000580972 SLC6A3Q01959 620 aa6.46□□□□□ -1.38
RNU4ATAC-201ENST00000580972 SLC25A11Q02978 314 aaKnown RBP6.46□□□□□ -1.38
RNU4ATAC-201ENST00000580972 ADCY2Q08462 1091 aa6.46□□□□□ -1.38
RNU4ATAC-201ENST00000580972 CA9Q16790 459 aa6.46□□□□□ -1.38
RNU4ATAC-201ENST00000580972 KCNT1Q5JUK3 1230 aa6.46□□□□□ -1.38
RNU4ATAC-201ENST00000580972 SYPL2Q5VXT5 272 aa6.46□□□□□ -1.38
RNU4ATAC-201ENST00000580972 ZNF280DQ6N043 979 aa6.46□□□□□ -1.38
RNU4ATAC-201ENST00000580972 RSRC2Q7L4I2 434 aaKnown RBP6.46□□□□□ -1.38
RNU4ATAC-201ENST00000580972 SPATA2LQ8IUW3 424 aaPredicted RBP6.46□□□□□ -1.38
RNU4ATAC-201ENST00000580972 CMTR2Q8IYT2 770 aaKnown RBP6.46□□□□□ -1.38
RNU4ATAC-201ENST00000580972 RNF168Q8IYW5 571 aaPredicted RBP6.46□□□□□ -1.38
RNU4ATAC-201ENST00000580972 SYCE1Q8N0S2 351 aa6.46□□□□□ -1.38
RNU4ATAC-201ENST00000580972 DEFB106AQ8N104 65 aa6.46□□□□□ -1.38
RNU4ATAC-201ENST00000580972 THEM5Q8N1Q8 247 aa6.46□□□□□ -1.38
RNU4ATAC-201ENST00000580972 ADAM32Q8TC27 787 aa6.46□□□□□ -1.38
RNU4ATAC-201ENST00000580972 GIPC2Q8TF65 315 aa6.46□□□□□ -1.38
RNU4ATAC-201ENST00000580972 HDAC7Q8WUI4 952 aa6.46□□□□□ -1.38
RNU4ATAC-201ENST00000580972 RAPGEF5Q92565 580 aa6.46□□□□□ -1.38
RNU4ATAC-201ENST00000580972 EDEM1Q92611 657 aa6.46□□□□□ -1.38
RNU4ATAC-201ENST00000580972 RNF25Q96BH1 459 aaPredicted RBP6.46□□□□□ -1.38
RNU4ATAC-201ENST00000580972 SMARCD1Q96GM5 515 aa6.46□□□□□ -1.38
RNU4ATAC-201ENST00000580972 ABHD8Q96I13 439 aa6.46□□□□□ -1.38
RNU4ATAC-201ENST00000580972 RNPC3Q96LT9 517 aaKnown RBP6.46□□□□□ -1.38
RNU4ATAC-201ENST00000580972 TBCBQ99426 244 aa6.46□□□□□ -1.38
RNU4ATAC-201ENST00000580972 RHOXF2Q9BQY4 288 aa6.46□□□□□ -1.38
RNU4ATAC-201ENST00000580972 TTPALQ9BTX7 342 aa6.46□□□□□ -1.38
RNU4ATAC-201ENST00000580972 HERC2P3Q9BVR0 1158 aa6.46□□□□□ -1.38
RNU4ATAC-201ENST00000580972 HEMGNQ9BXL5 484 aa6.46□□□□□ -1.38
RNU4ATAC-201ENST00000580972 LRRC4Q9HBW1 653 aa6.46□□□□□ -1.38
RNU4ATAC-201ENST00000580972 CHST7Q9NS84 486 aa6.46□□□□□ -1.38
RNU4ATAC-201ENST00000580972 COX16Q9P0S2 106 aa6.46□□□□□ -1.38
RNU4ATAC-201ENST00000580972 PRKAG2Q9UGJ0 569 aa6.46□□□□□ -1.38
RNU4ATAC-201ENST00000580972 IP6K2Q9UHH9 426 aa6.46□□□□□ -1.38
RNU4ATAC-201ENST00000580972 STRIP2Q9ULQ0 834 aa6.46□□□□□ -1.38
RNU4ATAC-201ENST00000580972 NAALADL1Q9UQQ1 740 aa6.46□□□□□ -1.38
RNU4ATAC-201ENST00000580972 R3HDM2Q9Y2K5 976 aaKnown RBP6.46□□□□□ -1.38
RNU4ATAC-201ENST00000580972 PCDHA3Q9Y5H8 950 aa6.46□□□□□ -1.38
RNU4ATAC-201ENST00000580972 SNX10Q9Y5X0 201 aa6.46□□□□□ -1.38
RNU4ATAC-201ENST00000580972 CDY1Q9Y6F8 540 aa6.46□□□□□ -1.38
RNU4ATAC-201ENST00000580972 WDR27A2RRH5 827 aa6.45□□□□□ -1.38
RNU4ATAC-201ENST00000580972 CTAGE15A4D2H0 777 aa6.45□□□□□ -1.38
RNU4ATAC-201ENST00000580972 ZSCAN5CA6NGD5 496 aaPredicted RBP6.45□□□□□ -1.38
RNU4ATAC-201ENST00000580972 CCDC85CA6NKD9 419 aa6.45□□□□□ -1.38
RNU4ATAC-201ENST00000580972 NRG2O14511 850 aaPredicted RBP6.45□□□□□ -1.38
RNU4ATAC-201ENST00000580972 DPYSL4O14531 572 aa6.45□□□□□ -1.38
RNU4ATAC-201ENST00000580972 TNFRSF10BO14763 440 aa6.45□□□□□ -1.38
RNU4ATAC-201ENST00000580972 MDM4O15151 490 aa6.45□□□□□ -1.38
RNU4ATAC-201ENST00000580972 CTIFO43310 598 aaKnown RBP6.45□□□□□ -1.38
RNU4ATAC-201ENST00000580972 TRAPPC3O43617 180 aa6.45□□□□□ -1.38
RNU4ATAC-201ENST00000580972 DAB1O75553 588 aa6.45□□□□□ -1.38
RNU4ATAC-201ENST00000580972 BAIAP3O94812 1187 aa6.45□□□□□ -1.38
RNU4ATAC-201ENST00000580972 GJB5O95377 273 aa6.45□□□□□ -1.38
RNU4ATAC-201ENST00000580972 SEC24AO95486 1093 aa6.45□□□□□ -1.38
RNU4ATAC-201ENST00000580972 TRUB2O95900 331 aaKnown RBP6.45□□□□□ -1.38
RNU4ATAC-201ENST00000580972 FGGP02679 453 aa6.45□□□□□ -1.38
RNU4ATAC-201ENST00000580972 CTAGE8P0CG41 777 aa6.45□□□□□ -1.38
RNU4ATAC-201ENST00000580972 KRT10P13645 584 aa6.45□□□□□ -1.38
RNU4ATAC-201ENST00000580972 CPB1P15086 417 aa6.45□□□□□ -1.38
RNU4ATAC-201ENST00000580972 DNAJB1P25685 340 aa6.45□□□□□ -1.38
RNU4ATAC-201ENST00000580972 MAN1A1P33908 653 aa6.45□□□□□ -1.38
RNU4ATAC-201ENST00000580972 OR1D2P34982 312 aa6.45□□□□□ -1.38
RNU4ATAC-201ENST00000580972 GRIK1P39086 918 aa6.45□□□□□ -1.38
RNU4ATAC-201ENST00000580972 MAGEA10P43363 369 aaPredicted RBP6.45□□□□□ -1.38
RNU4ATAC-201ENST00000580972 ALDH7A1P49419 539 aaKnown RBP6.45□□□□□ -1.38
RNU4ATAC-201ENST00000580972 SULT1E1P49888 294 aa6.45□□□□□ -1.38
RNU4ATAC-201ENST00000580972 ZNF143P52747 638 aaPredicted RBP6.45□□□□□ -1.38
RNU4ATAC-201ENST00000580972 SLC5A3P53794 718 aa6.45□□□□□ -1.38
RNU4ATAC-201ENST00000580972 HDAC4P56524 1084 aa6.45□□□□□ -1.38
RNU4ATAC-201ENST00000580972 MRPS5P82675 430 aaKnown RBP6.45□□□□□ -1.38
RNU4ATAC-201ENST00000580972 HTRA4P83105 476 aaPredicted RBP6.45□□□□□ -1.38
RNU4ATAC-201ENST00000580972 ROR1Q01973 937 aa6.45□□□□□ -1.38
RNU4ATAC-201ENST00000580972 DUSP4Q13115 394 aa6.45□□□□□ -1.38
RNU4ATAC-201ENST00000580972 MMRN1Q13201 1228 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms