RNA–Protein interactions for RNA: ENST00000580784.5

CSNK1D-215, Transcript of casein kinase 1 delta, humanhuman

TSL 1 (best)

Gene CSNK1D, Length 1,081 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-215ENST00000580784 PFKLP17858 780 aa22.62■■□□□ 1.21
CSNK1D-215ENST00000580784 FNTBP49356 437 aa22.62■■□□□ 1.21
CSNK1D-215ENST00000580784 PDE6CP51160 858 aa22.62■■□□□ 1.21
CSNK1D-215ENST00000580784 AMPD2Q01433 879 aa22.62■■□□□ 1.21
CSNK1D-215ENST00000580784 ORC1Q13415 861 aa22.62■■□□□ 1.21
CSNK1D-215ENST00000580784 EML3Q32P44 896 aa22.62■■□□□ 1.21
CSNK1D-215ENST00000580784 PKN3Q6P5Z2 889 aa22.62■■□□□ 1.21
CSNK1D-215ENST00000580784 FAM35AQ86V20 835 aa22.62■■□□□ 1.21
CSNK1D-215ENST00000580784 CPA6Q8N4T0 437 aa22.62■■□□□ 1.21
CSNK1D-215ENST00000580784 NCDNQ9UBB6 729 aa22.62■■□□□ 1.21
CSNK1D-215ENST00000580784 LEFTY2O00292 366 aa22.61■■□□□ 1.21
CSNK1D-215ENST00000580784 EGFP01133 1207 aa22.61■■□□□ 1.21
CSNK1D-215ENST00000580784 TRIM49P0CI25 452 aa22.61■■□□□ 1.21
CSNK1D-215ENST00000580784 TRIM49CP0CI26 452 aa22.61■■□□□ 1.21
CSNK1D-215ENST00000580784 TCF3P15923 654 aa22.61■■□□□ 1.21
CSNK1D-215ENST00000580784 YWHAQP27348 245 aa22.61■■□□□ 1.21
CSNK1D-215ENST00000580784 PIK3CAP42336 1068 aa22.61■■□□□ 1.21
CSNK1D-215ENST00000580784 ASPAP45381 313 aa22.61■■□□□ 1.21
CSNK1D-215ENST00000580784 GCLMP48507 274 aa22.61■■□□□ 1.21
CSNK1D-215ENST00000580784 NDST1P52848 882 aa22.61■■□□□ 1.21
CSNK1D-215ENST00000580784 PPP3CAQ08209 521 aa22.61■■□□□ 1.21
CSNK1D-215ENST00000580784 ADAM9Q13443 819 aa22.61■■□□□ 1.21
CSNK1D-215ENST00000580784 BECN1Q14457 450 aa22.61■■□□□ 1.21
CSNK1D-215ENST00000580784 HEATR6Q6AI08 1181 aaKnown RBP22.61■■□□□ 1.21
CSNK1D-215ENST00000580784 FAM186BQ8IYM0 893 aa22.61■■□□□ 1.21
CSNK1D-215ENST00000580784 SMYD4Q8IYR2 804 aaPredicted RBP22.61■■□□□ 1.21
CSNK1D-215ENST00000580784 FUKQ8N0W3 1084 aa22.61■■□□□ 1.21
CSNK1D-215ENST00000580784 ATP2A3Q93084 1043 aa22.61■■□□□ 1.21
CSNK1D-215ENST00000580784 SLITRK1Q96PX8 696 aa22.61■■□□□ 1.21
CSNK1D-215ENST00000580784 P2RY13Q9BPV8 354 aa22.61■■□□□ 1.21
CSNK1D-215ENST00000580784 HMGXB4Q9UGU5 601 aa22.61■■□□□ 1.21
CSNK1D-215ENST00000580784 ATP8B3O60423 1300 aa22.6■■□□□ 1.21
CSNK1D-215ENST00000580784 RTN3O95197 1032 aaPredicted RBP22.6■■□□□ 1.21
CSNK1D-215ENST00000580784 RPL13P26373 211 aaKnown RBP22.6■■□□□ 1.21
CSNK1D-215ENST00000580784 PSMC2P35998 433 aaKnown RBP22.6■■□□□ 1.21
CSNK1D-215ENST00000580784 ID4P47928 161 aa22.6■■□□□ 1.21
CSNK1D-215ENST00000580784 SLC7A9P82251 487 aa22.6■■□□□ 1.21
CSNK1D-215ENST00000580784 PNOCQ13519 176 aa22.6■■□□□ 1.21
CSNK1D-215ENST00000580784 ZCWPW2Q504Y3 356 aa22.6■■□□□ 1.21
CSNK1D-215ENST00000580784 INTS8Q75QN2 995 aaKnown RBP22.6■■□□□ 1.21
CSNK1D-215ENST00000580784 FMR1NBQ8N0W7 255 aaPredicted RBP22.6■■□□□ 1.21
CSNK1D-215ENST00000580784 CRYBG2Q8N1P7 616 aa22.6■■□□□ 1.21
CSNK1D-215ENST00000580784 SCAMP5Q8TAC9 235 aa22.6■■□□□ 1.21
CSNK1D-215ENST00000580784 TAS1R2Q8TE23 839 aa22.6■■□□□ 1.21
CSNK1D-215ENST00000580784 MMRN2Q9H8L6 949 aa22.6■■□□□ 1.21
CSNK1D-215ENST00000580784 CHORDC1Q9UHD1 332 aaPredicted RBP22.6■■□□□ 1.21
CSNK1D-215ENST00000580784 MYOFQ9NZM1 2061 aa22.59■■□□□ 1.21
CSNK1D-215ENST00000580784 TNFRSF10BO14763 440 aa22.59■■□□□ 1.21
CSNK1D-215ENST00000580784 HRO43593 1189 aa22.59■■□□□ 1.21
CSNK1D-215ENST00000580784 OLFM2O95897 454 aa22.59■■□□□ 1.21
CSNK1D-215ENST00000580784 OAS1P00973 400 aaKnown RBP22.59■■□□□ 1.21
CSNK1D-215ENST00000580784 KRT13P13646 458 aa22.59■■□□□ 1.21
CSNK1D-215ENST00000580784 CCDC130P13994 396 aa22.59■■□□□ 1.21
CSNK1D-215ENST00000580784 LPAL2Q16609 132 aa22.59■■□□□ 1.21
CSNK1D-215ENST00000580784 C12orf29Q8N999 325 aa22.59■■□□□ 1.21
CSNK1D-215ENST00000580784 FBXO32Q969P5 355 aa22.59■■□□□ 1.21
CSNK1D-215ENST00000580784 EEF2KMTQ96G04 330 aa22.59■■□□□ 1.21
CSNK1D-215ENST00000580784 SMARCD1Q96GM5 515 aa22.59■■□□□ 1.21
CSNK1D-215ENST00000580784 DMAP1Q9NPF5 467 aaPredicted RBP22.59■■□□□ 1.21
CSNK1D-215ENST00000580784 SMPD4Q9NXE4 827 aa22.59■■□□□ 1.21
CSNK1D-215ENST00000580784 CPQQ9Y646 472 aa22.59■■□□□ 1.21
CSNK1D-215ENST00000580784 CEP250Q9BV73 2442 aa22.59■■□□□ 1.21
CSNK1D-215ENST00000580784 MYO16Q9Y6X6 1858 aa22.58■■□□□ 1.21
CSNK1D-215ENST00000580784 AP1G2O75843 785 aa22.58■■□□□ 1.21
CSNK1D-215ENST00000580784 BEST1O76090 585 aa22.58■■□□□ 1.21
CSNK1D-215ENST00000580784 DRD1P21728 446 aa22.58■■□□□ 1.21
CSNK1D-215ENST00000580784 NR1H3Q13133 447 aa22.58■■□□□ 1.21
CSNK1D-215ENST00000580784 SRSF5Q13243 272 aaKnown RBP22.58■■□□□ 1.21
CSNK1D-215ENST00000580784 LONP2Q86WA8 852 aa22.58■■□□□ 1.21
CSNK1D-215ENST00000580784 UNC93AQ86WB7 457 aa22.58■■□□□ 1.21
CSNK1D-215ENST00000580784 ZMIZ2Q8NF64 920 aa22.58■■□□□ 1.21
CSNK1D-215ENST00000580784 SLC2A14Q8TDB8 520 aa22.58■■□□□ 1.21
CSNK1D-215ENST00000580784 CCDC34Q96HJ3 373 aa22.58■■□□□ 1.21
CSNK1D-215ENST00000580784 SMOQ99835 787 aa22.58■■□□□ 1.21
CSNK1D-215ENST00000580784 APOBEC3GQ9HC16 384 aaKnown RBP22.58■■□□□ 1.21
CSNK1D-215ENST00000580784 KRT82Q9NSB4 513 aa22.58■■□□□ 1.21
CSNK1D-215ENST00000580784 FAM49BQ9NUQ9 324 aa22.58■■□□□ 1.21
CSNK1D-215ENST00000580784 IL37Q9NZH6 218 aa22.58■■□□□ 1.21
CSNK1D-215ENST00000580784 GOLGA6L4A6NEF3 574 aa22.57■■□□□ 1.2
CSNK1D-215ENST00000580784 SCAMP3O14828 347 aaKnown RBP22.57■■□□□ 1.2
CSNK1D-215ENST00000580784 RNF40O75150 1001 aa22.57■■□□□ 1.2
CSNK1D-215ENST00000580784 MBL2P11226 248 aaPredicted RBP22.57■■□□□ 1.2
CSNK1D-215ENST00000580784 SLC5A3P53794 718 aa22.57■■□□□ 1.2
CSNK1D-215ENST00000580784 PRR23BQ6ZRT6 265 aa22.57■■□□□ 1.2
CSNK1D-215ENST00000580784 FILIP1Q7Z7B0 1213 aa22.57■■□□□ 1.2
CSNK1D-215ENST00000580784 PDZD8Q8NEN9 1154 aa22.57■■□□□ 1.2
CSNK1D-215ENST00000580784 ENGASEQ8NFI3 743 aa22.57■■□□□ 1.2
CSNK1D-215ENST00000580784 OVCA2Q8WZ82 227 aa22.57■■□□□ 1.2
CSNK1D-215ENST00000580784 EZH1Q92800 747 aaPredicted RBP22.57■■□□□ 1.2
CSNK1D-215ENST00000580784 CD101Q93033 1021 aa22.57■■□□□ 1.2
CSNK1D-215ENST00000580784 SECISBP2LQ93073 1101 aaKnown RBP22.57■■□□□ 1.2
CSNK1D-215ENST00000580784 TWNKQ96RR1 684 aa22.57■■□□□ 1.2
CSNK1D-215ENST00000580784 POLR3BQ9NW08 1133 aaPredicted RBP22.57■■□□□ 1.2
CSNK1D-215ENST00000580784 ATG13O75143 517 aa22.56■■□□□ 1.2
CSNK1D-215ENST00000580784 NFATC1O95644 943 aa22.56■■□□□ 1.2
CSNK1D-215ENST00000580784 HOXA6P31267 233 aa22.56■■□□□ 1.2
CSNK1D-215ENST00000580784 NUCB2P80303 420 aa22.56■■□□□ 1.2
CSNK1D-215ENST00000580784 ENPEPQ07075 957 aa22.56■■□□□ 1.2
CSNK1D-215ENST00000580784 SIM2Q14190 667 aaPredicted RBP22.56■■□□□ 1.2
CSNK1D-215ENST00000580784 EDRF1Q3B7T1 1238 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms