RNA–Protein interactions for RNA: ENST00000580357.1

IFT20-210, Transcript of intraflagellar transport 20, humanhuman

TSL 3

Gene IFT20, Length 752 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-210ENST00000580357 ZNF840PA6NDX5 716 aa17.36■□□□□ 0.37
IFT20-210ENST00000580357 KCNJ18B7U540 433 aa17.36■□□□□ 0.37
IFT20-210ENST00000580357 STK25O00506 426 aa17.36■□□□□ 0.37
IFT20-210ENST00000580357 NUBP1P53384 320 aa17.36■□□□□ 0.37
IFT20-210ENST00000580357 SLC5A3P53794 718 aa17.36■□□□□ 0.37
IFT20-210ENST00000580357 STARD6P59095 220 aa17.36■□□□□ 0.37
IFT20-210ENST00000580357 USP46P62068 366 aa17.36■□□□□ 0.37
IFT20-210ENST00000580357 FCHO2Q0JRZ9 810 aa17.36■□□□□ 0.37
IFT20-210ENST00000580357 KCNJ12Q14500 433 aa17.36■□□□□ 0.37
IFT20-210ENST00000580357 TCP11X2Q5H9J9 407 aa17.36■□□□□ 0.37
IFT20-210ENST00000580357 SNX30Q5VWJ9 437 aa17.36■□□□□ 0.37
IFT20-210ENST00000580357 TMEM270Q6UE05 265 aa17.36■□□□□ 0.37
IFT20-210ENST00000580357 CLEC20AQ6ZU45 233 aa17.36■□□□□ 0.37
IFT20-210ENST00000580357 UBR7Q8N806 425 aa17.36■□□□□ 0.37
IFT20-210ENST00000580357 KIAA1958Q8N8K9 716 aa17.36■□□□□ 0.37
IFT20-210ENST00000580357 ZMIZ2Q8NF64 920 aa17.36■□□□□ 0.37
IFT20-210ENST00000580357 ANKRD20A12PQ8NF67 263 aa17.36■□□□□ 0.37
IFT20-210ENST00000580357 FBXO32Q969P5 355 aa17.36■□□□□ 0.37
IFT20-210ENST00000580357 NELL2Q99435 816 aa17.36■□□□□ 0.37
IFT20-210ENST00000580357 PRRX2Q99811 253 aa17.36■□□□□ 0.37
IFT20-210ENST00000580357 KCNH6Q9H252 994 aa17.36■□□□□ 0.37
IFT20-210ENST00000580357 TMEM30AQ9NV96 361 aa17.36■□□□□ 0.37
IFT20-210ENST00000580357 TMEM63CQ9P1W3 806 aa17.36■□□□□ 0.37
IFT20-210ENST00000580357 NCANO14594 1321 aa17.36■□□□□ 0.37
IFT20-210ENST00000580357 PTPRDP23468 1912 aa17.35■□□□□ 0.37
IFT20-210ENST00000580357 BEST1O76090 585 aa17.35■□□□□ 0.37
IFT20-210ENST00000580357 TCF3P15923 654 aa17.35■□□□□ 0.37
IFT20-210ENST00000580357 RFX1P22670 979 aa17.35■□□□□ 0.37
IFT20-210ENST00000580357 GDI1P31150 447 aa17.35■□□□□ 0.37
IFT20-210ENST00000580357 GRM2Q14416 872 aa17.35■□□□□ 0.37
IFT20-210ENST00000580357 KLHL40Q2TBA0 621 aa17.35■□□□□ 0.37
IFT20-210ENST00000580357 SKOR2Q2VWA4 1001 aaPredicted RBP17.35■□□□□ 0.37
IFT20-210ENST00000580357 ASTLQ6HA08 431 aaPredicted RBP17.35■□□□□ 0.37
IFT20-210ENST00000580357 C1orf228Q6PIY5 440 aa17.35■□□□□ 0.37
IFT20-210ENST00000580357 TRIM65Q6PJ69 517 aa17.35■□□□□ 0.37
IFT20-210ENST00000580357 RRAGAQ7L523 313 aa17.35■□□□□ 0.37
IFT20-210ENST00000580357 TRPC7Q9HCX4 862 aa17.35■□□□□ 0.37
IFT20-210ENST00000580357 ARHGEF3Q9NR81 526 aa17.35■□□□□ 0.37
IFT20-210ENST00000580357 TLR8Q9NR97 1041 aaKnown RBP17.35■□□□□ 0.37
IFT20-210ENST00000580357 SAMSN1Q9NSI8 373 aaKnown RBP17.35■□□□□ 0.37
IFT20-210ENST00000580357 CNTN6Q9UQ52 1028 aa17.35■□□□□ 0.37
IFT20-210ENST00000580357 TECTAO75443 2155 aa17.35■□□□□ 0.37
IFT20-210ENST00000580357 MAN2B1O00754 1011 aa17.34■□□□□ 0.37
IFT20-210ENST00000580357 TADA3O75528 432 aa17.34■□□□□ 0.37
IFT20-210ENST00000580357 ABL1P00519 1130 aa17.34■□□□□ 0.37
IFT20-210ENST00000580357 CKMP06732 381 aa17.34■□□□□ 0.37
IFT20-210ENST00000580357 CD19P15391 556 aa17.34■□□□□ 0.37
IFT20-210ENST00000580357 ACO1P21399 889 aaKnown RBP17.34■□□□□ 0.37
IFT20-210ENST00000580357 TUBP50607 506 aa17.34■□□□□ 0.37
IFT20-210ENST00000580357 MYL5Q02045 173 aa17.34■□□□□ 0.37
IFT20-210ENST00000580357 CNGA2Q16280 664 aa17.34■□□□□ 0.37
IFT20-210ENST00000580357 CAVIN1Q6NZI2 390 aaKnown RBP17.34■□□□□ 0.37
IFT20-210ENST00000580357 CC2D1AQ6P1N0 951 aaPredicted RBP17.34■□□□□ 0.37
IFT20-210ENST00000580357 ARHGEF19Q8IW93 802 aa17.34■□□□□ 0.37
IFT20-210ENST00000580357 ARL14EPQ8N8R7 260 aaPredicted RBP17.34■□□□□ 0.37
IFT20-210ENST00000580357 SCAMP5Q8TAC9 235 aa17.34■□□□□ 0.37
IFT20-210ENST00000580357 CSGALNACT1Q8TDX6 532 aa17.34■□□□□ 0.37
IFT20-210ENST00000580357 USP13Q92995 863 aaPredicted RBP17.34■□□□□ 0.37
IFT20-210ENST00000580357 MSANTD3Q96H12 275 aa17.34■□□□□ 0.37
IFT20-210ENST00000580357 CYP2S1Q96SQ9 504 aa17.34■□□□□ 0.37
IFT20-210ENST00000580357 CRACR2AQ9BSW2 395 aa17.34■□□□□ 0.37
IFT20-210ENST00000580357 CHORDC1Q9UHD1 332 aaPredicted RBP17.34■□□□□ 0.37
IFT20-210ENST00000580357 CA14Q9ULX7 337 aa17.34■□□□□ 0.37
IFT20-210ENST00000580357 SCML2Q9UQR0 700 aa17.34■□□□□ 0.37
IFT20-210ENST00000580357 MRPS17Q9Y2R5 130 aaKnown RBP17.34■□□□□ 0.37
IFT20-210ENST00000580357 KRBA1A5PL33 1030 aa17.33■□□□□ 0.36
IFT20-210ENST00000580357 SMTNL1A8MU46 457 aa17.33■□□□□ 0.36
IFT20-210ENST00000580357 HHLA1C9JL84 531 aa17.33■□□□□ 0.36
IFT20-210ENST00000580357 PES1O00541 588 aaKnown RBP17.33■□□□□ 0.36
IFT20-210ENST00000580357 SLC9A1P19634 815 aa17.33■□□□□ 0.36
IFT20-210ENST00000580357 PON1P27169 355 aa17.33■□□□□ 0.36
IFT20-210ENST00000580357 AVPR2P30518 371 aa17.33■□□□□ 0.36
IFT20-210ENST00000580357 PSEN1P49768 467 aa17.33■□□□□ 0.36
IFT20-210ENST00000580357 MRE11P49959 708 aa17.33■□□□□ 0.36
IFT20-210ENST00000580357 KIF11P52732 1056 aa17.33■□□□□ 0.36
IFT20-210ENST00000580357 BCAT1P54687 386 aa17.33■□□□□ 0.36
IFT20-210ENST00000580357 SLC7A9P82251 487 aa17.33■□□□□ 0.36
IFT20-210ENST00000580357 TYRO3Q06418 890 aa17.33■□□□□ 0.36
IFT20-210ENST00000580357 BST2Q10589 180 aaKnown RBP17.33■□□□□ 0.36
IFT20-210ENST00000580357 IFRD2Q12894 506 aaPredicted RBP17.33■□□□□ 0.36
IFT20-210ENST00000580357 MLF2Q15773 248 aaPredicted RBP17.33■□□□□ 0.36
IFT20-210ENST00000580357 MIIPQ5JXC2 388 aa17.33■□□□□ 0.36
IFT20-210ENST00000580357 HECTD3Q5T447 861 aa17.33■□□□□ 0.36
IFT20-210ENST00000580357 LCLAT1Q6UWP7 414 aa17.33■□□□□ 0.36
IFT20-210ENST00000580357 DDX42Q86XP3 938 aaKnown RBP eCLIP17.33■□□□□ 0.36
IFT20-210ENST00000580357 OSBPL6Q9BZF3 934 aa17.33■□□□□ 0.36
IFT20-210ENST00000580357 C8orf33Q9H7E9 229 aaPredicted RBP17.33■□□□□ 0.36
IFT20-210ENST00000580357 APEX2Q9UBZ4 518 aa17.33■□□□□ 0.36
IFT20-210ENST00000580357 ARHGAP26Q9UNA1 814 aa17.33■□□□□ 0.36
IFT20-210ENST00000580357 GREB1Q4ZG55 1949 aa17.32■□□□□ 0.36
IFT20-210ENST00000580357 C2orf78A6NCI8 922 aa17.32■□□□□ 0.36
IFT20-210ENST00000580357 XPO1O14980 1071 aaKnown RBP17.32■□□□□ 0.36
IFT20-210ENST00000580357 NCAM2O15394 837 aa17.32■□□□□ 0.36
IFT20-210ENST00000580357 MED7O43513 233 aa17.32■□□□□ 0.36
IFT20-210ENST00000580357 PRAMEF12O95522 483 aa17.32■□□□□ 0.36
IFT20-210ENST00000580357 OAS1P00973 400 aaKnown RBP17.32■□□□□ 0.36
IFT20-210ENST00000580357 ZDHHC11BP0C7U3 371 aa17.32■□□□□ 0.36
IFT20-210ENST00000580357 SETSIPP0DME0 302 aa17.32■□□□□ 0.36
IFT20-210ENST00000580357 CDK11BP21127 795 aaKnown RBP17.32■□□□□ 0.36
IFT20-210ENST00000580357 CDKAL1Q5VV42 579 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms