RNA–Protein interactions for RNA: ENST00000580003.1

SS18-214, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 609 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-214ENST00000580003 PADI4Q9UM07 663 aa7.67□□□□□ -1.18
SS18-214ENST00000580003 H0YIZ8 118 aa7.66□□□□□ -1.18
SS18-214ENST00000580003 PSMD9O00233 223 aa7.66□□□□□ -1.18
SS18-214ENST00000580003 RRP9O43818 475 aaKnown RBP7.66□□□□□ -1.18
SS18-214ENST00000580003 PIAS2O75928 621 aa7.66□□□□□ -1.18
SS18-214ENST00000580003 IL18RAPO95256 599 aa7.66□□□□□ -1.18
SS18-214ENST00000580003 MT-ND5P03915 603 aa7.66□□□□□ -1.18
SS18-214ENST00000580003 HNRNPCP07910 306 aaKnown RBP eCLIP7.66□□□□□ -1.18
SS18-214ENST00000580003 NPSP0C0P6 89 aa7.66□□□□□ -1.18
SS18-214ENST00000580003 IL1R1P14778 569 aa7.66□□□□□ -1.18
SS18-214ENST00000580003 EPHA3P29320 983 aa7.66□□□□□ -1.18
SS18-214ENST00000580003 GNALP38405 381 aa7.66□□□□□ -1.18
SS18-214ENST00000580003 MTHFSP49914 203 aa7.66□□□□□ -1.18
SS18-214ENST00000580003 BCAT1P54687 386 aa7.66□□□□□ -1.18
SS18-214ENST00000580003 DAG1Q14118 895 aa7.66□□□□□ -1.18
SS18-214ENST00000580003 TBC1D25Q3MII6 688 aa7.66□□□□□ -1.18
SS18-214ENST00000580003 PCID2Q5JVF3 399 aa7.66□□□□□ -1.18
SS18-214ENST00000580003 SLC9A4Q6AI14 798 aa7.66□□□□□ -1.18
SS18-214ENST00000580003 CEP85Q6P2H3 762 aa7.66□□□□□ -1.18
SS18-214ENST00000580003 KSR2Q6VAB6 950 aa7.66□□□□□ -1.18
SS18-214ENST00000580003 KCTD20Q7Z5Y7 419 aa7.66□□□□□ -1.18
SS18-214ENST00000580003 FANCBQ8NB91 859 aa7.66□□□□□ -1.18
SS18-214ENST00000580003 TRIM5Q9C035 493 aa7.66□□□□□ -1.18
SS18-214ENST00000580003 DUSP22Q9NRW4 184 aa7.66□□□□□ -1.18
SS18-214ENST00000580003 USP22Q9UPT9 525 aa7.66□□□□□ -1.18
SS18-214ENST00000580003 LRRC3CA6NJW4 275 aa7.65□□□□□ -1.18
SS18-214ENST00000580003 AQP7P3A6NL99 342 aa7.65□□□□□ -1.18
SS18-214ENST00000580003 CD3EAPO15446 510 aaKnown RBP7.65□□□□□ -1.18
SS18-214ENST00000580003 PRC1O43663 620 aa7.65□□□□□ -1.18
SS18-214ENST00000580003 C1QL1O75973 258 aa7.65□□□□□ -1.18
SS18-214ENST00000580003 VNN1O95497 513 aa7.65□□□□□ -1.18
SS18-214ENST00000580003 KRT18P05783 430 aaKnown RBP7.65□□□□□ -1.18
SS18-214ENST00000580003 PARP1P09874 1014 aaKnown RBP7.65□□□□□ -1.18
SS18-214ENST00000580003 IL1R2P27930 398 aa7.65□□□□□ -1.18
SS18-214ENST00000580003 PIK3CBP42338 1070 aa7.65□□□□□ -1.18
SS18-214ENST00000580003 NPY5RQ15761 445 aa7.65□□□□□ -1.18
SS18-214ENST00000580003 DPY19L2P1Q6NXN4 242 aa7.65□□□□□ -1.18
SS18-214ENST00000580003 RNF44Q7L0R7 432 aa7.65□□□□□ -1.18
SS18-214ENST00000580003 FAM83DQ9H4H8 585 aa7.65□□□□□ -1.18
SS18-214ENST00000580003 ADAMTS5Q9UNA0 930 aa7.65□□□□□ -1.18
SS18-214ENST00000580003 F8W8V4 182 aa7.64□□□□□ -1.19
SS18-214ENST00000580003 OVOL3O00110 214 aa7.64□□□□□ -1.19
SS18-214ENST00000580003 APAF1O14727 1248 aa7.64□□□□□ -1.19
SS18-214ENST00000580003 ANXA2P07355 339 aaKnown RBP7.64□□□□□ -1.19
SS18-214ENST00000580003 PHKG2P15735 406 aa7.64□□□□□ -1.19
SS18-214ENST00000580003 BTF3P20290 206 aaKnown RBP7.64□□□□□ -1.19
SS18-214ENST00000580003 CD38P28907 300 aa7.64□□□□□ -1.19
SS18-214ENST00000580003 STK3Q13188 491 aa7.64□□□□□ -1.19
SS18-214ENST00000580003 IFIT5Q13325 482 aaKnown RBP7.64□□□□□ -1.19
SS18-214ENST00000580003 Q6ZWC4 215 aa7.64□□□□□ -1.19
SS18-214ENST00000580003 RAB11FIP4Q86YS3 637 aa7.64□□□□□ -1.19
SS18-214ENST00000580003 ABHD11Q8NFV4 315 aa7.64□□□□□ -1.19
SS18-214ENST00000580003 PJA1Q8NG27 643 aa7.64□□□□□ -1.19
SS18-214ENST00000580003 IQCDQ96DY2 449 aa7.64□□□□□ -1.19
SS18-214ENST00000580003 ZNF764Q96H86 408 aaPredicted RBP7.64□□□□□ -1.19
SS18-214ENST00000580003 TBC1D23Q9NUY8 699 aa7.64□□□□□ -1.19
SS18-214ENST00000580003 ADAM21Q9UKJ8 722 aa7.64□□□□□ -1.19
SS18-214ENST00000580003 PMM2O15305 246 aa7.63□□□□□ -1.19
SS18-214ENST00000580003 THAP12O43422 761 aa7.63□□□□□ -1.19
SS18-214ENST00000580003 UQCRC1P31930 480 aa7.63□□□□□ -1.19
SS18-214ENST00000580003 ZNF750Q32MQ0 723 aa7.63□□□□□ -1.19
SS18-214ENST00000580003 FCRL6Q6DN72 434 aa7.63□□□□□ -1.19
SS18-214ENST00000580003 SUMO4Q6EEV6 95 aa7.63□□□□□ -1.19
SS18-214ENST00000580003 SYCE2Q6PIF2 218 aa7.63□□□□□ -1.19
SS18-214ENST00000580003 MTHFD1LQ6UB35 978 aa7.63□□□□□ -1.19
SS18-214ENST00000580003 RSPRY1Q96DX4 576 aa7.63□□□□□ -1.19
SS18-214ENST00000580003 FSD1LQ9BXM9 530 aa7.63□□□□□ -1.19
SS18-214ENST00000580003 GABRQQ9UN88 632 aa7.63□□□□□ -1.19
SS18-214ENST00000580003 DRG1Q9Y295 367 aaKnown RBP7.63□□□□□ -1.19
SS18-214ENST00000580003 POM121BA6NF01 834 aa7.62□□□□□ -1.19
SS18-214ENST00000580003 KPNA5O15131 536 aa7.62□□□□□ -1.19
SS18-214ENST00000580003 JTBO76095 146 aa7.62□□□□□ -1.19
SS18-214ENST00000580003 TJP3O95049 919 aa7.62□□□□□ -1.19
SS18-214ENST00000580003 NBPF7P0C2Y1 421 aaPredicted RBP7.62□□□□□ -1.19
SS18-214ENST00000580003 SLC5A1P13866 664 aa7.62□□□□□ -1.19
SS18-214ENST00000580003 NHLH1Q02575 133 aa7.62□□□□□ -1.19
SS18-214ENST00000580003 ZNF543Q08ER8 600 aa7.62□□□□□ -1.19
SS18-214ENST00000580003 CCDC181Q5TID7 509 aa7.62□□□□□ -1.19
SS18-214ENST00000580003 PLAG1Q6DJT9 500 aa7.62□□□□□ -1.19
SS18-214ENST00000580003 C11orf96Q7Z7L8 435 aa7.62□□□□□ -1.19
SS18-214ENST00000580003 CCDC33Q8N5R6 958 aa7.62□□□□□ -1.19
SS18-214ENST00000580003 ZNF668Q96K58 619 aaPredicted RBP7.62□□□□□ -1.19
SS18-214ENST00000580003 TBCBQ99426 244 aa7.62□□□□□ -1.19
SS18-214ENST00000580003 INO80BQ9C086 356 aaPredicted RBP7.62□□□□□ -1.19
SS18-214ENST00000580003 SH3BP4Q9P0V3 963 aa7.62□□□□□ -1.19
SS18-214ENST00000580003 TARM1B6A8C7 271 aa7.61□□□□□ -1.19
SS18-214ENST00000580003 MYL1P05976 194 aa7.61□□□□□ -1.19
SS18-214ENST00000580003 HGFP14210 728 aa7.61□□□□□ -1.19
SS18-214ENST00000580003 CTGFP29279 349 aa7.61□□□□□ -1.19
SS18-214ENST00000580003 PGDP52209 483 aa7.61□□□□□ -1.19
SS18-214ENST00000580003 SUMO2P61956 95 aaKnown RBP7.61□□□□□ -1.19
SS18-214ENST00000580003 HTRA4P83105 476 aaPredicted RBP7.61□□□□□ -1.19
SS18-214ENST00000580003 FCRLBQ6BAA4 426 aa7.61□□□□□ -1.19
SS18-214ENST00000580003 MZT2AQ6P582 158 aa7.61□□□□□ -1.19
SS18-214ENST00000580003 NAPRTQ6XQN6 538 aa7.61□□□□□ -1.19
SS18-214ENST00000580003 DPY19L3Q6ZPD9 716 aa7.61□□□□□ -1.19
SS18-214ENST00000580003 SIRT6Q8N6T7 355 aa7.61□□□□□ -1.19
SS18-214ENST00000580003 ATP11CQ8NB49 1132 aa7.61□□□□□ -1.19
SS18-214ENST00000580003 ZBTB45Q96K62 511 aaPredicted RBP7.61□□□□□ -1.19
SS18-214ENST00000580003 VN1R3Q9BXE9 311 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms