RNA–Protein interactions for RNA: ENST00000578373.5

ERBB2-206, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 4,523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-206ENST00000578373 TIMM13Q9Y5L4 95 aaPredicted RBP12.49□□□□□ -0.41
ERBB2-206ENST00000578373 WNT10BO00744 389 aa12.49□□□□□ -0.41
ERBB2-206ENST00000578373 KIF1CO43896 1103 aaKnown RBP12.49□□□□□ -0.41
ERBB2-206ENST00000578373 MIPP30301 263 aa12.49□□□□□ -0.41
ERBB2-206ENST00000578373 SNRPFP62306 86 aaKnown RBP12.49□□□□□ -0.41
ERBB2-206ENST00000578373 MRPS35P82673 323 aaKnown RBP12.49□□□□□ -0.41
ERBB2-206ENST00000578373 ITGA9Q13797 1035 aa12.49□□□□□ -0.41
ERBB2-206ENST00000578373 OLFML2BQ68BL8 750 aa12.49□□□□□ -0.41
ERBB2-206ENST00000578373 IZUMO2Q6UXV1 221 aa12.49□□□□□ -0.41
ERBB2-206ENST00000578373 SLC26A11Q86WA9 606 aa12.49□□□□□ -0.41
ERBB2-206ENST00000578373 SCUBE1Q8IWY4 988 aa12.49□□□□□ -0.41
ERBB2-206ENST00000578373 EFCAB3Q8N7B9 438 aa12.49□□□□□ -0.41
ERBB2-206ENST00000578373 KREMEN1Q96MU8 473 aa12.49□□□□□ -0.41
ERBB2-206ENST00000578373 PRMT7Q9NVM4 692 aaPredicted RBP12.49□□□□□ -0.41
ERBB2-206ENST00000578373 A8MUI8 341 aa12.49□□□□□ -0.41
ERBB2-206ENST00000578373 C19orf81C9J6K1 198 aa12.49□□□□□ -0.41
ERBB2-206ENST00000578373 SNX2O60749 519 aa12.49□□□□□ -0.41
ERBB2-206ENST00000578373 GJB1P08034 283 aa12.49□□□□□ -0.41
ERBB2-206ENST00000578373 TFE3P19532 575 aaPredicted RBP12.49□□□□□ -0.41
ERBB2-206ENST00000578373 TCHHL1Q5QJ38 904 aaPredicted RBP12.49□□□□□ -0.41
ERBB2-206ENST00000578373 ZNF662Q6ZS27 426 aa12.49□□□□□ -0.41
ERBB2-206ENST00000578373 EP400NLQ6ZTU2 488 aa12.49□□□□□ -0.41
ERBB2-206ENST00000578373 FAM96AQ9H5X1 160 aa12.49□□□□□ -0.41
ERBB2-206ENST00000578373 PTPRHQ9HD43 1115 aa12.49□□□□□ -0.41
ERBB2-206ENST00000578373 AJAP1Q9UKB5 411 aaPredicted RBP12.49□□□□□ -0.41
ERBB2-206ENST00000578373 A0A1W2PPM1 405 aa12.48□□□□□ -0.41
ERBB2-206ENST00000578373 TYW5A2RUC4 315 aaKnown RBP12.48□□□□□ -0.41
ERBB2-206ENST00000578373 RPS6KA5O75582 802 aa12.48□□□□□ -0.41
ERBB2-206ENST00000578373 CYP2C9P11712 490 aa12.48□□□□□ -0.41
ERBB2-206ENST00000578373 XPAP23025 273 aaPredicted RBP12.48□□□□□ -0.41
ERBB2-206ENST00000578373 PTPN4P29074 926 aa12.48□□□□□ -0.41
ERBB2-206ENST00000578373 SERPINB9P50453 376 aa12.48□□□□□ -0.41
ERBB2-206ENST00000578373 SH3BGRP55822 239 aaPredicted RBP12.48□□□□□ -0.41
ERBB2-206ENST00000578373 GCNT1Q02742 428 aa12.48□□□□□ -0.41
ERBB2-206ENST00000578373 CAPRIN1Q14444 709 aaKnown RBP12.48□□□□□ -0.41
ERBB2-206ENST00000578373 CD302Q8IX05 232 aa12.48□□□□□ -0.41
ERBB2-206ENST00000578373 FAM71AQ8IYT1 594 aa12.48□□□□□ -0.41
ERBB2-206ENST00000578373 BHMTQ93088 406 aa12.48□□□□□ -0.41
ERBB2-206ENST00000578373 CNBD2Q96M20 576 aa12.48□□□□□ -0.41
ERBB2-206ENST00000578373 KIAA1683Q9H0B3 1180 aa12.48□□□□□ -0.41
ERBB2-206ENST00000578373 PCDH9Q9HC56 1237 aa12.48□□□□□ -0.41
ERBB2-206ENST00000578373 ERAP1Q9NZ08 941 aa12.48□□□□□ -0.41
ERBB2-206ENST00000578373 LZTS1Q9Y250 596 aa12.48□□□□□ -0.41
ERBB2-206ENST00000578373 PEAK1Q9H792 1746 aa12.48□□□□□ -0.41
ERBB2-206ENST00000578373 CES2O00748 559 aa12.48□□□□□ -0.41
ERBB2-206ENST00000578373 ACAT1P24752 427 aaKnown RBP12.48□□□□□ -0.41
ERBB2-206ENST00000578373 TSPY1Q01534 308 aa12.48□□□□□ -0.41
ERBB2-206ENST00000578373 LAMTOR4Q0VGL1 99 aa12.48□□□□□ -0.41
ERBB2-206ENST00000578373 FLOT2Q14254 428 aa12.48□□□□□ -0.41
ERBB2-206ENST00000578373 POLNQ7Z5Q5 900 aa12.48□□□□□ -0.41
ERBB2-206ENST00000578373 SHC3Q92529 594 aa12.48□□□□□ -0.41
ERBB2-206ENST00000578373 USP13Q92995 863 aaPredicted RBP12.48□□□□□ -0.41
ERBB2-206ENST00000578373 CMTM5Q96DZ9 223 aa12.48□□□□□ -0.41
ERBB2-206ENST00000578373 L3MBTL3Q96JM7 780 aaPredicted RBP12.48□□□□□ -0.41
ERBB2-206ENST00000578373 ZNF560Q96MR9 790 aa12.48□□□□□ -0.41
ERBB2-206ENST00000578373 SRPK1Q96SB4 655 aaKnown RBP12.48□□□□□ -0.41
ERBB2-206ENST00000578373 DRC3Q9H069 523 aa12.48□□□□□ -0.41
ERBB2-206ENST00000578373 CAAP1Q9H8G2 361 aa12.48□□□□□ -0.41
ERBB2-206ENST00000578373 ATRNO75882 1429 aa12.48□□□□□ -0.41
ERBB2-206ENST00000578373 O00370 1275 aa12.48□□□□□ -0.41
ERBB2-206ENST00000578373 DNM1LO00429 736 aa12.48□□□□□ -0.41
ERBB2-206ENST00000578373 TSPAN3O60637 253 aa12.48□□□□□ -0.41
ERBB2-206ENST00000578373 C6orf222P0C671 652 aaPredicted RBP12.48□□□□□ -0.41
ERBB2-206ENST00000578373 KCNA2P16389 499 aa12.48□□□□□ -0.41
ERBB2-206ENST00000578373 MMRN1Q13201 1228 aa12.48□□□□□ -0.41
ERBB2-206ENST00000578373 MTHFD1LQ6UB35 978 aa12.48□□□□□ -0.41
ERBB2-206ENST00000578373 FRA10AC1Q70Z53 315 aa12.48□□□□□ -0.41
ERBB2-206ENST00000578373 TAS2R42Q7RTR8 314 aa12.48□□□□□ -0.41
ERBB2-206ENST00000578373 TFB1MQ8WVM0 346 aaKnown RBP12.48□□□□□ -0.41
ERBB2-206ENST00000578373 KCNK16Q96T55 309 aa12.48□□□□□ -0.41
ERBB2-206ENST00000578373 EGFL8Q99944 293 aa12.48□□□□□ -0.41
ERBB2-206ENST00000578373 CNPY3Q9BT09 278 aa12.48□□□□□ -0.41
ERBB2-206ENST00000578373 ATXN3LQ9H3M9 355 aa12.48□□□□□ -0.41
ERBB2-206ENST00000578373 EME2A4GXA9 379 aaPredicted RBP12.47□□□□□ -0.41
ERBB2-206ENST00000578373 HNRNPCL1O60812 293 aaKnown RBP12.47□□□□□ -0.41
ERBB2-206ENST00000578373 KLHL2O95198 593 aa12.47□□□□□ -0.41
ERBB2-206ENST00000578373 JCHAINP01591 159 aa12.47□□□□□ -0.41
ERBB2-206ENST00000578373 KRT16P08779 473 aa12.47□□□□□ -0.41
ERBB2-206ENST00000578373 AMPD1P23109 780 aa12.47□□□□□ -0.41
ERBB2-206ENST00000578373 RBL1P28749 1068 aa12.47□□□□□ -0.41
ERBB2-206ENST00000578373 GRIK1P39086 918 aa12.47□□□□□ -0.41
ERBB2-206ENST00000578373 NDST1P52848 882 aa12.47□□□□□ -0.41
ERBB2-206ENST00000578373 C1QBPQ07021 282 aaKnown RBP12.47□□□□□ -0.41
ERBB2-206ENST00000578373 MAP4K3Q8IVH8 894 aa12.47□□□□□ -0.41
ERBB2-206ENST00000578373 EFHBQ8N7U6 833 aa12.47□□□□□ -0.41
ERBB2-206ENST00000578373 TMEM161BQ8NDZ6 487 aa12.47□□□□□ -0.41
ERBB2-206ENST00000578373 CKAP2Q8WWK9 683 aa12.47□□□□□ -0.41
ERBB2-206ENST00000578373 IDI2Q9BXS1 227 aa12.47□□□□□ -0.41
ERBB2-206ENST00000578373 TSPAN16Q9UKR8 245 aa12.47□□□□□ -0.41
ERBB2-206ENST00000578373 KIF13AQ9H1H9 1805 aa12.47□□□□□ -0.41
ERBB2-206ENST00000578373 KAT6AQ92794 2004 aa12.47□□□□□ -0.41
ERBB2-206ENST00000578373 HBP1O60381 514 aa12.47□□□□□ -0.41
ERBB2-206ENST00000578373 AVILO75366 819 aa12.47□□□□□ -0.41
ERBB2-206ENST00000578373 TNFSF9P41273 254 aa12.47□□□□□ -0.41
ERBB2-206ENST00000578373 MAMLD1Q13495 774 aa12.47□□□□□ -0.41
ERBB2-206ENST00000578373 KPNB1Q14974 876 aaKnown RBP12.47□□□□□ -0.41
ERBB2-206ENST00000578373 PDK1Q15118 436 aa12.47□□□□□ -0.41
ERBB2-206ENST00000578373 ACCSLQ4AC99 568 aa12.47□□□□□ -0.41
ERBB2-206ENST00000578373 MPZL3Q6UWV2 235 aa12.47□□□□□ -0.41
ERBB2-206ENST00000578373 LRRC15Q8TF66 581 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms