RNA–Protein interactions for RNA: ENST00000577990.1

SMARCD2-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-206ENST00000577990 OBP2AQ9NY56 170 aa23.48■■□□□ 1.35
SMARCD2-206ENST00000577990 PCDHB4Q9Y5E5 795 aa23.48■■□□□ 1.35
SMARCD2-206ENST00000577990 VPS13AQ96RL7 3174 aa23.47■■□□□ 1.35
SMARCD2-206ENST00000577990 NPR3P17342 541 aa23.47■■□□□ 1.35
SMARCD2-206ENST00000577990 EEF1GP26641 437 aaKnown RBP23.47■■□□□ 1.35
SMARCD2-206ENST00000577990 PPP3CCP48454 512 aa23.47■■□□□ 1.35
SMARCD2-206ENST00000577990 PFKPQ01813 784 aa23.47■■□□□ 1.35
SMARCD2-206ENST00000577990 EXOC3L4Q17RC7 722 aa23.47■■□□□ 1.35
SMARCD2-206ENST00000577990 KLHL40Q2TBA0 621 aa23.47■■□□□ 1.35
SMARCD2-206ENST00000577990 VWA3BQ502W6 1294 aa23.47■■□□□ 1.35
SMARCD2-206ENST00000577990 TCP11X2Q5H9J9 407 aa23.47■■□□□ 1.35
SMARCD2-206ENST00000577990 PHLDB3Q6NSJ2 640 aa23.47■■□□□ 1.35
SMARCD2-206ENST00000577990 TRIM65Q6PJ69 517 aa23.47■■□□□ 1.35
SMARCD2-206ENST00000577990 TMEM270Q6UE05 265 aa23.47■■□□□ 1.35
SMARCD2-206ENST00000577990 MFSD6LQ8IWD5 586 aa23.47■■□□□ 1.35
SMARCD2-206ENST00000577990 SCAMP5Q8TAC9 235 aa23.47■■□□□ 1.35
SMARCD2-206ENST00000577990 TRMT61BQ9BVS5 477 aaKnown RBP23.47■■□□□ 1.35
SMARCD2-206ENST00000577990 DUSP16Q9BY84 665 aa23.47■■□□□ 1.35
SMARCD2-206ENST00000577990 NDST4Q9H3R1 872 aa23.47■■□□□ 1.35
SMARCD2-206ENST00000577990 ZFHX2Q9C0A1 2572 aaPredicted RBP23.47■■□□□ 1.35
SMARCD2-206ENST00000577990 TRAV19A0A0A6YYK7 116 aa23.46■■□□□ 1.35
SMARCD2-206ENST00000577990 ZNF840PA6NDX5 716 aa23.46■■□□□ 1.35
SMARCD2-206ENST00000577990 SGO2Q562F6 1265 aa23.46■■□□□ 1.35
SMARCD2-206ENST00000577990 MIIPQ5JXC2 388 aa23.46■■□□□ 1.35
SMARCD2-206ENST00000577990 PDZD8Q8NEN9 1154 aa23.46■■□□□ 1.35
SMARCD2-206ENST00000577990 OVCA2Q8WZ82 227 aa23.46■■□□□ 1.35
SMARCD2-206ENST00000577990 FBXO32Q969P5 355 aa23.46■■□□□ 1.35
SMARCD2-206ENST00000577990 KREMEN1Q96MU8 473 aa23.46■■□□□ 1.35
SMARCD2-206ENST00000577990 SMG9Q9H0W8 520 aaKnown RBP23.46■■□□□ 1.35
SMARCD2-206ENST00000577990 BRD9Q9H8M2 597 aa23.46■■□□□ 1.35
SMARCD2-206ENST00000577990 PNPLA8Q9NP80 782 aa23.46■■□□□ 1.35
SMARCD2-206ENST00000577990 UBE2TQ9NPD8 197 aaPredicted RBP23.46■■□□□ 1.35
SMARCD2-206ENST00000577990 IL37Q9NZH6 218 aa23.46■■□□□ 1.35
SMARCD2-206ENST00000577990 CA14Q9ULX7 337 aa23.46■■□□□ 1.35
SMARCD2-206ENST00000577990 C2orf78A6NCI8 922 aa23.45■■□□□ 1.34
SMARCD2-206ENST00000577990 H0Y858 1186 aa23.45■■□□□ 1.34
SMARCD2-206ENST00000577990 PAEPP09466 180 aa23.45■■□□□ 1.34
SMARCD2-206ENST00000577990 VDRP11473 427 aa23.45■■□□□ 1.34
SMARCD2-206ENST00000577990 CD19P15391 556 aa23.45■■□□□ 1.34
SMARCD2-206ENST00000577990 SLC9A1P19634 815 aa23.45■■□□□ 1.34
SMARCD2-206ENST00000577990 GDI1P31150 447 aa23.45■■□□□ 1.34
SMARCD2-206ENST00000577990 MYL5Q02045 173 aa23.45■■□□□ 1.34
SMARCD2-206ENST00000577990 CDKAL1Q5VV42 579 aa23.45■■□□□ 1.34
SMARCD2-206ENST00000577990 YAF2Q8IY57 180 aa23.45■■□□□ 1.34
SMARCD2-206ENST00000577990 CELF5Q8N6W0 485 aaKnown RBP23.45■■□□□ 1.34
SMARCD2-206ENST00000577990 JAKMIP2Q96AA8 810 aa23.45■■□□□ 1.34
SMARCD2-206ENST00000577990 KIF9Q9HAQ2 790 aa23.45■■□□□ 1.34
SMARCD2-206ENST00000577990 ARHGEF3Q9NR81 526 aa23.45■■□□□ 1.34
SMARCD2-206ENST00000577990 KIAA1257Q9ULG3 409 aa23.45■■□□□ 1.34
SMARCD2-206ENST00000577990 COL4A3Q01955 1670 aa23.44■■□□□ 1.34
SMARCD2-206ENST00000577990 FAM92AA1XBS5 289 aa23.44■■□□□ 1.34
SMARCD2-206ENST00000577990 KRBA1A5PL33 1030 aa23.44■■□□□ 1.34
SMARCD2-206ENST00000577990 HHLA1C9JL84 531 aa23.44■■□□□ 1.34
SMARCD2-206ENST00000577990 GALR2O43603 387 aaPredicted RBP23.44■■□□□ 1.34
SMARCD2-206ENST00000577990 PI15O43692 258 aa23.44■■□□□ 1.34
SMARCD2-206ENST00000577990 CKMP06732 381 aa23.44■■□□□ 1.34
SMARCD2-206ENST00000577990 USP17L7P0C7H9 530 aa23.44■■□□□ 1.34
SMARCD2-206ENST00000577990 PFKLP17858 780 aa23.44■■□□□ 1.34
SMARCD2-206ENST00000577990 PON1P27169 355 aa23.44■■□□□ 1.34
SMARCD2-206ENST00000577990 PDE6CP51160 858 aa23.44■■□□□ 1.34
SMARCD2-206ENST00000577990 FCHO2Q0JRZ9 810 aa23.44■■□□□ 1.34
SMARCD2-206ENST00000577990 ZNF268Q14587 947 aaPredicted RBP23.44■■□□□ 1.34
SMARCD2-206ENST00000577990 GOLGA7BQ2TAP0 167 aa23.44■■□□□ 1.34
SMARCD2-206ENST00000577990 ENOSF1Q7L5Y1 443 aa23.44■■□□□ 1.34
SMARCD2-206ENST00000577990 GPRIN1Q7Z2K8 1008 aa23.44■■□□□ 1.34
SMARCD2-206ENST00000577990 ANKRD52Q8NB46 1076 aa23.44■■□□□ 1.34
SMARCD2-206ENST00000577990 RBBP8NLQ8NC74 664 aaPredicted RBP23.44■■□□□ 1.34
SMARCD2-206ENST00000577990 BPIFB1Q8TDL5 484 aa23.44■■□□□ 1.34
SMARCD2-206ENST00000577990 DNASE1L2Q92874 299 aa23.44■■□□□ 1.34
SMARCD2-206ENST00000577990 IRF7Q92985 503 aa23.44■■□□□ 1.34
SMARCD2-206ENST00000577990 USP13Q92995 863 aaPredicted RBP23.44■■□□□ 1.34
SMARCD2-206ENST00000577990 FAM81BQ96LP2 452 aa23.44■■□□□ 1.34
SMARCD2-206ENST00000577990 LRRC3BQ96PB8 259 aa23.44■■□□□ 1.34
SMARCD2-206ENST00000577990 SLC22A12Q96S37 553 aa23.44■■□□□ 1.34
SMARCD2-206ENST00000577990 FBXO44Q9H4M3 255 aa23.44■■□□□ 1.34
SMARCD2-206ENST00000577990 TDP1Q9NUW8 608 aa23.44■■□□□ 1.34
SMARCD2-206ENST00000577990 APEX2Q9UBZ4 518 aa23.44■■□□□ 1.34
SMARCD2-206ENST00000577990 DMDP11532 3685 aa23.44■■□□□ 1.34
SMARCD2-206ENST00000577990 PES1O00541 588 aaKnown RBP23.43■■□□□ 1.34
SMARCD2-206ENST00000577990 ZNF263O14978 683 aa23.43■■□□□ 1.34
SMARCD2-206ENST00000577990 ABL1P00519 1130 aa23.43■■□□□ 1.34
SMARCD2-206ENST00000577990 CLCN5P51795 746 aa23.43■■□□□ 1.34
SMARCD2-206ENST00000577990 ZNF132P52740 706 aa23.43■■□□□ 1.34
SMARCD2-206ENST00000577990 GJB7Q6PEY0 223 aa23.43■■□□□ 1.34
SMARCD2-206ENST00000577990 ARL14EPQ8N8R7 260 aaPredicted RBP23.43■■□□□ 1.34
SMARCD2-206ENST00000577990 FANCLQ9NW38 375 aa23.43■■□□□ 1.34
SMARCD2-206ENST00000577990 TAB2Q9NYJ8 693 aa23.43■■□□□ 1.34
SMARCD2-206ENST00000577990 TSPAN16Q9UKR8 245 aa23.43■■□□□ 1.34
SMARCD2-206ENST00000577990 CCL26Q9Y258 94 aa23.43■■□□□ 1.34
SMARCD2-206ENST00000577990 RNF225M0QZC1 329 aaPredicted RBP23.42■■□□□ 1.34
SMARCD2-206ENST00000577990 CHADO15335 359 aa23.42■■□□□ 1.34
SMARCD2-206ENST00000577990 HDCP19113 662 aa23.42■■□□□ 1.34
SMARCD2-206ENST00000577990 MFAP3P55082 362 aa23.42■■□□□ 1.34
SMARCD2-206ENST00000577990 SLC8A3P57103 927 aa23.42■■□□□ 1.34
SMARCD2-206ENST00000577990 APBA1Q02410 837 aa23.42■■□□□ 1.34
SMARCD2-206ENST00000577990 TTC30AQ86WT1 665 aa23.42■■□□□ 1.34
SMARCD2-206ENST00000577990 ATOH1Q92858 354 aaPredicted RBP23.42■■□□□ 1.34
SMARCD2-206ENST00000577990 CYP2S1Q96SQ9 504 aa23.42■■□□□ 1.34
SMARCD2-206ENST00000577990 NAT10Q9H0A0 1025 aaKnown RBP23.42■■□□□ 1.34
SMARCD2-206ENST00000577990 GMIPQ9P107 970 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms