RNA–Protein interactions for RNA: ENST00000577854.1

CDKN2A-211, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 3

Gene CDKN2A, Length 442 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-211ENST00000577854 SH3RF2Q8TEC5 729 aa9.77□□□□□ -0.85
CDKN2A-211ENST00000577854 FAM3CQ92520 227 aa9.77□□□□□ -0.85
CDKN2A-211ENST00000577854 USP13Q92995 863 aaPredicted RBP9.77□□□□□ -0.85
CDKN2A-211ENST00000577854 FAM122AQ96E09 287 aa9.77□□□□□ -0.85
CDKN2A-211ENST00000577854 SLC22A12Q96S37 553 aa9.77□□□□□ -0.85
CDKN2A-211ENST00000577854 HNRNPABQ99729 332 aaKnown RBP9.77□□□□□ -0.85
CDKN2A-211ENST00000577854 PRRX2Q99811 253 aa9.77□□□□□ -0.85
CDKN2A-211ENST00000577854 SMOQ99835 787 aa9.77□□□□□ -0.85
CDKN2A-211ENST00000577854 FBXO44Q9H4M3 255 aa9.77□□□□□ -0.85
CDKN2A-211ENST00000577854 THAP9Q9H5L6 903 aa9.77□□□□□ -0.85
CDKN2A-211ENST00000577854 KIF9Q9HAQ2 790 aa9.77□□□□□ -0.85
CDKN2A-211ENST00000577854 OBP2AQ9NY56 170 aa9.77□□□□□ -0.85
CDKN2A-211ENST00000577854 COQ4Q9Y3A0 265 aa9.77□□□□□ -0.85
CDKN2A-211ENST00000577854 DOCK6Q96HP0 2047 aa9.77□□□□□ -0.85
CDKN2A-211ENST00000577854 ZNF840PA6NDX5 716 aa9.76□□□□□ -0.85
CDKN2A-211ENST00000577854 MAN2B1O00754 1011 aa9.76□□□□□ -0.85
CDKN2A-211ENST00000577854 NCAM2O15394 837 aa9.76□□□□□ -0.85
CDKN2A-211ENST00000577854 CYP26A1O43174 497 aa9.76□□□□□ -0.85
CDKN2A-211ENST00000577854 BEST1O76090 585 aa9.76□□□□□ -0.85
CDKN2A-211ENST00000577854 IRF1P10914 325 aa9.76□□□□□ -0.85
CDKN2A-211ENST00000577854 ERCC5P28715 1186 aaPredicted RBP9.76□□□□□ -0.85
CDKN2A-211ENST00000577854 RAD23BP54727 409 aa9.76□□□□□ -0.85
CDKN2A-211ENST00000577854 PTPN5P54829 565 aa9.76□□□□□ -0.85
CDKN2A-211ENST00000577854 ITPRIPL2Q3MIP1 535 aa9.76□□□□□ -0.85
CDKN2A-211ENST00000577854 HECTD3Q5T447 861 aa9.76□□□□□ -0.85
CDKN2A-211ENST00000577854 CCDC183Q5T5S1 534 aa9.76□□□□□ -0.85
CDKN2A-211ENST00000577854 TRIM68Q6AZZ1 485 aa9.76□□□□□ -0.85
CDKN2A-211ENST00000577854 PHLDB3Q6NSJ2 640 aa9.76□□□□□ -0.85
CDKN2A-211ENST00000577854 CLEC20AQ6ZU45 233 aa9.76□□□□□ -0.85
CDKN2A-211ENST00000577854 ARHGEF19Q8IW93 802 aa9.76□□□□□ -0.85
CDKN2A-211ENST00000577854 SLC4A11Q8NBS3 891 aa9.76□□□□□ -0.85
CDKN2A-211ENST00000577854 EHBP1Q8NDI1 1231 aa9.76□□□□□ -0.85
CDKN2A-211ENST00000577854 PJA1Q8NG27 643 aa9.76□□□□□ -0.85
CDKN2A-211ENST00000577854 WHAMMQ8TF30 809 aa9.76□□□□□ -0.85
CDKN2A-211ENST00000577854 KAT5Q92993 513 aa9.76□□□□□ -0.85
CDKN2A-211ENST00000577854 FAXDC2Q96IV6 333 aa9.76□□□□□ -0.85
CDKN2A-211ENST00000577854 TTLL2Q9BWV7 592 aa9.76□□□□□ -0.85
CDKN2A-211ENST00000577854 EBF3Q9H4W6 596 aa9.76□□□□□ -0.85
CDKN2A-211ENST00000577854 LTB4R2Q9NPC1 389 aa9.76□□□□□ -0.85
CDKN2A-211ENST00000577854 UBE2TQ9NPD8 197 aaPredicted RBP9.76□□□□□ -0.85
CDKN2A-211ENST00000577854 TLR8Q9NR97 1041 aaKnown RBP9.76□□□□□ -0.85
CDKN2A-211ENST00000577854 GKN1Q9NS71 199 aa9.76□□□□□ -0.85
CDKN2A-211ENST00000577854 SPATA6Q9NWH7 488 aaPredicted RBP9.76□□□□□ -0.85
CDKN2A-211ENST00000577854 DUS2Q9NX74 493 aaKnown RBP9.76□□□□□ -0.85
CDKN2A-211ENST00000577854 GTSE1Q9NYZ3 720 aa9.76□□□□□ -0.85
CDKN2A-211ENST00000577854 CPQQ9Y646 472 aa9.76□□□□□ -0.85
CDKN2A-211ENST00000577854 WNT6Q9Y6F9 365 aa9.76□□□□□ -0.85
CDKN2A-211ENST00000577854 DOCK8Q8NF50 2099 aa9.75□□□□□ -0.85
CDKN2A-211ENST00000577854 KCNJ18B7U540 433 aa9.75□□□□□ -0.85
CDKN2A-211ENST00000577854 H0Y858 1186 aa9.75□□□□□ -0.85
CDKN2A-211ENST00000577854 M0QYV0 167 aa9.75□□□□□ -0.85
CDKN2A-211ENST00000577854 GALR2O43603 387 aaPredicted RBP9.75□□□□□ -0.85
CDKN2A-211ENST00000577854 ARSAP15289 507 aa9.75□□□□□ -0.85
CDKN2A-211ENST00000577854 BCAT1P54687 386 aa9.75□□□□□ -0.85
CDKN2A-211ENST00000577854 MARSP56192 900 aaKnown RBP9.75□□□□□ -0.85
CDKN2A-211ENST00000577854 STARD6P59095 220 aa9.75□□□□□ -0.85
CDKN2A-211ENST00000577854 GOLGA8FQ08AF8 430 aa9.75□□□□□ -0.85
CDKN2A-211ENST00000577854 GOLGA8DPQ0D2H9 430 aa9.75□□□□□ -0.85
CDKN2A-211ENST00000577854 FCHO2Q0JRZ9 810 aa9.75□□□□□ -0.85
CDKN2A-211ENST00000577854 KCNJ12Q14500 433 aa9.75□□□□□ -0.85
CDKN2A-211ENST00000577854 STX1AQ16623 288 aa9.75□□□□□ -0.85
CDKN2A-211ENST00000577854 ARHGAP44Q17R89 818 aa9.75□□□□□ -0.85
CDKN2A-211ENST00000577854 EXOC3L4Q17RC7 722 aa9.75□□□□□ -0.85
CDKN2A-211ENST00000577854 GBP6Q6ZN66 633 aa9.75□□□□□ -0.85
CDKN2A-211ENST00000577854 RSRC2Q7L4I2 434 aaKnown RBP9.75□□□□□ -0.85
CDKN2A-211ENST00000577854 GPRIN1Q7Z2K8 1008 aa9.75□□□□□ -0.85
CDKN2A-211ENST00000577854 SIX6OS1Q8N1H7 587 aa9.75□□□□□ -0.85
CDKN2A-211ENST00000577854 CPA6Q8N4T0 437 aa9.75□□□□□ -0.85
CDKN2A-211ENST00000577854 RBBP8NLQ8NC74 664 aaPredicted RBP9.75□□□□□ -0.85
CDKN2A-211ENST00000577854 ZMIZ2Q8NF64 920 aa9.75□□□□□ -0.85
CDKN2A-211ENST00000577854 ANKRD20A12PQ8NF67 263 aa9.75□□□□□ -0.85
CDKN2A-211ENST00000577854 PRSS33Q8NF86 280 aa9.75□□□□□ -0.85
CDKN2A-211ENST00000577854 OVCA2Q8WZ82 227 aa9.75□□□□□ -0.85
CDKN2A-211ENST00000577854 ATOH1Q92858 354 aaPredicted RBP9.75□□□□□ -0.85
CDKN2A-211ENST00000577854 LRRC3BQ96PB8 259 aa9.75□□□□□ -0.85
CDKN2A-211ENST00000577854 DUSP16Q9BY84 665 aa9.75□□□□□ -0.85
CDKN2A-211ENST00000577854 C8orf33Q9H7E9 229 aaPredicted RBP9.75□□□□□ -0.85
CDKN2A-211ENST00000577854 CCSER2Q9H7U1 834 aa9.75□□□□□ -0.85
CDKN2A-211ENST00000577854 ANO10Q9NW15 660 aa9.75□□□□□ -0.85
CDKN2A-211ENST00000577854 CFAP97Q9P2B7 532 aa9.75□□□□□ -0.85
CDKN2A-211ENST00000577854 NAGPAQ9UK23 515 aa9.75□□□□□ -0.85
CDKN2A-211ENST00000577854 TSPAN16Q9UKR8 245 aa9.75□□□□□ -0.85
CDKN2A-211ENST00000577854 SH3BP1Q9Y3L3 701 aa9.75□□□□□ -0.85
CDKN2A-211ENST00000577854 MTF2Q9Y483 593 aaPredicted RBP9.75□□□□□ -0.85
CDKN2A-211ENST00000577854 NFE2L3Q9Y4A8 694 aa9.75□□□□□ -0.85
CDKN2A-211ENST00000577854 MYO10Q9HD67 2058 aa9.75□□□□□ -0.85
CDKN2A-211ENST00000577854 NOTCH4Q99466 2003 aa9.74□□□□□ -0.85
CDKN2A-211ENST00000577854 A0A1W2PQH9 124 aa9.74□□□□□ -0.85
CDKN2A-211ENST00000577854 SOBPA7XYQ1 873 aa9.74□□□□□ -0.85
CDKN2A-211ENST00000577854 SPECC1L-ADORA2AF8WAN1 911 aa9.74□□□□□ -0.85
CDKN2A-211ENST00000577854 LEFTY2O00292 366 aa9.74□□□□□ -0.85
CDKN2A-211ENST00000577854 TNFRSF10BO14763 440 aa9.74□□□□□ -0.85
CDKN2A-211ENST00000577854 COCHO43405 550 aa9.74□□□□□ -0.85
CDKN2A-211ENST00000577854 TLR5O60602 858 aa9.74□□□□□ -0.85
CDKN2A-211ENST00000577854 VDRP11473 427 aa9.74□□□□□ -0.85
CDKN2A-211ENST00000577854 BRD2P25440 801 aaKnown RBP9.74□□□□□ -0.85
CDKN2A-211ENST00000577854 TARSP26639 723 aaKnown RBP9.74□□□□□ -0.85
CDKN2A-211ENST00000577854 WEE1P30291 646 aa9.74□□□□□ -0.85
CDKN2A-211ENST00000577854 MFAP3P55082 362 aa9.74□□□□□ -0.85
CDKN2A-211ENST00000577854 AMPD2Q01433 879 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms