RNA–Protein interactions for RNA: ENST00000576862.5

NUP88-213, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-213ENST00000576862 DNAJC10Q8IXB1 793 aa6.39□□□□□ -1.39
NUP88-213ENST00000576862 SARAFQ96BY9 339 aa6.39□□□□□ -1.39
NUP88-213ENST00000576862 DUSP22Q9NRW4 184 aa6.39□□□□□ -1.39
NUP88-213ENST00000576862 CAPN11Q9UMQ6 739 aa6.39□□□□□ -1.39
NUP88-213ENST00000576862 COX11Q9Y6N1 276 aa6.39□□□□□ -1.39
NUP88-213ENST00000576862 FER1L4A9Z1Z3 1794 aa6.39□□□□□ -1.39
NUP88-213ENST00000576862 POM121BA6NF01 834 aa6.38□□□□□ -1.39
NUP88-213ENST00000576862 ZNF213O14771 459 aa6.38□□□□□ -1.39
NUP88-213ENST00000576862 A1BGP04217 495 aa6.38□□□□□ -1.39
NUP88-213ENST00000576862 KRT18P05783 430 aaKnown RBP6.38□□□□□ -1.39
NUP88-213ENST00000576862 MYL3P08590 195 aa6.38□□□□□ -1.39
NUP88-213ENST00000576862 HMGB1P09429 215 aaKnown RBP6.38□□□□□ -1.39
NUP88-213ENST00000576862 PARP1P09874 1014 aaKnown RBP6.38□□□□□ -1.39
NUP88-213ENST00000576862 NDUFB7P17568 137 aa6.38□□□□□ -1.39
NUP88-213ENST00000576862 CTGFP29279 349 aa6.38□□□□□ -1.39
NUP88-213ENST00000576862 CYP2C18P33260 490 aa6.38□□□□□ -1.39
NUP88-213ENST00000576862 CYP1B1Q16678 543 aa6.38□□□□□ -1.39
NUP88-213ENST00000576862 RD3Q7Z3Z2 195 aa6.38□□□□□ -1.39
NUP88-213ENST00000576862 WDR53Q7Z5U6 358 aaPredicted RBP6.38□□□□□ -1.39
NUP88-213ENST00000576862 CAND1Q86VP6 1230 aaKnown RBP6.38□□□□□ -1.39
NUP88-213ENST00000576862 LIX1LQ8IVB5 337 aa6.38□□□□□ -1.39
NUP88-213ENST00000576862 XAGE5Q8WWM1 108 aa6.38□□□□□ -1.39
NUP88-213ENST00000576862 TBC1D23Q9NUY8 699 aa6.38□□□□□ -1.39
NUP88-213ENST00000576862 ZNF212Q9UDV6 495 aa6.38□□□□□ -1.39
NUP88-213ENST00000576862 POLR2AP24928 1970 aaKnown RBP6.38□□□□□ -1.39
NUP88-213ENST00000576862 SPATA31A6Q5VVP1 1343 aa6.37□□□□□ -1.39
NUP88-213ENST00000576862 A0A087WZ62 844 aa6.37□□□□□ -1.39
NUP88-213ENST00000576862 RGS10O43665 173 aa6.37□□□□□ -1.39
NUP88-213ENST00000576862 PIAS2O75928 621 aa6.37□□□□□ -1.39
NUP88-213ENST00000576862 TJP3O95049 919 aa6.37□□□□□ -1.39
NUP88-213ENST00000576862 MYL1P05976 194 aa6.37□□□□□ -1.39
NUP88-213ENST00000576862 FAM163BP0C2L3 166 aa6.37□□□□□ -1.39
NUP88-213ENST00000576862 HGFP14210 728 aa6.37□□□□□ -1.39
NUP88-213ENST00000576862 TPH1P17752 444 aa6.37□□□□□ -1.39
NUP88-213ENST00000576862 ENGP17813 658 aa6.37□□□□□ -1.39
NUP88-213ENST00000576862 UQCRC1P31930 480 aa6.37□□□□□ -1.39
NUP88-213ENST00000576862 TM4SF4P48230 202 aa6.37□□□□□ -1.39
NUP88-213ENST00000576862 PDE1AP54750 535 aa6.37□□□□□ -1.39
NUP88-213ENST00000576862 ELLP55199 621 aaPredicted RBP6.37□□□□□ -1.39
NUP88-213ENST00000576862 SOX10P56693 466 aa6.37□□□□□ -1.39
NUP88-213ENST00000576862 TIAL1Q01085 375 aaKnown RBP eCLIP6.37□□□□□ -1.39
NUP88-213ENST00000576862 KCNAB1Q14722 419 aa6.37□□□□□ -1.39
NUP88-213ENST00000576862 Q6ZWC4 215 aa6.37□□□□□ -1.39
NUP88-213ENST00000576862 RNF44Q7L0R7 432 aa6.37□□□□□ -1.39
NUP88-213ENST00000576862 PARS2Q7L3T8 475 aaKnown RBP6.37□□□□□ -1.39
NUP88-213ENST00000576862 AMIGO2Q86SJ2 522 aa6.37□□□□□ -1.39
NUP88-213ENST00000576862 LRRC71Q8N4P6 559 aa6.37□□□□□ -1.39
NUP88-213ENST00000576862 ATP11CQ8NB49 1132 aa6.37□□□□□ -1.39
NUP88-213ENST00000576862 RP9Q8TA86 221 aaKnown RBP6.37□□□□□ -1.39
NUP88-213ENST00000576862 NTN5Q8WTR8 489 aaPredicted RBP6.37□□□□□ -1.39
NUP88-213ENST00000576862 ZBTB45Q96K62 511 aaPredicted RBP6.37□□□□□ -1.39
NUP88-213ENST00000576862 FSD1LQ9BXM9 530 aa6.37□□□□□ -1.39
NUP88-213ENST00000576862 AGPSO00116 658 aa6.36□□□□□ -1.39
NUP88-213ENST00000576862 GPD1P21695 349 aa6.36□□□□□ -1.39
NUP88-213ENST00000576862 EEFSECP57772 596 aaKnown RBP6.36□□□□□ -1.39
NUP88-213ENST00000576862 FAM153CQ494X1 144 aa6.36□□□□□ -1.39
NUP88-213ENST00000576862 AARS2Q5JTZ9 985 aaKnown RBP6.36□□□□□ -1.39
NUP88-213ENST00000576862 RRAGBQ5VZM2 374 aa6.36□□□□□ -1.39
NUP88-213ENST00000576862 CCSAPQ6IQ19 270 aaPredicted RBP6.36□□□□□ -1.39
NUP88-213ENST00000576862 DPY19L3Q6ZPD9 716 aa6.36□□□□□ -1.39
NUP88-213ENST00000576862 SDR16C5Q8N3Y7 309 aa6.36□□□□□ -1.39
NUP88-213ENST00000576862 VGLL2Q8N8G2 317 aa6.36□□□□□ -1.39
NUP88-213ENST00000576862 PARD3BQ8TEW8 1205 aa6.36□□□□□ -1.39
NUP88-213ENST00000576862 IPCEF1Q8WWN9 437 aaPredicted RBP6.36□□□□□ -1.39
NUP88-213ENST00000576862 RSPRY1Q96DX4 576 aa6.36□□□□□ -1.39
NUP88-213ENST00000576862 CRAMP1Q96RY5 1269 aa6.36□□□□□ -1.39
NUP88-213ENST00000576862 PRR25Q96S07 402 aa6.36□□□□□ -1.39
NUP88-213ENST00000576862 DRG1Q9Y295 367 aaKnown RBP6.36□□□□□ -1.39
NUP88-213ENST00000576862 A0A1W2PPC4 97 aa6.35□□□□□ -1.39
NUP88-213ENST00000576862 AQP7P3A6NL99 342 aa6.35□□□□□ -1.39
NUP88-213ENST00000576862 PROP1O75360 226 aa6.35□□□□□ -1.39
NUP88-213ENST00000576862 INMTO95050 263 aa6.35□□□□□ -1.39
NUP88-213ENST00000576862 HNRNPCP07910 306 aaKnown RBP eCLIP6.35□□□□□ -1.39
NUP88-213ENST00000576862 FGFR2P21802 821 aa6.35□□□□□ -1.39
NUP88-213ENST00000576862 PRKAR1BP31321 381 aa6.35□□□□□ -1.39
NUP88-213ENST00000576862 STT3AP46977 705 aa6.35□□□□□ -1.39
NUP88-213ENST00000576862 ALDH5A1P51649 535 aaPredicted RBP6.35□□□□□ -1.39
NUP88-213ENST00000576862 TPTEP56180 551 aa6.35□□□□□ -1.39
NUP88-213ENST00000576862 PROK1P58294 105 aa6.35□□□□□ -1.39
NUP88-213ENST00000576862 TIRAPP58753 221 aa6.35□□□□□ -1.39
NUP88-213ENST00000576862 STK3Q13188 491 aa6.35□□□□□ -1.39
NUP88-213ENST00000576862 IFIT5Q13325 482 aaKnown RBP6.35□□□□□ -1.39
NUP88-213ENST00000576862 MAP9Q49MG5 647 aa6.35□□□□□ -1.39
NUP88-213ENST00000576862 IL31Q6EBC2 164 aa6.35□□□□□ -1.39
NUP88-213ENST00000576862 C11orf96Q7Z7L8 435 aa6.35□□□□□ -1.39
NUP88-213ENST00000576862 CCDC33Q8N5R6 958 aa6.35□□□□□ -1.39
NUP88-213ENST00000576862 TBC1D5Q92609 795 aa6.35□□□□□ -1.39
NUP88-213ENST00000576862 REPS1Q96D71 796 aa6.35□□□□□ -1.39
NUP88-213ENST00000576862 IQCDQ96DY2 449 aa6.35□□□□□ -1.39
NUP88-213ENST00000576862 LENG8Q96PV6 779 aaPredicted RBP6.35□□□□□ -1.39
NUP88-213ENST00000576862 THAP7Q9BT49 309 aaPredicted RBP6.35□□□□□ -1.39
NUP88-213ENST00000576862 COLEC11Q9BWP8 271 aa6.35□□□□□ -1.39
NUP88-213ENST00000576862 VN1R3Q9BXE9 311 aa6.35□□□□□ -1.39
NUP88-213ENST00000576862 FAM83DQ9H4H8 585 aa6.35□□□□□ -1.39
NUP88-213ENST00000576862 GJB4Q9NTQ9 266 aa6.35□□□□□ -1.39
NUP88-213ENST00000576862 SERGEFQ9UGK8 458 aa6.35□□□□□ -1.39
NUP88-213ENST00000576862 ADAMTS5Q9UNA0 930 aa6.35□□□□□ -1.39
NUP88-213ENST00000576862 CLCA1A8K7I4 914 aa6.34□□□□□ -1.39
NUP88-213ENST00000576862 QSOX1O00391 747 aa6.34□□□□□ -1.39
NUP88-213ENST00000576862 THAP12O43422 761 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms