RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 DHCR24Q15392 516 aa12.43□□□□□ -0.42
CTDNEP1-212ENST00000576613 LYSMD4Q5XG99 296 aa12.43□□□□□ -0.42
CTDNEP1-212ENST00000576613 KIAA1211LQ6NV74 962 aa12.43□□□□□ -0.42
CTDNEP1-212ENST00000576613 SV2BQ7L1I2 683 aa12.43□□□□□ -0.42
CTDNEP1-212ENST00000576613 TMEFF1Q8IYR6 380 aa12.43□□□□□ -0.42
CTDNEP1-212ENST00000576613 PGBD3Q8N328 593 aa12.43□□□□□ -0.42
CTDNEP1-212ENST00000576613 GPD1LQ8N335 351 aa12.43□□□□□ -0.42
CTDNEP1-212ENST00000576613 ZSWIM2Q8NEG5 633 aa12.43□□□□□ -0.42
CTDNEP1-212ENST00000576613 HMGB4Q8WW32 186 aa12.43□□□□□ -0.42
CTDNEP1-212ENST00000576613 RLN3Q8WXF3 142 aa12.43□□□□□ -0.42
CTDNEP1-212ENST00000576613 TMX3Q96JJ7 454 aa12.43□□□□□ -0.42
CTDNEP1-212ENST00000576613 SLITRK1Q96PX8 696 aa12.43□□□□□ -0.42
CTDNEP1-212ENST00000576613 FNBP1Q96RU3 617 aa12.43□□□□□ -0.42
CTDNEP1-212ENST00000576613 TTLL2Q9BWV7 592 aa12.43□□□□□ -0.42
CTDNEP1-212ENST00000576613 CRTAC1Q9NQ79 661 aa12.43□□□□□ -0.42
CTDNEP1-212ENST00000576613 ARHGEF4Q9NR80 690 aa12.43□□□□□ -0.42
CTDNEP1-212ENST00000576613 SIX4Q9UIU6 781 aa12.43□□□□□ -0.42
CTDNEP1-212ENST00000576613 SMC3Q9UQE7 1217 aa12.43□□□□□ -0.42
CTDNEP1-212ENST00000576613 CPQQ9Y646 472 aa12.43□□□□□ -0.42
CTDNEP1-212ENST00000576613 ZNF840PA6NDX5 716 aa12.42□□□□□ -0.42
CTDNEP1-212ENST00000576613 SGK1O00141 431 aa12.42□□□□□ -0.42
CTDNEP1-212ENST00000576613 AP5Z1O43299 807 aa12.42□□□□□ -0.42
CTDNEP1-212ENST00000576613 OLFM2O95897 454 aa12.42□□□□□ -0.42
CTDNEP1-212ENST00000576613 CFIP05156 583 aa12.42□□□□□ -0.42
CTDNEP1-212ENST00000576613 ADH5P11766 374 aa12.42□□□□□ -0.42
CTDNEP1-212ENST00000576613 IDEP14735 1019 aa12.42□□□□□ -0.42
CTDNEP1-212ENST00000576613 WARSP23381 471 aaKnown RBP12.42□□□□□ -0.42
CTDNEP1-212ENST00000576613 LMO2P25791 158 aa12.42□□□□□ -0.42
CTDNEP1-212ENST00000576613 PTGER3P43115 390 aa12.42□□□□□ -0.42
CTDNEP1-212ENST00000576613 TNFRSF4P43489 277 aa12.42□□□□□ -0.42
CTDNEP1-212ENST00000576613 SURF1Q15526 300 aa12.42□□□□□ -0.42
CTDNEP1-212ENST00000576613 DUOXA2Q1HG44 320 aa12.42□□□□□ -0.42
CTDNEP1-212ENST00000576613 PREPLQ4J6C6 727 aaPredicted RBP12.42□□□□□ -0.42
CTDNEP1-212ENST00000576613 TDRD10Q5VZ19 366 aaKnown RBP12.42□□□□□ -0.42
CTDNEP1-212ENST00000576613 RRAGBQ5VZM2 374 aa12.42□□□□□ -0.42
CTDNEP1-212ENST00000576613 LARP1BQ659C4 914 aaKnown RBP12.42□□□□□ -0.42
CTDNEP1-212ENST00000576613 SLC23A3Q6PIS1 610 aa12.42□□□□□ -0.42
CTDNEP1-212ENST00000576613 TRMT11Q7Z4G4 463 aaKnown RBP12.42□□□□□ -0.42
CTDNEP1-212ENST00000576613 LIMS2Q7Z4I7 341 aa12.42□□□□□ -0.42
CTDNEP1-212ENST00000576613 RABEPKQ7Z6M1 372 aa12.42□□□□□ -0.42
CTDNEP1-212ENST00000576613 HDDC3Q8N4P3 179 aa12.42□□□□□ -0.42
CTDNEP1-212ENST00000576613 CEP76Q8TAP6 659 aa12.42□□□□□ -0.42
CTDNEP1-212ENST00000576613 MYCBPAPQ8TBZ2 947 aa12.42□□□□□ -0.42
CTDNEP1-212ENST00000576613 KBTBD7Q8WVZ9 684 aa12.42□□□□□ -0.42
CTDNEP1-212ENST00000576613 PCED1BQ96HM7 432 aa12.42□□□□□ -0.42
CTDNEP1-212ENST00000576613 EPSTI1Q96J88 318 aa12.42□□□□□ -0.42
CTDNEP1-212ENST00000576613 FAM84AQ96KN4 292 aa12.42□□□□□ -0.42
CTDNEP1-212ENST00000576613 C8orf48Q96LL4 319 aa12.42□□□□□ -0.42
CTDNEP1-212ENST00000576613 MMS19Q96T76 1030 aa12.42□□□□□ -0.42
CTDNEP1-212ENST00000576613 CBWD1Q9BRT8 395 aa12.42□□□□□ -0.42
CTDNEP1-212ENST00000576613 RNF38Q9H0F5 515 aa12.42□□□□□ -0.42
CTDNEP1-212ENST00000576613 INTS13Q9NVM9 706 aa12.42□□□□□ -0.42
CTDNEP1-212ENST00000576613 SMPD4Q9NXE4 827 aa12.42□□□□□ -0.42
CTDNEP1-212ENST00000576613 CFAP97Q9P2B7 532 aa12.42□□□□□ -0.42
CTDNEP1-212ENST00000576613 TBC1D14Q9P2M4 693 aa12.42□□□□□ -0.42
CTDNEP1-212ENST00000576613 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.42□□□□□ -0.42
CTDNEP1-212ENST00000576613 DSPP15924 2871 aaKnown RBP12.42□□□□□ -0.42
CTDNEP1-212ENST00000576613 ASCC3Q8N3C0 2202 aaKnown RBP12.41□□□□□ -0.42
CTDNEP1-212ENST00000576613 A0A0A0MRY4 1105 aa12.41□□□□□ -0.42
CTDNEP1-212ENST00000576613 TCRBV21S2A2A0A5A6 115 aa12.41□□□□□ -0.42
CTDNEP1-212ENST00000576613 ANTXRLA6NF34 631 aa12.41□□□□□ -0.42
CTDNEP1-212ENST00000576613 UPK3BL1B0FP48 263 aa12.41□□□□□ -0.42
CTDNEP1-212ENST00000576613 UPK3BL2E5RIL1 263 aa12.41□□□□□ -0.42
CTDNEP1-212ENST00000576613 F8VP50 259 aa12.41□□□□□ -0.42
CTDNEP1-212ENST00000576613 H0Y626 953 aa12.41□□□□□ -0.42
CTDNEP1-212ENST00000576613 HYAL3O43820 417 aaPredicted RBP12.41□□□□□ -0.42
CTDNEP1-212ENST00000576613 TRIM16O95361 564 aa12.41□□□□□ -0.42
CTDNEP1-212ENST00000576613 OAS1P00973 400 aaKnown RBP12.41□□□□□ -0.42
CTDNEP1-212ENST00000576613 PDGFRBP09619 1106 aa12.41□□□□□ -0.42
CTDNEP1-212ENST00000576613 MBL2P11226 248 aaPredicted RBP12.41□□□□□ -0.42
CTDNEP1-212ENST00000576613 HNRNPLP14866 589 aaKnown RBP eCLIP12.41□□□□□ -0.42
CTDNEP1-212ENST00000576613 KIR2DL1P43626 348 aaPredicted RBP12.41□□□□□ -0.42
CTDNEP1-212ENST00000576613 SLC6A11P48066 632 aa12.41□□□□□ -0.42
CTDNEP1-212ENST00000576613 CASP5P51878 434 aa12.41□□□□□ -0.42
CTDNEP1-212ENST00000576613 SIM1P81133 766 aaPredicted RBP12.41□□□□□ -0.42
CTDNEP1-212ENST00000576613 KDSRQ06136 332 aa12.41□□□□□ -0.42
CTDNEP1-212ENST00000576613 GFPT1Q06210 699 aaPredicted RBP12.41□□□□□ -0.42
CTDNEP1-212ENST00000576613 SEMA3BQ13214 749 aa12.41□□□□□ -0.42
CTDNEP1-212ENST00000576613 MAP7D1Q3KQU3 841 aa12.41□□□□□ -0.42
CTDNEP1-212ENST00000576613 PEAR1Q5VY43 1037 aaPredicted RBP12.41□□□□□ -0.42
CTDNEP1-212ENST00000576613 BTBD8Q5XKL5 378 aa12.41□□□□□ -0.42
CTDNEP1-212ENST00000576613 SCARA3Q6AZY7 606 aa12.41□□□□□ -0.42
CTDNEP1-212ENST00000576613 RHBDF2Q6PJF5 856 aa12.41□□□□□ -0.42
CTDNEP1-212ENST00000576613 NUDT18Q6ZVK8 323 aa12.41□□□□□ -0.42
CTDNEP1-212ENST00000576613 STXBP4Q6ZWJ1 553 aa12.41□□□□□ -0.42
CTDNEP1-212ENST00000576613 HS2ST1Q7LGA3 356 aa12.41□□□□□ -0.42
CTDNEP1-212ENST00000576613 KCNV2Q8TDN2 545 aa12.41□□□□□ -0.42
CTDNEP1-212ENST00000576613 DNAJC19Q96DA6 116 aa12.41□□□□□ -0.42
CTDNEP1-212ENST00000576613 OTUB2Q96DC9 234 aa12.41□□□□□ -0.42
CTDNEP1-212ENST00000576613 ELOVL4Q9GZR5 314 aa12.41□□□□□ -0.42
CTDNEP1-212ENST00000576613 SNX25Q9H3E2 840 aa12.41□□□□□ -0.42
CTDNEP1-212ENST00000576613 PCIF1Q9H4Z3 704 aa12.41□□□□□ -0.42
CTDNEP1-212ENST00000576613 TMEM74BQ9NUR3 256 aa12.41□□□□□ -0.42
CTDNEP1-212ENST00000576613 MBD1Q9UIS9 605 aaPredicted RBP12.41□□□□□ -0.42
CTDNEP1-212ENST00000576613 PILRBQ9UKJ0 227 aa12.41□□□□□ -0.42
CTDNEP1-212ENST00000576613 MSRB2Q9Y3D2 182 aa12.41□□□□□ -0.42
CTDNEP1-212ENST00000576613 DMXL2Q8TDJ6 3036 aa12.4□□□□□ -0.42
CTDNEP1-212ENST00000576613 ATXN2Q99700 1313 aaKnown RBP12.4□□□□□ -0.42
CTDNEP1-212ENST00000576613 E2F8A0AVK6 867 aa12.4□□□□□ -0.42
CTDNEP1-212ENST00000576613 ZNF233A6NK53 670 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms