RNA–Protein interactions for RNA: ENST00000575261.5

TVP23B-208, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 697 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-208ENST00000575261 ANGPTL2Q9UKU9 493 aa11.13□□□□□ -0.63
TVP23B-208ENST00000575261 MMP17Q9ULZ9 603 aa11.13□□□□□ -0.63
TVP23B-208ENST00000575261 CPQQ9Y646 472 aa11.13□□□□□ -0.63
TVP23B-208ENST00000575261 CHD6Q8TD26 2715 aa11.13□□□□□ -0.63
TVP23B-208ENST00000575261 BCLAF3A2AJT9 711 aaKnown RBP11.12□□□□□ -0.63
TVP23B-208ENST00000575261 K7EQS6 105 aa11.12□□□□□ -0.63
TVP23B-208ENST00000575261 TGFB1I1O43294 461 aa11.12□□□□□ -0.63
TVP23B-208ENST00000575261 KRT37O76014 449 aa11.12□□□□□ -0.63
TVP23B-208ENST00000575261 ALDH1A2O94788 518 aa11.12□□□□□ -0.63
TVP23B-208ENST00000575261 STAU1O95793 577 aaKnown RBP11.12□□□□□ -0.63
TVP23B-208ENST00000575261 CAVIN2O95810 425 aa11.12□□□□□ -0.63
TVP23B-208ENST00000575261 ABL1P00519 1130 aa11.12□□□□□ -0.63
TVP23B-208ENST00000575261 OAS1P00973 400 aaKnown RBP11.12□□□□□ -0.63
TVP23B-208ENST00000575261 FAM163BP0C2L3 166 aa11.12□□□□□ -0.63
TVP23B-208ENST00000575261 PTPN1P18031 435 aaKnown RBP11.12□□□□□ -0.63
TVP23B-208ENST00000575261 PMLP29590 882 aa11.12□□□□□ -0.63
TVP23B-208ENST00000575261 EIF2DP41214 584 aaKnown RBP11.12□□□□□ -0.63
TVP23B-208ENST00000575261 CYP2J2P51589 502 aa11.12□□□□□ -0.63
TVP23B-208ENST00000575261 TAF10Q12962 218 aa11.12□□□□□ -0.63
TVP23B-208ENST00000575261 TRPC3Q13507 836 aa11.12□□□□□ -0.63
TVP23B-208ENST00000575261 GAB4Q2WGN9 574 aa11.12□□□□□ -0.63
TVP23B-208ENST00000575261 WDR72Q3MJ13 1102 aa11.12□□□□□ -0.63
TVP23B-208ENST00000575261 C2orf27AQ580R0 203 aa11.12□□□□□ -0.63
TVP23B-208ENST00000575261 TDRD10Q5VZ19 366 aaKnown RBP11.12□□□□□ -0.63
TVP23B-208ENST00000575261 PMS2CLQ68D20 193 aa11.12□□□□□ -0.63
TVP23B-208ENST00000575261 ANO7Q6IWH7 933 aa11.12□□□□□ -0.63
TVP23B-208ENST00000575261 UNC13DQ70J99 1090 aa11.12□□□□□ -0.63
TVP23B-208ENST00000575261 RASSF3Q86WH2 238 aa11.12□□□□□ -0.63
TVP23B-208ENST00000575261 DDX42Q86XP3 938 aaKnown RBP eCLIP11.12□□□□□ -0.63
TVP23B-208ENST00000575261 NELFCDQ8IXH7 590 aa11.12□□□□□ -0.63
TVP23B-208ENST00000575261 B3GALNT2Q8NCR0 500 aa11.12□□□□□ -0.63
TVP23B-208ENST00000575261 PDZD8Q8NEN9 1154 aa11.12□□□□□ -0.63
TVP23B-208ENST00000575261 SCFD1Q8WVM8 642 aa11.12□□□□□ -0.63
TVP23B-208ENST00000575261 SYAP1Q96A49 352 aaPredicted RBP11.12□□□□□ -0.63
TVP23B-208ENST00000575261 CCDC127Q96BQ5 260 aa11.12□□□□□ -0.63
TVP23B-208ENST00000575261 ZNF396Q96N95 335 aaPredicted RBP11.12□□□□□ -0.63
TVP23B-208ENST00000575261 LSM14BQ9BX40 385 aaKnown RBP11.12□□□□□ -0.63
TVP23B-208ENST00000575261 TPSD1Q9BZJ3 242 aa11.12□□□□□ -0.63
TVP23B-208ENST00000575261 ZNF518BQ9C0D4 1074 aa11.12□□□□□ -0.63
TVP23B-208ENST00000575261 DPEP3Q9H4B8 488 aa11.12□□□□□ -0.63
TVP23B-208ENST00000575261 FOXD4L1Q9NU39 408 aa11.12□□□□□ -0.63
TVP23B-208ENST00000575261 SMPD4Q9NXE4 827 aa11.12□□□□□ -0.63
TVP23B-208ENST00000575261 CGNQ9P2M7 1197 aaKnown RBP11.12□□□□□ -0.63
TVP23B-208ENST00000575261 NME7Q9Y5B8 376 aa11.12□□□□□ -0.63
TVP23B-208ENST00000575261 NUP205Q92621 2012 aa11.12□□□□□ -0.63
TVP23B-208ENST00000575261 ATP8B3O60423 1300 aa11.11□□□□□ -0.63
TVP23B-208ENST00000575261 LNP1A1A4G5 178 aa11.11□□□□□ -0.63
TVP23B-208ENST00000575261 A8MXQ7 604 aa11.11□□□□□ -0.63
TVP23B-208ENST00000575261 K7ELQ4 463 aaPredicted RBP11.11□□□□□ -0.63
TVP23B-208ENST00000575261 CLIC2O15247 247 aa11.11□□□□□ -0.63
TVP23B-208ENST00000575261 CUTAO60888 179 aa11.11□□□□□ -0.63
TVP23B-208ENST00000575261 CLSTN1O94985 981 aa11.11□□□□□ -0.63
TVP23B-208ENST00000575261 RTN3O95197 1032 aaPredicted RBP11.11□□□□□ -0.63
TVP23B-208ENST00000575261 YEATS4O95619 227 aa11.11□□□□□ -0.63
TVP23B-208ENST00000575261 ADH1CP00326 375 aa11.11□□□□□ -0.63
TVP23B-208ENST00000575261 CST3P01034 146 aaPredicted RBP11.11□□□□□ -0.63
TVP23B-208ENST00000575261 MBL2P11226 248 aaPredicted RBP11.11□□□□□ -0.63
TVP23B-208ENST00000575261 ATICP31939 592 aa11.11□□□□□ -0.63
TVP23B-208ENST00000575261 CACNA2D1P54289 1103 aa11.11□□□□□ -0.63
TVP23B-208ENST00000575261 MRPS21P82921 87 aaKnown RBP11.11□□□□□ -0.63
TVP23B-208ENST00000575261 SHC2P98077 582 aa11.11□□□□□ -0.63
TVP23B-208ENST00000575261 IFRD2Q12894 506 aaPredicted RBP11.11□□□□□ -0.63
TVP23B-208ENST00000575261 DHCR24Q15392 516 aa11.11□□□□□ -0.63
TVP23B-208ENST00000575261 CRY1Q16526 586 aa11.11□□□□□ -0.63
TVP23B-208ENST00000575261 BMT2Q1RMZ1 405 aa11.11□□□□□ -0.63
TVP23B-208ENST00000575261 HSF5Q4G112 596 aaPredicted RBP11.11□□□□□ -0.63
TVP23B-208ENST00000575261 N4BP2L1Q5TBK1 243 aaPredicted RBP11.11□□□□□ -0.63
TVP23B-208ENST00000575261 CYP2U1Q7Z449 544 aa11.11□□□□□ -0.63
TVP23B-208ENST00000575261 MDGA1Q8NFP4 955 aa11.11□□□□□ -0.63
TVP23B-208ENST00000575261 OVCA2Q8WZ82 227 aa11.11□□□□□ -0.63
TVP23B-208ENST00000575261 FBXO32Q969P5 355 aa11.11□□□□□ -0.63
TVP23B-208ENST00000575261 SPACA7Q96KW9 195 aa11.11□□□□□ -0.63
TVP23B-208ENST00000575261 PNKPQ96T60 521 aa11.11□□□□□ -0.63
TVP23B-208ENST00000575261 C7orf25Q9BPX7 421 aa11.11□□□□□ -0.63
TVP23B-208ENST00000575261 RNF38Q9H0F5 515 aa11.11□□□□□ -0.63
TVP23B-208ENST00000575261 TMEM30AQ9NV96 361 aa11.11□□□□□ -0.63
TVP23B-208ENST00000575261 CFAP97Q9P2B7 532 aa11.11□□□□□ -0.63
TVP23B-208ENST00000575261 NXF1Q9UBU9 619 aaKnown RBP11.11□□□□□ -0.63
TVP23B-208ENST00000575261 ZZEF1O43149 2961 aa11.11□□□□□ -0.63
TVP23B-208ENST00000575261 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.1□□□□□ -0.63
TVP23B-208ENST00000575261 SCAMP3O14828 347 aaKnown RBP11.1□□□□□ -0.63
TVP23B-208ENST00000575261 EXOC3O60645 756 aa11.1□□□□□ -0.63
TVP23B-208ENST00000575261 PHACTR2O75167 634 aa11.1□□□□□ -0.63
TVP23B-208ENST00000575261 KCNK5O95279 499 aa11.1□□□□□ -0.63
TVP23B-208ENST00000575261 APODP05090 189 aa11.1□□□□□ -0.63
TVP23B-208ENST00000575261 ADH5P11766 374 aa11.1□□□□□ -0.63
TVP23B-208ENST00000575261 YWHAQP27348 245 aa11.1□□□□□ -0.63
TVP23B-208ENST00000575261 MYL6P60660 151 aa11.1□□□□□ -0.63
TVP23B-208ENST00000575261 EHHADHQ08426 723 aa11.1□□□□□ -0.63
TVP23B-208ENST00000575261 DAB2IPQ5VWQ8 1189 aa11.1□□□□□ -0.63
TVP23B-208ENST00000575261 PSAPL1Q6NUJ1 521 aa11.1□□□□□ -0.63
TVP23B-208ENST00000575261 SHC4Q6S5L8 630 aa11.1□□□□□ -0.63
TVP23B-208ENST00000575261 TTC30AQ86WT1 665 aa11.1□□□□□ -0.63
TVP23B-208ENST00000575261 C12orf56Q8IXR9 622 aa11.1□□□□□ -0.63
TVP23B-208ENST00000575261 ADGRG2Q8IZP9 1017 aa11.1□□□□□ -0.63
TVP23B-208ENST00000575261 NUP93Q8N1F7 819 aa11.1□□□□□ -0.63
TVP23B-208ENST00000575261 CCDC33Q8N5R6 958 aa11.1□□□□□ -0.63
TVP23B-208ENST00000575261 GOLGA5Q8TBA6 731 aa11.1□□□□□ -0.63
TVP23B-208ENST00000575261 WHAMMQ8TF30 809 aa11.1□□□□□ -0.63
TVP23B-208ENST00000575261 B3GNT5Q9BYG0 378 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms