RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 MYCBPQ99417 103 aaPredicted RBP9.35□□□□□ -0.91
NCBP3-204ENST00000574911 LRMDAQ9H2I8 198 aa9.35□□□□□ -0.91
NCBP3-204ENST00000574911 IFT122Q9HBG6 1241 aa9.35□□□□□ -0.91
NCBP3-204ENST00000574911 STK38LQ9Y2H1 464 aa9.35□□□□□ -0.91
NCBP3-204ENST00000574911 CYP3A5P20815 502 aa9.35□□□□□ -0.91
NCBP3-204ENST00000574911 ALDH3A1P30838 453 aa9.35□□□□□ -0.91
NCBP3-204ENST00000574911 STIP1P31948 543 aaKnown RBP9.35□□□□□ -0.91
NCBP3-204ENST00000574911 IRX3P78415 501 aaPredicted RBP9.35□□□□□ -0.91
NCBP3-204ENST00000574911 ROR1Q01973 937 aa9.35□□□□□ -0.91
NCBP3-204ENST00000574911 MMRN1Q13201 1228 aa9.35□□□□□ -0.91
NCBP3-204ENST00000574911 KCNJ11Q14654 390 aa9.35□□□□□ -0.91
NCBP3-204ENST00000574911 FAM102AQ5T9C2 384 aaPredicted RBP9.35□□□□□ -0.91
NCBP3-204ENST00000574911 MAP1SQ66K74 1059 aaPredicted RBP9.35□□□□□ -0.91
NCBP3-204ENST00000574911 TRNP1Q6NT89 227 aa9.35□□□□□ -0.91
NCBP3-204ENST00000574911 VSIG1Q86XK7 387 aa9.35□□□□□ -0.91
NCBP3-204ENST00000574911 IGDCC3Q8IVU1 814 aa9.35□□□□□ -0.91
NCBP3-204ENST00000574911 FBXO16Q8IX29 292 aaPredicted RBP9.35□□□□□ -0.91
NCBP3-204ENST00000574911 TAB3Q8N5C8 712 aaPredicted RBP9.35□□□□□ -0.91
NCBP3-204ENST00000574911 SPATA18Q8TC71 538 aa9.35□□□□□ -0.91
NCBP3-204ENST00000574911 TCP10LQ8TDR4 215 aa9.35□□□□□ -0.91
NCBP3-204ENST00000574911 TMEM237Q96Q45 408 aa9.35□□□□□ -0.91
NCBP3-204ENST00000574911 RAB3IPQ96QF0 476 aaPredicted RBP9.35□□□□□ -0.91
NCBP3-204ENST00000574911 CNPY3Q9BT09 278 aa9.35□□□□□ -0.91
NCBP3-204ENST00000574911 ASCC2Q9H1I8 757 aaPredicted RBP9.35□□□□□ -0.91
NCBP3-204ENST00000574911 PDZD7Q9H5P4 517 aa9.35□□□□□ -0.91
NCBP3-204ENST00000574911 ASB7Q9H672 318 aa9.35□□□□□ -0.91
NCBP3-204ENST00000574911 ETNK1Q9HBU6 452 aa9.35□□□□□ -0.91
NCBP3-204ENST00000574911 GEMIN8Q9NWZ8 242 aaKnown RBP9.35□□□□□ -0.91
NCBP3-204ENST00000574911 L3MBTL1Q9Y468 752 aa9.35□□□□□ -0.91
NCBP3-204ENST00000574911 C2CD4BA6NLJ0 364 aa9.34□□□□□ -0.91
NCBP3-204ENST00000574911 T-ENOLP0DO92 83 aa9.34□□□□□ -0.91
NCBP3-204ENST00000574911 P4HA1P13674 534 aa9.34□□□□□ -0.91
NCBP3-204ENST00000574911 ADRA1DP25100 572 aa9.34□□□□□ -0.91
NCBP3-204ENST00000574911 ELK3P41970 407 aa9.34□□□□□ -0.91
NCBP3-204ENST00000574911 NRLP54845 237 aa9.34□□□□□ -0.91
NCBP3-204ENST00000574911 BASP1P80723 227 aaKnown RBP9.34□□□□□ -0.91
NCBP3-204ENST00000574911 INCA1Q0VD86 236 aa9.34□□□□□ -0.91
NCBP3-204ENST00000574911 FAM47CQ5HY64 1035 aa9.34□□□□□ -0.91
NCBP3-204ENST00000574911 SH3PXD2AQ5TCZ1 1133 aa9.34□□□□□ -0.91
NCBP3-204ENST00000574911 DARS2Q6PI48 645 aaKnown RBP9.34□□□□□ -0.91
NCBP3-204ENST00000574911 IFNLR1Q8IU57 520 aaPredicted RBP9.34□□□□□ -0.91
NCBP3-204ENST00000574911 LINC01465Q8N7H1 131 aa9.34□□□□□ -0.91
NCBP3-204ENST00000574911 GIMAP7Q8NHV1 300 aa9.34□□□□□ -0.91
NCBP3-204ENST00000574911 UBA3Q8TBC4 463 aa9.34□□□□□ -0.91
NCBP3-204ENST00000574911 ZNF398Q8TD17 642 aa9.34□□□□□ -0.91
NCBP3-204ENST00000574911 RXFP2Q8WXD0 754 aa9.34□□□□□ -0.91
NCBP3-204ENST00000574911 INPP5DQ92835 1189 aa9.34□□□□□ -0.91
NCBP3-204ENST00000574911 HEXIM2Q96MH2 286 aaKnown RBP9.34□□□□□ -0.91
NCBP3-204ENST00000574911 CYTH2Q99418 400 aa9.34□□□□□ -0.91
NCBP3-204ENST00000574911 CALN1Q9BXU9 219 aa9.34□□□□□ -0.91
NCBP3-204ENST00000574911 VPS11Q9H270 941 aa9.34□□□□□ -0.91
NCBP3-204ENST00000574911 RNPEPQ9H4A4 650 aa9.34□□□□□ -0.91
NCBP3-204ENST00000574911 TXNRD2Q9NNW7 524 aa9.34□□□□□ -0.91
NCBP3-204ENST00000574911 CHMP2BQ9UQN3 213 aa9.34□□□□□ -0.91
NCBP3-204ENST00000574911 CSADQ9Y600 493 aa9.34□□□□□ -0.91
NCBP3-204ENST00000574911 TEX264Q9Y6I9 313 aa9.34□□□□□ -0.91
NCBP3-204ENST00000574911 OTOFQ9HC10 1997 aa9.34□□□□□ -0.91
NCBP3-204ENST00000574911 C2CD2LO14523 706 aa9.34□□□□□ -0.91
NCBP3-204ENST00000574911 PIAS1O75925 651 aa9.34□□□□□ -0.91
NCBP3-204ENST00000574911 ANP32DO95626 131 aa9.34□□□□□ -0.91
NCBP3-204ENST00000574911 STAU1O95793 577 aaKnown RBP9.34□□□□□ -0.91
NCBP3-204ENST00000574911 ATP2A2P16615 1042 aaKnown RBP9.34□□□□□ -0.91
NCBP3-204ENST00000574911 PHKA2P46019 1235 aa9.34□□□□□ -0.91
NCBP3-204ENST00000574911 CDH6P55285 790 aa9.34□□□□□ -0.91
NCBP3-204ENST00000574911 Q3C1V9 767 aa9.34□□□□□ -0.91
NCBP3-204ENST00000574911 SLC10A6Q3KNW5 377 aa9.34□□□□□ -0.91
NCBP3-204ENST00000574911 RAB6CQ53S08 254 aa9.34□□□□□ -0.91
NCBP3-204ENST00000574911 SLC45A4Q5BKX6 768 aa9.34□□□□□ -0.91
NCBP3-204ENST00000574911 ZNF484Q5JVG2 852 aa9.34□□□□□ -0.91
NCBP3-204ENST00000574911 LCLAT1Q6UWP7 414 aa9.34□□□□□ -0.91
NCBP3-204ENST00000574911 SH2D5Q6ZV89 423 aa9.34□□□□□ -0.91
NCBP3-204ENST00000574911 FAM183BPQ6ZVS7 135 aa9.34□□□□□ -0.91
NCBP3-204ENST00000574911 GPC2Q8N158 579 aa9.34□□□□□ -0.91
NCBP3-204ENST00000574911 AGGF1Q8N302 714 aaeCLIP9.34□□□□□ -0.91
NCBP3-204ENST00000574911 HPDLQ96IR7 371 aa9.34□□□□□ -0.91
NCBP3-204ENST00000574911 MMP19Q99542 508 aa9.34□□□□□ -0.91
NCBP3-204ENST00000574911 RAB6CQ9H0N0 254 aa9.34□□□□□ -0.91
NCBP3-204ENST00000574911 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.34□□□□□ -0.91
NCBP3-204ENST00000574911 SLC17A7Q9P2U7 560 aa9.34□□□□□ -0.91
NCBP3-204ENST00000574911 RBPJLQ9UBG7 517 aa9.34□□□□□ -0.91
NCBP3-204ENST00000574911 BARX2Q9UMQ3 279 aaPredicted RBP9.34□□□□□ -0.91
NCBP3-204ENST00000574911 CHADO15335 359 aa9.33□□□□□ -0.92
NCBP3-204ENST00000574911 PFKMP08237 780 aa9.33□□□□□ -0.92
NCBP3-204ENST00000574911 TXNP10599 105 aaKnown RBP9.33□□□□□ -0.92
NCBP3-204ENST00000574911 IBSPP21815 317 aaPredicted RBP9.33□□□□□ -0.92
NCBP3-204ENST00000574911 TARSP26639 723 aaKnown RBP9.33□□□□□ -0.92
NCBP3-204ENST00000574911 ELF1P32519 619 aa9.33□□□□□ -0.92
NCBP3-204ENST00000574911 NEK3P51956 506 aa9.33□□□□□ -0.92
NCBP3-204ENST00000574911 NDST1P52848 882 aa9.33□□□□□ -0.92
NCBP3-204ENST00000574911 SLC18A2Q05940 514 aa9.33□□□□□ -0.92
NCBP3-204ENST00000574911 MTM1Q13496 603 aa9.33□□□□□ -0.92
NCBP3-204ENST00000574911 TFDP2Q14188 446 aa9.33□□□□□ -0.92
NCBP3-204ENST00000574911 WDR78Q5VTH9 848 aa9.33□□□□□ -0.92
NCBP3-204ENST00000574911 ILDR2Q71H61 639 aa9.33□□□□□ -0.92
NCBP3-204ENST00000574911 CCDC125Q86Z20 511 aa9.33□□□□□ -0.92
NCBP3-204ENST00000574911 SLC44A1Q8WWI5 657 aa9.33□□□□□ -0.92
NCBP3-204ENST00000574911 SLC7A6OSQ96CW6 309 aaPredicted RBP9.33□□□□□ -0.92
NCBP3-204ENST00000574911 CPB2Q96IY4 423 aa9.33□□□□□ -0.92
NCBP3-204ENST00000574911 RNF157Q96PX1 679 aa9.33□□□□□ -0.92
NCBP3-204ENST00000574911 FAM124BQ9H5Z6 455 aaPredicted RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms