RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 SLC2A14Q8TDB8 520 aa13.48□□□□□ -0.25
NPLOC4-213ENST00000573519 OSCP1Q8WVF1 389 aa13.48□□□□□ -0.25
NPLOC4-213ENST00000573519 FBXO32Q969P5 355 aa13.48□□□□□ -0.25
NPLOC4-213ENST00000573519 TMEM8AQ9HCN3 771 aa13.48□□□□□ -0.25
NPLOC4-213ENST00000573519 SMPD4Q9NXE4 827 aa13.48□□□□□ -0.25
NPLOC4-213ENST00000573519 ARHGAP26Q9UNA1 814 aa13.48□□□□□ -0.25
NPLOC4-213ENST00000573519 LEFTY2O00292 366 aa13.47□□□□□ -0.25
NPLOC4-213ENST00000573519 STX10O60499 249 aa13.47□□□□□ -0.25
NPLOC4-213ENST00000573519 MBL2P11226 248 aaPredicted RBP13.47□□□□□ -0.25
NPLOC4-213ENST00000573519 MXI1P50539 228 aa13.47□□□□□ -0.25
NPLOC4-213ENST00000573519 SLC5A3P53794 718 aa13.47□□□□□ -0.25
NPLOC4-213ENST00000573519 NRLP54845 237 aa13.47□□□□□ -0.25
NPLOC4-213ENST00000573519 MAP3K7CLP57077 242 aa13.47□□□□□ -0.25
NPLOC4-213ENST00000573519 CCINQ13939 588 aa13.47□□□□□ -0.25
NPLOC4-213ENST00000573519 DCAF17Q5H9S7 520 aaPredicted RBP13.47□□□□□ -0.25
NPLOC4-213ENST00000573519 PAQR9Q6ZVX9 377 aa13.47□□□□□ -0.25
NPLOC4-213ENST00000573519 FUKQ8N0W3 1084 aa13.47□□□□□ -0.25
NPLOC4-213ENST00000573519 SPEM1Q8N4L4 309 aa13.47□□□□□ -0.25
NPLOC4-213ENST00000573519 C12orf29Q8N999 325 aa13.47□□□□□ -0.25
NPLOC4-213ENST00000573519 PDZD8Q8NEN9 1154 aa13.47□□□□□ -0.25
NPLOC4-213ENST00000573519 SCAMP5Q8TAC9 235 aa13.47□□□□□ -0.25
NPLOC4-213ENST00000573519 ATP2A3Q93084 1043 aa13.47□□□□□ -0.25
NPLOC4-213ENST00000573519 JAKMIP2Q96AA8 810 aa13.47□□□□□ -0.25
NPLOC4-213ENST00000573519 TIGD1Q96MW7 591 aa13.47□□□□□ -0.25
NPLOC4-213ENST00000573519 TWNKQ96RR1 684 aa13.47□□□□□ -0.25
NPLOC4-213ENST00000573519 NIF3L1Q9GZT8 377 aa13.47□□□□□ -0.25
NPLOC4-213ENST00000573519 RNF38Q9H0F5 515 aa13.47□□□□□ -0.25
NPLOC4-213ENST00000573519 ECT2Q9H8V3 914 aa13.47□□□□□ -0.25
NPLOC4-213ENST00000573519 APOBEC3GQ9HC16 384 aaKnown RBP13.47□□□□□ -0.25
NPLOC4-213ENST00000573519 CHORDC1Q9UHD1 332 aaPredicted RBP13.47□□□□□ -0.25
NPLOC4-213ENST00000573519 CPQQ9Y646 472 aa13.47□□□□□ -0.25
NPLOC4-213ENST00000573519 DENND4CQ5VZ89 1909 aa13.47□□□□□ -0.25
NPLOC4-213ENST00000573519 ZFHX2Q9C0A1 2572 aaPredicted RBP13.46□□□□□ -0.25
NPLOC4-213ENST00000573519 TRIM49BA6NDI0 452 aa13.46□□□□□ -0.25
NPLOC4-213ENST00000573519 SCAMP3O14828 347 aaKnown RBP13.46□□□□□ -0.25
NPLOC4-213ENST00000573519 BEST1O76090 585 aa13.46□□□□□ -0.25
NPLOC4-213ENST00000573519 PFKLP17858 780 aa13.46□□□□□ -0.25
NPLOC4-213ENST00000573519 GTF2H1P32780 548 aa13.46□□□□□ -0.25
NPLOC4-213ENST00000573519 GJA4P35212 333 aa13.46□□□□□ -0.25
NPLOC4-213ENST00000573519 ENPEPQ07075 957 aa13.46□□□□□ -0.25
NPLOC4-213ENST00000573519 NR1H3Q13133 447 aa13.46□□□□□ -0.25
NPLOC4-213ENST00000573519 STIM1Q13586 685 aa13.46□□□□□ -0.25
NPLOC4-213ENST00000573519 ANKRD40Q6AI12 368 aa13.46□□□□□ -0.25
NPLOC4-213ENST00000573519 FSTL4Q6MZW2 842 aa13.46□□□□□ -0.25
NPLOC4-213ENST00000573519 CRYBG2Q8N1P7 616 aa13.46□□□□□ -0.25
NPLOC4-213ENST00000573519 SYNPOQ8N3V7 929 aa13.46□□□□□ -0.25
NPLOC4-213ENST00000573519 ZBTB44Q8NCP5 570 aa13.46□□□□□ -0.25
NPLOC4-213ENST00000573519 EXOC4Q96A65 974 aa13.46□□□□□ -0.25
NPLOC4-213ENST00000573519 CHFRQ96EP1 664 aa13.46□□□□□ -0.25
NPLOC4-213ENST00000573519 SMOQ99835 787 aa13.46□□□□□ -0.25
NPLOC4-213ENST00000573519 P2RY13Q9BPV8 354 aa13.46□□□□□ -0.25
NPLOC4-213ENST00000573519 NT5C1AQ9BXI3 368 aa13.46□□□□□ -0.25
NPLOC4-213ENST00000573519 FAM126AQ9BYI3 521 aaPredicted RBP13.46□□□□□ -0.25
NPLOC4-213ENST00000573519 DNAI2Q9GZS0 605 aa13.46□□□□□ -0.25
NPLOC4-213ENST00000573519 LINC00597Q9H2U6 94 aa13.46□□□□□ -0.25
NPLOC4-213ENST00000573519 CYP3A43Q9HB55 503 aa13.46□□□□□ -0.25
NPLOC4-213ENST00000573519 PTPRDP23468 1912 aa13.45□□□□□ -0.26
NPLOC4-213ENST00000573519 PIEZO1Q92508 2521 aa13.45□□□□□ -0.26
NPLOC4-213ENST00000573519 KIF26AQ9ULI4 1882 aaPredicted RBP13.45□□□□□ -0.26
NPLOC4-213ENST00000573519 TRDMT1O14717 391 aaKnown RBP13.45□□□□□ -0.26
NPLOC4-213ENST00000573519 NFATC1O95644 943 aa13.45□□□□□ -0.26
NPLOC4-213ENST00000573519 OAS1P00973 400 aaKnown RBP13.45□□□□□ -0.26
NPLOC4-213ENST00000573519 EGFP01133 1207 aa13.45□□□□□ -0.26
NPLOC4-213ENST00000573519 FAM200BP0CF97 657 aa13.45□□□□□ -0.26
NPLOC4-213ENST00000573519 GALK1P51570 392 aa13.45□□□□□ -0.26
NPLOC4-213ENST00000573519 PMS1P54277 932 aaKnown RBP13.45□□□□□ -0.26
NPLOC4-213ENST00000573519 SLC7A9P82251 487 aa13.45□□□□□ -0.26
NPLOC4-213ENST00000573519 ZXDBP98169 803 aa13.45□□□□□ -0.26
NPLOC4-213ENST00000573519 FKBP3Q00688 224 aaKnown RBP13.45□□□□□ -0.26
NPLOC4-213ENST00000573519 INCA1Q0VD86 236 aa13.45□□□□□ -0.26
NPLOC4-213ENST00000573519 EML3Q32P44 896 aa13.45□□□□□ -0.26
NPLOC4-213ENST00000573519 ZNF394Q53GI3 561 aa13.45□□□□□ -0.26
NPLOC4-213ENST00000573519 TMEM196Q5HYL7 178 aa13.45□□□□□ -0.26
NPLOC4-213ENST00000573519 NAIF1Q69YI7 327 aaPredicted RBP13.45□□□□□ -0.26
NPLOC4-213ENST00000573519 HEATR6Q6AI08 1181 aaKnown RBP13.45□□□□□ -0.26
NPLOC4-213ENST00000573519 MAMSTRQ6ZN01 415 aa13.45□□□□□ -0.26
NPLOC4-213ENST00000573519 FILIP1Q7Z7B0 1213 aa13.45□□□□□ -0.26
NPLOC4-213ENST00000573519 FBXL13Q8NEE6 735 aa13.45□□□□□ -0.26
NPLOC4-213ENST00000573519 SPATA20Q8TB22 786 aa13.45□□□□□ -0.26
NPLOC4-213ENST00000573519 OVCA2Q8WZ82 227 aa13.45□□□□□ -0.26
NPLOC4-213ENST00000573519 RUBCNQ92622 972 aa13.45□□□□□ -0.26
NPLOC4-213ENST00000573519 SEMA4DQ92854 862 aa13.45□□□□□ -0.26
NPLOC4-213ENST00000573519 CYFIP2Q96F07 1278 aa13.45□□□□□ -0.26
NPLOC4-213ENST00000573519 GTPBP4Q9BZE4 634 aaKnown RBP13.45□□□□□ -0.26
NPLOC4-213ENST00000573519 NACA2Q9H009 215 aa13.45□□□□□ -0.26
NPLOC4-213ENST00000573519 C2orf42Q9NWW7 574 aa13.45□□□□□ -0.26
NPLOC4-213ENST00000573519 RAB20Q9NX57 234 aa13.45□□□□□ -0.26
NPLOC4-213ENST00000573519 GMIPQ9P107 970 aa13.45□□□□□ -0.26
NPLOC4-213ENST00000573519 CFAP97Q9P2B7 532 aa13.45□□□□□ -0.26
NPLOC4-213ENST00000573519 NCDNQ9UBB6 729 aa13.45□□□□□ -0.26
NPLOC4-213ENST00000573519 MAN1B1Q9UKM7 699 aa13.45□□□□□ -0.26
NPLOC4-213ENST00000573519 ZNF638Q14966 1978 aaKnown RBP13.44□□□□□ -0.26
NPLOC4-213ENST00000573519 CHURC1-FNTBB4DL54 471 aa13.44□□□□□ -0.26
NPLOC4-213ENST00000573519 BIN1O00499 593 aa13.44□□□□□ -0.26
NPLOC4-213ENST00000573519 TNFRSF10BO14763 440 aa13.44□□□□□ -0.26
NPLOC4-213ENST00000573519 PSMA7O14818 248 aa13.44□□□□□ -0.26
NPLOC4-213ENST00000573519 SLC16A3O15427 465 aaKnown RBP13.44□□□□□ -0.26
NPLOC4-213ENST00000573519 LILRB5O75023 590 aa13.44□□□□□ -0.26
NPLOC4-213ENST00000573519 RNF40O75150 1001 aa13.44□□□□□ -0.26
NPLOC4-213ENST00000573519 OLFM2O95897 454 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms