RNA–Protein interactions for RNA: ENST00000572253.5

CCDC40-207, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 3,962 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-207ENST00000572253 SLC25A11Q02978 314 aaKnown RBP11.23□□□□□ -0.61
CCDC40-207ENST00000572253 KBTBD12Q3ZCT8 623 aa11.23□□□□□ -0.61
CCDC40-207ENST00000572253 AP1ARQ63HQ0 302 aa11.23□□□□□ -0.61
CCDC40-207ENST00000572253 SPDYE1Q8NFV5 336 aaPredicted RBP11.23□□□□□ -0.61
CCDC40-207ENST00000572253 KCNN1Q92952 543 aa11.23□□□□□ -0.61
CCDC40-207ENST00000572253 FAM161BQ96MY7 647 aa11.23□□□□□ -0.61
CCDC40-207ENST00000572253 POLIQ9UNA4 740 aa11.23□□□□□ -0.61
CCDC40-207ENST00000572253 TRIM49D1C9J1S8 452 aa11.23□□□□□ -0.61
CCDC40-207ENST00000572253 FESP07332 822 aa11.23□□□□□ -0.61
CCDC40-207ENST00000572253 ARL2P36404 184 aa11.23□□□□□ -0.61
CCDC40-207ENST00000572253 AP1B1Q10567 949 aa11.23□□□□□ -0.61
CCDC40-207ENST00000572253 THOC5Q13769 683 aaKnown RBP11.23□□□□□ -0.61
CCDC40-207ENST00000572253 TNFAIP1Q13829 316 aa11.23□□□□□ -0.61
CCDC40-207ENST00000572253 TMEM132AQ24JP5 1023 aa11.23□□□□□ -0.61
CCDC40-207ENST00000572253 TMPRSS6Q8IU80 811 aa11.23□□□□□ -0.61
CCDC40-207ENST00000572253 RTKN2Q8IZC4 609 aa11.23□□□□□ -0.61
CCDC40-207ENST00000572253 ZNF276Q8N554 614 aa11.23□□□□□ -0.61
CCDC40-207ENST00000572253 MTMR14Q8NCE2 650 aa11.23□□□□□ -0.61
CCDC40-207ENST00000572253 APBB2Q92870 758 aa11.23□□□□□ -0.61
CCDC40-207ENST00000572253 DHX33Q9H6R0 707 aaKnown RBP11.23□□□□□ -0.61
CCDC40-207ENST00000572253 ASNSD1Q9NWL6 643 aa11.23□□□□□ -0.61
CCDC40-207ENST00000572253 TAS2R1Q9NYW7 299 aa11.23□□□□□ -0.61
CCDC40-207ENST00000572253 C3orf70A6NLC5 250 aaPredicted RBP11.22□□□□□ -0.61
CCDC40-207ENST00000572253 KLF11O14901 512 aa11.22□□□□□ -0.61
CCDC40-207ENST00000572253 CST3P01034 146 aaPredicted RBP11.22□□□□□ -0.61
CCDC40-207ENST00000572253 PSMC4P43686 418 aa11.22□□□□□ -0.61
CCDC40-207ENST00000572253 NBPF20Q3BBV1 942 aa11.22□□□□□ -0.61
CCDC40-207ENST00000572253 SMYD5Q6GMV2 418 aa11.22□□□□□ -0.61
CCDC40-207ENST00000572253 DENND1BQ6P3S1 775 aa11.22□□□□□ -0.61
CCDC40-207ENST00000572253 RINLQ6ZS11 566 aa11.22□□□□□ -0.61
CCDC40-207ENST00000572253 SERAC1Q96JX3 654 aa11.22□□□□□ -0.61
CCDC40-207ENST00000572253 SRPK1Q96SB4 655 aaKnown RBP11.22□□□□□ -0.61
CCDC40-207ENST00000572253 METTL5Q9NRN9 209 aaKnown RBP11.22□□□□□ -0.61
CCDC40-207ENST00000572253 RGPD3A6NKT7 1758 aaPredicted RBP11.22□□□□□ -0.61
CCDC40-207ENST00000572253 RGPD4Q7Z3J3 1758 aa11.22□□□□□ -0.61
CCDC40-207ENST00000572253 TCRBV7S3A2A0A539 114 aa11.22□□□□□ -0.61
CCDC40-207ENST00000572253 ADCY3O60266 1144 aa11.22□□□□□ -0.61
CCDC40-207ENST00000572253 TOM1L1O75674 476 aa11.22□□□□□ -0.61
CCDC40-207ENST00000572253 DLDP09622 509 aaKnown RBP11.22□□□□□ -0.61
CCDC40-207ENST00000572253 TBCCQ15814 346 aa11.22□□□□□ -0.61
CCDC40-207ENST00000572253 DNAL1Q4LDG9 190 aa11.22□□□□□ -0.61
CCDC40-207ENST00000572253 FAM91A1Q658Y4 838 aa11.22□□□□□ -0.61
CCDC40-207ENST00000572253 CRLF3Q8IUI8 442 aa11.22□□□□□ -0.61
CCDC40-207ENST00000572253 AGBL3Q8NEM8 1001 aa11.22□□□□□ -0.61
CCDC40-207ENST00000572253 JOSD2Q8TAC2 188 aa11.22□□□□□ -0.61
CCDC40-207ENST00000572253 ANKRD36BP1Q96IX9 119 aa11.22□□□□□ -0.61
CCDC40-207ENST00000572253 PAK5Q9P286 719 aa11.22□□□□□ -0.61
CCDC40-207ENST00000572253 MYH9P35579 1960 aaKnown RBP11.22□□□□□ -0.61
CCDC40-207ENST00000572253 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.22□□□□□ -0.61
CCDC40-207ENST00000572253 MAGEA13PA6NCF6 341 aa11.22□□□□□ -0.61
CCDC40-207ENST00000572253 SPATA31C2B4DYI2 1134 aa11.22□□□□□ -0.61
CCDC40-207ENST00000572253 KRT38O76015 456 aa11.22□□□□□ -0.61
CCDC40-207ENST00000572253 RARBP10826 455 aa11.22□□□□□ -0.61
CCDC40-207ENST00000572253 KCNA3P22001 575 aa11.22□□□□□ -0.61
CCDC40-207ENST00000572253 SP100P23497 879 aaPredicted RBP11.22□□□□□ -0.61
CCDC40-207ENST00000572253 ETV4P43268 484 aa11.22□□□□□ -0.61
CCDC40-207ENST00000572253 DGKZQ13574 1117 aa11.22□□□□□ -0.61
CCDC40-207ENST00000572253 ACAP1Q15027 740 aa11.22□□□□□ -0.61
CCDC40-207ENST00000572253 PTPN20Q4JDL3 420 aa11.22□□□□□ -0.61
CCDC40-207ENST00000572253 FAM47CQ5HY64 1035 aa11.22□□□□□ -0.61
CCDC40-207ENST00000572253 ZBTB8OSQ8IWT0 167 aa11.22□□□□□ -0.61
CCDC40-207ENST00000572253 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.22□□□□□ -0.61
CCDC40-207ENST00000572253 PPP1R14CQ8TAE6 165 aa11.22□□□□□ -0.61
CCDC40-207ENST00000572253 TFAP2BQ92481 460 aa11.22□□□□□ -0.61
CCDC40-207ENST00000572253 E2F7Q96AV8 911 aa11.22□□□□□ -0.61
CCDC40-207ENST00000572253 LHX5Q9H2C1 402 aa11.22□□□□□ -0.61
CCDC40-207ENST00000572253 CPSF2Q9P2I0 782 aaKnown RBP11.22□□□□□ -0.61
CCDC40-207ENST00000572253 NXF1Q9UBU9 619 aaKnown RBP11.22□□□□□ -0.61
CCDC40-207ENST00000572253 OGTO15294 1046 aa11.21□□□□□ -0.61
CCDC40-207ENST00000572253 CHADO15335 359 aa11.21□□□□□ -0.61
CCDC40-207ENST00000572253 MAGEC1O60732 1142 aa11.21□□□□□ -0.61
CCDC40-207ENST00000572253 ATP5BP06576 529 aaKnown RBP11.21□□□□□ -0.61
CCDC40-207ENST00000572253 ENO1P06733 434 aaKnown RBP11.21□□□□□ -0.61
CCDC40-207ENST00000572253 IL1R2P27930 398 aa11.21□□□□□ -0.61
CCDC40-207ENST00000572253 NUDCD3Q8IVD9 361 aa11.21□□□□□ -0.61
CCDC40-207ENST00000572253 MAP7D3Q8IWC1 876 aa11.21□□□□□ -0.61
CCDC40-207ENST00000572253 WDTC1Q8N5D0 677 aa11.21□□□□□ -0.61
CCDC40-207ENST00000572253 RILPQ96NA2 401 aa11.21□□□□□ -0.61
CCDC40-207ENST00000572253 QTRT2Q9H974 415 aaKnown RBP11.21□□□□□ -0.61
CCDC40-207ENST00000572253 RIPK3Q9Y572 518 aa11.21□□□□□ -0.61
CCDC40-207ENST00000572253 ADGRA2Q96PE1 1338 aa11.21□□□□□ -0.61
CCDC40-207ENST00000572253 FAM237BA0A1B0GVD1 139 aa11.21□□□□□ -0.61
CCDC40-207ENST00000572253 H3BRJ5 948 aa11.21□□□□□ -0.61
CCDC40-207ENST00000572253 OAZ1P54368 228 aa11.21□□□□□ -0.61
CCDC40-207ENST00000572253 TAZQ16635 292 aa11.21□□□□□ -0.61
CCDC40-207ENST00000572253 TRMT5Q32P41 509 aaKnown RBP11.21□□□□□ -0.61
CCDC40-207ENST00000572253 NIM1KQ8IY84 436 aa11.21□□□□□ -0.61
CCDC40-207ENST00000572253 C7orf26Q96N11 449 aa11.21□□□□□ -0.61
CCDC40-207ENST00000572253 GBP5Q96PP8 586 aa11.21□□□□□ -0.61
CCDC40-207ENST00000572253 SYT15Q9BQS2 421 aa11.21□□□□□ -0.61
CCDC40-207ENST00000572253 NMUR2Q9GZQ4 415 aa11.21□□□□□ -0.61
CCDC40-207ENST00000572253 KLC2Q9H0B6 622 aa11.21□□□□□ -0.61
CCDC40-207ENST00000572253 ACAD9Q9H845 621 aa11.21□□□□□ -0.61
CCDC40-207ENST00000572253 KCNK13Q9HB14 408 aa11.21□□□□□ -0.61
CCDC40-207ENST00000572253 AS3MTQ9HBK9 375 aa11.21□□□□□ -0.61
CCDC40-207ENST00000572253 PAPOLBQ9NRJ5 636 aaKnown RBP11.21□□□□□ -0.61
CCDC40-207ENST00000572253 RAB6BQ9NRW1 208 aa11.21□□□□□ -0.61
CCDC40-207ENST00000572253 ARMCX1Q9P291 453 aa11.21□□□□□ -0.61
CCDC40-207ENST00000572253 ZC3H7BQ9UGR2 993 aaKnown RBP11.21□□□□□ -0.61
CCDC40-207ENST00000572253 F8W8V4 182 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms