RNA–Protein interactions for RNA: ENST00000572043.5

CTDNEP1-207, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDNEP1, Length 857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-207ENST00000572043 NT5C1AQ9BXI3 368 aa18.86■□□□□ 0.61
CTDNEP1-207ENST00000572043 GTPBP4Q9BZE4 634 aaKnown RBP18.86■□□□□ 0.61
CTDNEP1-207ENST00000572043 DUS2Q9NX74 493 aaKnown RBP18.86■□□□□ 0.61
CTDNEP1-207ENST00000572043 ARMCX3Q9UH62 379 aaPredicted RBP18.86■□□□□ 0.61
CTDNEP1-207ENST00000572043 CHORDC1Q9UHD1 332 aaPredicted RBP18.86■□□□□ 0.61
CTDNEP1-207ENST00000572043 PPP1R3GB7ZBB8 358 aa18.85■□□□□ 0.61
CTDNEP1-207ENST00000572043 SCAMP3O14828 347 aaKnown RBP18.85■□□□□ 0.61
CTDNEP1-207ENST00000572043 CILPO75339 1184 aa18.85■□□□□ 0.61
CTDNEP1-207ENST00000572043 RTN3O95197 1032 aaPredicted RBP18.85■□□□□ 0.61
CTDNEP1-207ENST00000572043 FAM200BP0CF97 657 aa18.85■□□□□ 0.61
CTDNEP1-207ENST00000572043 TRIM21P19474 475 aaKnown RBP18.85■□□□□ 0.61
CTDNEP1-207ENST00000572043 MAGEA9P43362 315 aa18.85■□□□□ 0.61
CTDNEP1-207ENST00000572043 RPS9P46781 194 aaKnown RBP18.85■□□□□ 0.61
CTDNEP1-207ENST00000572043 STX17P56962 302 aa18.85■□□□□ 0.61
CTDNEP1-207ENST00000572043 INCA1Q0VD86 236 aa18.85■□□□□ 0.61
CTDNEP1-207ENST00000572043 USP4Q13107 963 aa18.85■□□□□ 0.61
CTDNEP1-207ENST00000572043 MORC3Q14149 939 aa18.85■□□□□ 0.61
CTDNEP1-207ENST00000572043 CCDC40Q4G0X9 1142 aa18.85■□□□□ 0.61
CTDNEP1-207ENST00000572043 WDR44Q5JSH3 913 aa18.85■□□□□ 0.61
CTDNEP1-207ENST00000572043 RALGPS2Q86X27 583 aaPredicted RBP18.85■□□□□ 0.61
CTDNEP1-207ENST00000572043 ZMIZ2Q8NF64 920 aa18.85■□□□□ 0.61
CTDNEP1-207ENST00000572043 WHAMMQ8TF30 809 aa18.85■□□□□ 0.61
CTDNEP1-207ENST00000572043 TATDN2Q93075 761 aa18.85■□□□□ 0.61
CTDNEP1-207ENST00000572043 MSANTD3Q96H12 275 aa18.85■□□□□ 0.61
CTDNEP1-207ENST00000572043 ARID3AQ99856 593 aa18.85■□□□□ 0.61
CTDNEP1-207ENST00000572043 RNF38Q9H0F5 515 aa18.85■□□□□ 0.61
CTDNEP1-207ENST00000572043 MUC6Q6W4X9 2439 aa18.85■□□□□ 0.61
CTDNEP1-207ENST00000572043 COL4A2P08572 1712 aa18.84■□□□□ 0.61
CTDNEP1-207ENST00000572043 IFNAR2P48551 515 aa18.84■□□□□ 0.61
CTDNEP1-207ENST00000572043 MLLT6P55198 1093 aaPredicted RBP18.84■□□□□ 0.61
CTDNEP1-207ENST00000572043 UBE2HP62256 183 aa18.84■□□□□ 0.61
CTDNEP1-207ENST00000572043 ZXDBP98169 803 aa18.84■□□□□ 0.61
CTDNEP1-207ENST00000572043 LRMPQ12912 555 aa18.84■□□□□ 0.61
CTDNEP1-207ENST00000572043 OSCP1Q8WVF1 389 aa18.84■□□□□ 0.61
CTDNEP1-207ENST00000572043 NKD2Q969F2 451 aaPredicted RBP18.84■□□□□ 0.61
CTDNEP1-207ENST00000572043 CYFIP2Q96F07 1278 aa18.84■□□□□ 0.61
CTDNEP1-207ENST00000572043 DUSP9Q99956 384 aaKnown RBP18.84■□□□□ 0.61
CTDNEP1-207ENST00000572043 CHRDQ9H2X0 955 aa18.84■□□□□ 0.61
CTDNEP1-207ENST00000572043 GMIPQ9P107 970 aa18.84■□□□□ 0.61
CTDNEP1-207ENST00000572043 ARHGAP26Q9UNA1 814 aa18.84■□□□□ 0.61
CTDNEP1-207ENST00000572043 CPQQ9Y646 472 aa18.84■□□□□ 0.61
CTDNEP1-207ENST00000572043 PROB1E7EW31 1015 aa18.83■□□□□ 0.6
CTDNEP1-207ENST00000572043 LEFTY2O00292 366 aa18.83■□□□□ 0.6
CTDNEP1-207ENST00000572043 TNFRSF10BO14763 440 aa18.83■□□□□ 0.6
CTDNEP1-207ENST00000572043 MBL2P11226 248 aaPredicted RBP18.83■□□□□ 0.6
CTDNEP1-207ENST00000572043 PPP1R2P41236 205 aa18.83■□□□□ 0.6
CTDNEP1-207ENST00000572043 PPP3CCP48454 512 aa18.83■□□□□ 0.6
CTDNEP1-207ENST00000572043 PDE6CP51160 858 aa18.83■□□□□ 0.6
CTDNEP1-207ENST00000572043 MCCD1P59942 119 aaPredicted RBP18.83■□□□□ 0.6
CTDNEP1-207ENST00000572043 LRRC32Q14392 662 aa18.83■□□□□ 0.6
CTDNEP1-207ENST00000572043 PDGFRLQ15198 375 aa18.83■□□□□ 0.6
CTDNEP1-207ENST00000572043 NAIF1Q69YI7 327 aaPredicted RBP18.83■□□□□ 0.6
CTDNEP1-207ENST00000572043 TTI2Q6NXR4 508 aa18.83■□□□□ 0.6
CTDNEP1-207ENST00000572043 Q6ZS52 159 aa18.83■□□□□ 0.6
CTDNEP1-207ENST00000572043 SLC35C1Q96A29 364 aa18.83■□□□□ 0.6
CTDNEP1-207ENST00000572043 HEXIM2Q96MH2 286 aaKnown RBP18.83■□□□□ 0.6
CTDNEP1-207ENST00000572043 LINC00597Q9H2U6 94 aa18.83■□□□□ 0.6
CTDNEP1-207ENST00000572043 CISHQ9NSE2 258 aa18.83■□□□□ 0.6
CTDNEP1-207ENST00000572043 WDFY4Q6ZS81 3184 aa18.83■□□□□ 0.6
CTDNEP1-207ENST00000572043 TICRRQ7Z2Z1 1910 aa18.82■□□□□ 0.6
CTDNEP1-207ENST00000572043 PRR23AA6NEV1 266 aa18.82■□□□□ 0.6
CTDNEP1-207ENST00000572043 OAS1P00973 400 aaKnown RBP18.82■□□□□ 0.6
CTDNEP1-207ENST00000572043 GAS6Q14393 721 aa18.82■□□□□ 0.6
CTDNEP1-207ENST00000572043 C1orf228Q6PIY5 440 aa18.82■□□□□ 0.6
CTDNEP1-207ENST00000572043 GPRIN1Q7Z2K8 1008 aa18.82■□□□□ 0.6
CTDNEP1-207ENST00000572043 CPA6Q8N4T0 437 aa18.82■□□□□ 0.6
CTDNEP1-207ENST00000572043 PDZD8Q8NEN9 1154 aa18.82■□□□□ 0.6
CTDNEP1-207ENST00000572043 CEP63Q96MT8 703 aa18.82■□□□□ 0.6
CTDNEP1-207ENST00000572043 HNRNPABQ99729 332 aaKnown RBP18.82■□□□□ 0.6
CTDNEP1-207ENST00000572043 ECT2Q9H8V3 914 aa18.82■□□□□ 0.6
CTDNEP1-207ENST00000572043 METTL14Q9HCE5 456 aaKnown RBP18.82■□□□□ 0.6
CTDNEP1-207ENST00000572043 CSNK1G1Q9HCP0 422 aa18.82■□□□□ 0.6
CTDNEP1-207ENST00000572043 BICDL2A1A5D9 508 aa18.81■□□□□ 0.6
CTDNEP1-207ENST00000572043 COCHO43405 550 aa18.81■□□□□ 0.6
CTDNEP1-207ENST00000572043 PGFP49763 221 aa18.81■□□□□ 0.6
CTDNEP1-207ENST00000572043 SLC7A9P82251 487 aa18.81■□□□□ 0.6
CTDNEP1-207ENST00000572043 PAK1Q13153 545 aa18.81■□□□□ 0.6
CTDNEP1-207ENST00000572043 EML3Q32P44 896 aa18.81■□□□□ 0.6
CTDNEP1-207ENST00000572043 PPP1R26Q5T8A7 1209 aaPredicted RBP18.81■□□□□ 0.6
CTDNEP1-207ENST00000572043 CLEC20AQ6ZU45 233 aa18.81■□□□□ 0.6
CTDNEP1-207ENST00000572043 FILIP1Q7Z7B0 1213 aa18.81■□□□□ 0.6
CTDNEP1-207ENST00000572043 CHFRQ96EP1 664 aa18.81■□□□□ 0.6
CTDNEP1-207ENST00000572043 TMEM176AQ96HP8 235 aa18.81■□□□□ 0.6
CTDNEP1-207ENST00000572043 CCSER2Q9H7U1 834 aa18.81■□□□□ 0.6
CTDNEP1-207ENST00000572043 CFAP97Q9P2B7 532 aa18.81■□□□□ 0.6
CTDNEP1-207ENST00000572043 FBXO4Q9UKT5 387 aa18.81■□□□□ 0.6
CTDNEP1-207ENST00000572043 NUP210Q8TEM1 1887 aaPredicted RBP18.81■□□□□ 0.6
CTDNEP1-207ENST00000572043 OLFM2O95897 454 aa18.8■□□□□ 0.6
CTDNEP1-207ENST00000572043 PFKLP17858 780 aa18.8■□□□□ 0.6
CTDNEP1-207ENST00000572043 ACO1P21399 889 aaKnown RBP18.8■□□□□ 0.6
CTDNEP1-207ENST00000572043 GJA4P35212 333 aa18.8■□□□□ 0.6
CTDNEP1-207ENST00000572043 FMO5P49326 533 aa18.8■□□□□ 0.6
CTDNEP1-207ENST00000572043 RAD23BP54727 409 aa18.8■□□□□ 0.6
CTDNEP1-207ENST00000572043 SATB1Q01826 763 aa18.8■□□□□ 0.6
CTDNEP1-207ENST00000572043 CUL2Q13617 745 aa18.8■□□□□ 0.6
CTDNEP1-207ENST00000572043 HECTD3Q5T447 861 aa18.8■□□□□ 0.6
CTDNEP1-207ENST00000572043 ZC3H14Q6PJT7 736 aaKnown RBP18.8■□□□□ 0.6
CTDNEP1-207ENST00000572043 OVCA2Q8WZ82 227 aa18.8■□□□□ 0.6
CTDNEP1-207ENST00000572043 ATP2A3Q93084 1043 aa18.8■□□□□ 0.6
CTDNEP1-207ENST00000572043 DNAI2Q9GZS0 605 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms