RNA–Protein interactions for RNA: ENST00000570758.1

CHD3-212, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 174 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-212ENST00000570758 RUNX3Q13761 415 aa5.74□□□□□ -1.49
CHD3-212ENST00000570758 MORC3Q14149 939 aa5.74□□□□□ -1.49
CHD3-212ENST00000570758 PON2Q15165 354 aa5.74□□□□□ -1.49
CHD3-212ENST00000570758 ITPRIPL2Q3MIP1 535 aa5.74□□□□□ -1.49
CHD3-212ENST00000570758 CBWD6Q4V339 395 aa5.74□□□□□ -1.49
CHD3-212ENST00000570758 CBWD3Q5JTY5 395 aa5.74□□□□□ -1.49
CHD3-212ENST00000570758 CBWD5Q5RIA9 395 aa5.74□□□□□ -1.49
CHD3-212ENST00000570758 KRT39Q6A163 491 aa5.74□□□□□ -1.49
CHD3-212ENST00000570758 KLHL10Q6JEL2 608 aa5.74□□□□□ -1.49
CHD3-212ENST00000570758 TTI2Q6NXR4 508 aa5.74□□□□□ -1.49
CHD3-212ENST00000570758 PKN3Q6P5Z2 889 aa5.74□□□□□ -1.49
CHD3-212ENST00000570758 GPRIN1Q7Z2K8 1008 aa5.74□□□□□ -1.49
CHD3-212ENST00000570758 UNC93AQ86WB7 457 aa5.74□□□□□ -1.49
CHD3-212ENST00000570758 RALGPS2Q86X27 583 aaPredicted RBP5.74□□□□□ -1.49
CHD3-212ENST00000570758 ELOA2Q8IYF1 753 aaPredicted RBP5.74□□□□□ -1.49
CHD3-212ENST00000570758 TTC16Q8NEE8 873 aa5.74□□□□□ -1.49
CHD3-212ENST00000570758 SLC2A14Q8TDB8 520 aa5.74□□□□□ -1.49
CHD3-212ENST00000570758 TATDN2Q93075 761 aa5.74□□□□□ -1.49
CHD3-212ENST00000570758 NKD2Q969F2 451 aaPredicted RBP5.74□□□□□ -1.49
CHD3-212ENST00000570758 SMARCD1Q96GM5 515 aa5.74□□□□□ -1.49
CHD3-212ENST00000570758 MSANTD3Q96H12 275 aa5.74□□□□□ -1.49
CHD3-212ENST00000570758 TNIP3Q96KP6 325 aa5.74□□□□□ -1.49
CHD3-212ENST00000570758 TSG101Q99816 390 aa5.74□□□□□ -1.49
CHD3-212ENST00000570758 ARID3AQ99856 593 aa5.74□□□□□ -1.49
CHD3-212ENST00000570758 DUSP9Q99956 384 aaKnown RBP5.74□□□□□ -1.49
CHD3-212ENST00000570758 LINC00597Q9H2U6 94 aa5.74□□□□□ -1.49
CHD3-212ENST00000570758 CYP3A43Q9HB55 503 aa5.74□□□□□ -1.49
CHD3-212ENST00000570758 FBRSL1Q9HCM7 1045 aaKnown RBP5.74□□□□□ -1.49
CHD3-212ENST00000570758 CSNK1G1Q9HCP0 422 aa5.74□□□□□ -1.49
CHD3-212ENST00000570758 DMAP1Q9NPF5 467 aaPredicted RBP5.74□□□□□ -1.49
CHD3-212ENST00000570758 KRT82Q9NSB4 513 aa5.74□□□□□ -1.49
CHD3-212ENST00000570758 C2orf42Q9NWW7 574 aa5.74□□□□□ -1.49
CHD3-212ENST00000570758 RAB20Q9NX57 234 aa5.74□□□□□ -1.49
CHD3-212ENST00000570758 DUS2Q9NX74 493 aaKnown RBP5.74□□□□□ -1.49
CHD3-212ENST00000570758 IL37Q9NZH6 218 aa5.74□□□□□ -1.49
CHD3-212ENST00000570758 TRPM5Q9NZQ8 1165 aa5.74□□□□□ -1.49
CHD3-212ENST00000570758 GMIPQ9P107 970 aa5.74□□□□□ -1.49
CHD3-212ENST00000570758 CHORDC1Q9UHD1 332 aaPredicted RBP5.74□□□□□ -1.49
CHD3-212ENST00000570758 FBXO4Q9UKT5 387 aa5.74□□□□□ -1.49
CHD3-212ENST00000570758 ARHGAP26Q9UNA1 814 aa5.74□□□□□ -1.49
CHD3-212ENST00000570758 CPQQ9Y646 472 aa5.74□□□□□ -1.49
CHD3-212ENST00000570758 F5P12259 2224 aa5.74□□□□□ -1.49
CHD3-212ENST00000570758 CACNA1IQ9P0X4 2223 aa5.74□□□□□ -1.49
CHD3-212ENST00000570758 FAM92AA1XBS5 289 aa5.73□□□□□ -1.49
CHD3-212ENST00000570758 PPP1R3GB7ZBB8 358 aa5.73□□□□□ -1.49
CHD3-212ENST00000570758 SLC16A3O15427 465 aaKnown RBP5.73□□□□□ -1.49
CHD3-212ENST00000570758 COCHO43405 550 aa5.73□□□□□ -1.49
CHD3-212ENST00000570758 RTN3O95197 1032 aaPredicted RBP5.73□□□□□ -1.49
CHD3-212ENST00000570758 EGFP01133 1207 aa5.73□□□□□ -1.49
CHD3-212ENST00000570758 FAM200BP0CF97 657 aa5.73□□□□□ -1.49
CHD3-212ENST00000570758 PFKLP17858 780 aa5.73□□□□□ -1.49
CHD3-212ENST00000570758 GJA4P35212 333 aa5.73□□□□□ -1.49
CHD3-212ENST00000570758 PPP3CCP48454 512 aa5.73□□□□□ -1.49
CHD3-212ENST00000570758 IFNAR2P48551 515 aa5.73□□□□□ -1.49
CHD3-212ENST00000570758 RAD23BP54727 409 aa5.73□□□□□ -1.49
CHD3-212ENST00000570758 STX17P56962 302 aa5.73□□□□□ -1.49
CHD3-212ENST00000570758 SLC7A9P82251 487 aa5.73□□□□□ -1.49
CHD3-212ENST00000570758 SATB1Q01826 763 aa5.73□□□□□ -1.49
CHD3-212ENST00000570758 LRRC63Q05C16 580 aa5.73□□□□□ -1.49
CHD3-212ENST00000570758 CCINQ13939 588 aa5.73□□□□□ -1.49
CHD3-212ENST00000570758 LRRC32Q14392 662 aa5.73□□□□□ -1.49
CHD3-212ENST00000570758 PDGFRLQ15198 375 aa5.73□□□□□ -1.49
CHD3-212ENST00000570758 GAB4Q2WGN9 574 aa5.73□□□□□ -1.49
CHD3-212ENST00000570758 EML3Q32P44 896 aa5.73□□□□□ -1.49
CHD3-212ENST00000570758 ZNF528Q3MIS6 628 aa5.73□□□□□ -1.49
CHD3-212ENST00000570758 ZNF394Q53GI3 561 aa5.73□□□□□ -1.49
CHD3-212ENST00000570758 DCAF17Q5H9S7 520 aaPredicted RBP5.73□□□□□ -1.49
CHD3-212ENST00000570758 TMEM196Q5HYL7 178 aa5.73□□□□□ -1.49
CHD3-212ENST00000570758 DGKKQ5KSL6 1271 aa5.73□□□□□ -1.49
CHD3-212ENST00000570758 TCERG1LQ5VWI1 586 aa5.73□□□□□ -1.49
CHD3-212ENST00000570758 FSTL4Q6MZW2 842 aa5.73□□□□□ -1.49
CHD3-212ENST00000570758 CC2D1AQ6P1N0 951 aaPredicted RBP5.73□□□□□ -1.49
CHD3-212ENST00000570758 C1orf228Q6PIY5 440 aa5.73□□□□□ -1.49
CHD3-212ENST00000570758 FBXL13Q8NEE6 735 aa5.73□□□□□ -1.49
CHD3-212ENST00000570758 OSCP1Q8WVF1 389 aa5.73□□□□□ -1.49
CHD3-212ENST00000570758 NELFBQ8WX92 580 aa5.73□□□□□ -1.49
CHD3-212ENST00000570758 EZH1Q92800 747 aaPredicted RBP5.73□□□□□ -1.49
CHD3-212ENST00000570758 NELL1Q92832 810 aa5.73□□□□□ -1.49
CHD3-212ENST00000570758 FBXO32Q969P5 355 aa5.73□□□□□ -1.49
CHD3-212ENST00000570758 WBP2Q969T9 261 aa5.73□□□□□ -1.49
CHD3-212ENST00000570758 JAKMIP2Q96AA8 810 aa5.73□□□□□ -1.49
CHD3-212ENST00000570758 DHTKD1Q96HY7 919 aaPredicted RBP5.73□□□□□ -1.49
CHD3-212ENST00000570758 HNRNPABQ99729 332 aaKnown RBP5.73□□□□□ -1.49
CHD3-212ENST00000570758 NT5C1AQ9BXI3 368 aa5.73□□□□□ -1.49
CHD3-212ENST00000570758 IMPG2Q9BZV3 1241 aa5.73□□□□□ -1.49
CHD3-212ENST00000570758 CCSER2Q9H7U1 834 aa5.73□□□□□ -1.49
CHD3-212ENST00000570758 ECT2Q9H8V3 914 aa5.73□□□□□ -1.49
CHD3-212ENST00000570758 CISHQ9NSE2 258 aa5.73□□□□□ -1.49
CHD3-212ENST00000570758 POLR3BQ9NW08 1133 aaPredicted RBP5.73□□□□□ -1.49
CHD3-212ENST00000570758 SMPD4Q9NXE4 827 aa5.73□□□□□ -1.49
CHD3-212ENST00000570758 EHD2Q9NZN4 543 aa5.73□□□□□ -1.49
CHD3-212ENST00000570758 CHMP5Q9NZZ3 219 aa5.73□□□□□ -1.49
CHD3-212ENST00000570758 CFAP97Q9P2B7 532 aa5.73□□□□□ -1.49
CHD3-212ENST00000570758 HOOK1Q9UJC3 728 aaKnown RBP5.73□□□□□ -1.49
CHD3-212ENST00000570758 CTNND2Q9UQB3 1225 aa5.73□□□□□ -1.49
CHD3-212ENST00000570758 COQ4Q9Y3A0 265 aa5.73□□□□□ -1.49
CHD3-212ENST00000570758 ZNF638Q14966 1978 aaKnown RBP5.73□□□□□ -1.49
CHD3-212ENST00000570758 ANTXRLA6NF34 631 aa5.72□□□□□ -1.49
CHD3-212ENST00000570758 CHURC1-FNTBB4DL54 471 aa5.72□□□□□ -1.49
CHD3-212ENST00000570758 K7ESF4 209 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms