RNA–Protein interactions for RNA: ENST00000570546.5

CIITA-204, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 2

Gene CIITA, Length 5,342 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-204ENST00000570546 ZBTB24O43167 697 aaPredicted RBP15.91■□□□□ 0.14
CIITA-204ENST00000570546 PCSK1P29120 753 aa15.91■□□□□ 0.14
CIITA-204ENST00000570546 AVPR1AP37288 418 aa15.91■□□□□ 0.14
CIITA-204ENST00000570546 BMPR2Q13873 1038 aa15.91■□□□□ 0.14
CIITA-204ENST00000570546 ZNF484Q5JVG2 852 aa15.91■□□□□ 0.14
CIITA-204ENST00000570546 RNF219Q5W0B1 726 aaPredicted RBP15.91■□□□□ 0.14
CIITA-204ENST00000570546 MFSD7Q6UXD7 560 aa15.91■□□□□ 0.14
CIITA-204ENST00000570546 APLFQ8IW19 511 aaPredicted RBP15.91■□□□□ 0.14
CIITA-204ENST00000570546 ASIC4Q96FT7 647 aa15.91■□□□□ 0.14
CIITA-204ENST00000570546 CPB2Q96IY4 423 aa15.91■□□□□ 0.14
CIITA-204ENST00000570546 SUPT3HB4E1H0 165 aa15.91■□□□□ 0.14
CIITA-204ENST00000570546 SUPT3HO75486 399 aa15.91■□□□□ 0.14
CIITA-204ENST00000570546 HMOX2P30519 316 aa15.91■□□□□ 0.14
CIITA-204ENST00000570546 SERPINB5P36952 375 aa15.91■□□□□ 0.14
CIITA-204ENST00000570546 ARHGEF6Q15052 776 aa15.91■□□□□ 0.14
CIITA-204ENST00000570546 EPS8L1Q8TE68 723 aa15.91■□□□□ 0.14
CIITA-204ENST00000570546 NAF1Q96HR8 494 aaKnown RBP15.91■□□□□ 0.14
CIITA-204ENST00000570546 EIF2AQ9BY44 585 aaKnown RBP15.91■□□□□ 0.14
CIITA-204ENST00000570546 KCTD10Q9H3F6 313 aa15.91■□□□□ 0.14
CIITA-204ENST00000570546 DNPEPQ9ULA0 475 aa15.91■□□□□ 0.14
CIITA-204ENST00000570546 AP4E1Q9UPM8 1137 aa15.91■□□□□ 0.14
CIITA-204ENST00000570546 DTNAQ9Y4J8 743 aa15.91■□□□□ 0.14
CIITA-204ENST00000570546 EPHB2P29323 1055 aa15.9■□□□□ 0.14
CIITA-204ENST00000570546 ATICP31939 592 aa15.9■□□□□ 0.14
CIITA-204ENST00000570546 LAMTOR4Q0VGL1 99 aa15.9■□□□□ 0.14
CIITA-204ENST00000570546 MFSD14CQ5VZR4 134 aa15.9■□□□□ 0.14
CIITA-204ENST00000570546 CYGBQ8WWM9 190 aa15.9■□□□□ 0.14
CIITA-204ENST00000570546 ADNPQ9H2P0 1102 aa15.9■□□□□ 0.14
CIITA-204ENST00000570546 CYP3A43Q9HB55 503 aa15.9■□□□□ 0.14
CIITA-204ENST00000570546 RRN3P2A6NIE6 340 aa15.9■□□□□ 0.14
CIITA-204ENST00000570546 MEIS2O14770 477 aa15.9■□□□□ 0.14
CIITA-204ENST00000570546 HSPA1AP0DMV8 641 aaKnown RBP15.9■□□□□ 0.14
CIITA-204ENST00000570546 HSPA1BP0DMV9 641 aaKnown RBP15.9■□□□□ 0.14
CIITA-204ENST00000570546 ELK3P41970 407 aa15.9■□□□□ 0.14
CIITA-204ENST00000570546 YTHDF3Q7Z739 585 aaKnown RBP15.9■□□□□ 0.14
CIITA-204ENST00000570546 ZCCHC9Q8N567 271 aaKnown RBP15.9■□□□□ 0.14
CIITA-204ENST00000570546 TCP10LQ8TDR4 215 aa15.9■□□□□ 0.14
CIITA-204ENST00000570546 KAT5Q92993 513 aa15.9■□□□□ 0.14
CIITA-204ENST00000570546 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.9■□□□□ 0.14
CIITA-204ENST00000570546 NDUFS3O75489 264 aa15.9■□□□□ 0.14
CIITA-204ENST00000570546 CYP1A2P05177 515 aa15.9■□□□□ 0.14
CIITA-204ENST00000570546 HMBSP08397 361 aa15.9■□□□□ 0.14
CIITA-204ENST00000570546 LAYNQ6UX15 382 aa15.9■□□□□ 0.14
CIITA-204ENST00000570546 LRP10Q7Z4F1 713 aa15.9■□□□□ 0.14
CIITA-204ENST00000570546 APBB2Q92870 758 aa15.9■□□□□ 0.14
CIITA-204ENST00000570546 TRIM54Q9BYV2 358 aa15.9■□□□□ 0.14
CIITA-204ENST00000570546 MYLK2Q9H1R3 596 aa15.9■□□□□ 0.14
CIITA-204ENST00000570546 KLK14Q9P0G3 267 aa15.9■□□□□ 0.14
CIITA-204ENST00000570546 CTNNAL1Q9UBT7 734 aa15.9■□□□□ 0.14
CIITA-204ENST00000570546 PSMD10O75832 226 aa15.9■□□□□ 0.14
CIITA-204ENST00000570546 ESRRBO95718 433 aa15.9■□□□□ 0.14
CIITA-204ENST00000570546 WASHC2DQ5SRD0 308 aa15.9■□□□□ 0.14
CIITA-204ENST00000570546 SLFN11Q7Z7L1 901 aa15.9■□□□□ 0.14
CIITA-204ENST00000570546 SGF29Q96ES7 293 aa15.9■□□□□ 0.14
CIITA-204ENST00000570546 PCYOX1Q9UHG3 505 aa15.9■□□□□ 0.14
CIITA-204ENST00000570546 SRRM3A6NNA2 597 aaPredicted RBP15.89■□□□□ 0.13
CIITA-204ENST00000570546 ANXA9O76027 345 aa15.89■□□□□ 0.13
CIITA-204ENST00000570546 THRAP10827 490 aa15.89■□□□□ 0.13
CIITA-204ENST00000570546 PPATQ06203 517 aa15.89■□□□□ 0.13
CIITA-204ENST00000570546 ECM1Q16610 540 aa15.89■□□□□ 0.13
CIITA-204ENST00000570546 IFNEQ86WN2 208 aa15.89■□□□□ 0.13
CIITA-204ENST00000570546 KATNAL2Q8IYT4 538 aa15.89■□□□□ 0.13
CIITA-204ENST00000570546 GFM2Q969S9 779 aaKnown RBP15.89■□□□□ 0.13
CIITA-204ENST00000570546 MKL1Q969V6 931 aa15.89■□□□□ 0.13
CIITA-204ENST00000570546 SLC13A4Q9UKG4 626 aa15.89■□□□□ 0.13
CIITA-204ENST00000570546 TMEM247A6NEH6 219 aa15.89■□□□□ 0.13
CIITA-204ENST00000570546 CXCL8P10145 99 aa15.89■□□□□ 0.13
CIITA-204ENST00000570546 C15orf52Q6ZUT6 534 aaKnown RBP15.89■□□□□ 0.13
CIITA-204ENST00000570546 GTF3C2Q8WUA4 911 aaPredicted RBP15.89■□□□□ 0.13
CIITA-204ENST00000570546 TEKT4Q8WW24 435 aa15.89■□□□□ 0.13
CIITA-204ENST00000570546 TMEM237Q96Q45 408 aa15.89■□□□□ 0.13
CIITA-204ENST00000570546 IL1RL2Q9HB29 575 aa15.89■□□□□ 0.13
CIITA-204ENST00000570546 DDIT4Q9NX09 232 aa15.89■□□□□ 0.13
CIITA-204ENST00000570546 SCHIP1Q9P0W5 487 aaPredicted RBP15.89■□□□□ 0.13
CIITA-204ENST00000570546 TMCC1O94876 653 aa15.89■□□□□ 0.13
CIITA-204ENST00000570546 SSTR1P30872 391 aa15.89■□□□□ 0.13
CIITA-204ENST00000570546 GPRC5AQ8NFJ5 357 aa15.89■□□□□ 0.13
CIITA-204ENST00000570546 WDCPQ9H6R7 721 aa15.89■□□□□ 0.13
CIITA-204ENST00000570546 LRRC40Q9H9A6 602 aa15.89■□□□□ 0.13
CIITA-204ENST00000570546 ABT1Q9ULW3 272 aaKnown RBP15.89■□□□□ 0.13
CIITA-204ENST00000570546 FAM83EQ2M2I3 478 aa15.89■□□□□ 0.13
CIITA-204ENST00000570546 FOXR2Q6PJQ5 311 aa15.89■□□□□ 0.13
CIITA-204ENST00000570546 FUKQ8N0W3 1084 aa15.89■□□□□ 0.13
CIITA-204ENST00000570546 THAP11Q96EK4 314 aa15.89■□□□□ 0.13
CIITA-204ENST00000570546 HES6Q96HZ4 224 aa15.89■□□□□ 0.13
CIITA-204ENST00000570546 APOPT1Q96IL0 206 aa15.89■□□□□ 0.13
CIITA-204ENST00000570546 CNBD2Q96M20 576 aa15.89■□□□□ 0.13
CIITA-204ENST00000570546 GID8Q9NWU2 228 aa15.89■□□□□ 0.13
CIITA-204ENST00000570546 RUVBL2Q9Y230 463 aaKnown RBP15.89■□□□□ 0.13
CIITA-204ENST00000570546 TIMM44O43615 452 aa15.88■□□□□ 0.13
CIITA-204ENST00000570546 GJB6O95452 261 aa15.88■□□□□ 0.13
CIITA-204ENST00000570546 RALBP11234 206 aa15.88■□□□□ 0.13
CIITA-204ENST00000570546 CYP2F1P24903 491 aa15.88■□□□□ 0.13
CIITA-204ENST00000570546 HSPA13P48723 471 aa15.88■□□□□ 0.13
CIITA-204ENST00000570546 BCAT1P54687 386 aa15.88■□□□□ 0.13
CIITA-204ENST00000570546 ZNF555Q8NEP9 628 aa15.88■□□□□ 0.13
CIITA-204ENST00000570546 RFWD2Q8NHY2 731 aa15.88■□□□□ 0.13
CIITA-204ENST00000570546 CCT7Q99832 543 aa15.88■□□□□ 0.13
CIITA-204ENST00000570546 MYO1DO94832 1006 aa15.88■□□□□ 0.13
CIITA-204ENST00000570546 ELF3P78545 371 aaPredicted RBP15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms