RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 ITSN1Q15811 1721 aa4.13□□□□□ -1.75
HMGB1P6-201ENST00000569046 A6NNZ2 444 aa4.13□□□□□ -1.75
HMGB1P6-201ENST00000569046 DCLK1O15075 740 aa4.13□□□□□ -1.75
HMGB1P6-201ENST00000569046 YY2O15391 372 aa4.13□□□□□ -1.75
HMGB1P6-201ENST00000569046 CTNND1O60716 968 aaKnown RBP4.13□□□□□ -1.75
HMGB1P6-201ENST00000569046 UNC5CO95185 931 aa4.13□□□□□ -1.75
HMGB1P6-201ENST00000569046 GNAI2P04899 355 aa4.13□□□□□ -1.75
HMGB1P6-201ENST00000569046 PIM1P11309 404 aaPredicted RBP4.13□□□□□ -1.75
HMGB1P6-201ENST00000569046 CXCR5P32302 372 aa4.13□□□□□ -1.75
HMGB1P6-201ENST00000569046 FOLR3P41439 243 aa4.13□□□□□ -1.75
HMGB1P6-201ENST00000569046 AGFG1P52594 562 aaKnown RBP4.13□□□□□ -1.75
HMGB1P6-201ENST00000569046 ZNF134P52741 427 aa4.13□□□□□ -1.75
HMGB1P6-201ENST00000569046 FGL2Q14314 439 aa4.13□□□□□ -1.75
HMGB1P6-201ENST00000569046 PRR16Q569H4 304 aa4.13□□□□□ -1.75
HMGB1P6-201ENST00000569046 NXNQ6DKJ4 435 aa4.13□□□□□ -1.75
HMGB1P6-201ENST00000569046 SWSAP1Q6NVH7 229 aa4.13□□□□□ -1.75
HMGB1P6-201ENST00000569046 NPNTQ6UXI9 565 aa4.13□□□□□ -1.75
HMGB1P6-201ENST00000569046 TICAM2Q86XR7 235 aa4.13□□□□□ -1.75
HMGB1P6-201ENST00000569046 MAGEB6Q8N7X4 407 aa4.13□□□□□ -1.75
HMGB1P6-201ENST00000569046 SIMC1Q8NDZ2 872 aa4.13□□□□□ -1.75
HMGB1P6-201ENST00000569046 NGDNQ8NEJ9 315 aaKnown RBP4.13□□□□□ -1.75
HMGB1P6-201ENST00000569046 TOR1AIP2Q8NFQ8 470 aa4.13□□□□□ -1.75
HMGB1P6-201ENST00000569046 ACTRT2Q8TDY3 377 aa4.13□□□□□ -1.75
HMGB1P6-201ENST00000569046 TFAP2BQ92481 460 aa4.13□□□□□ -1.75
HMGB1P6-201ENST00000569046 PDLIM2Q96JY6 352 aa4.13□□□□□ -1.75
HMGB1P6-201ENST00000569046 P2RX7Q99572 595 aaKnown RBP4.13□□□□□ -1.75
HMGB1P6-201ENST00000569046 B3GNT5Q9BYG0 378 aa4.13□□□□□ -1.75
HMGB1P6-201ENST00000569046 ATP6V0A4Q9HBG4 840 aa4.13□□□□□ -1.75
HMGB1P6-201ENST00000569046 HESX1Q9UBX0 185 aa4.13□□□□□ -1.75
HMGB1P6-201ENST00000569046 DMTF1Q9Y222 760 aa4.13□□□□□ -1.75
HMGB1P6-201ENST00000569046 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.13□□□□□ -1.75
HMGB1P6-201ENST00000569046 TUBGCP6Q96RT7 1819 aa4.13□□□□□ -1.75
HMGB1P6-201ENST00000569046 RPGRIP1LQ68CZ1 1315 aa4.13□□□□□ -1.75
HMGB1P6-201ENST00000569046 LRRC37A3O60309 1634 aa4.13□□□□□ -1.75
HMGB1P6-201ENST00000569046 ABCC11Q96J66 1382 aa4.13□□□□□ -1.75
HMGB1P6-201ENST00000569046 NINLQ9Y2I6 1382 aa4.13□□□□□ -1.75
HMGB1P6-201ENST00000569046 PRAG1Q86YV5 1406 aa4.12□□□□□ -1.75
HMGB1P6-201ENST00000569046 SHANK3Q9BYB0 1731 aa4.12□□□□□ -1.75
HMGB1P6-201ENST00000569046 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.12□□□□□ -1.75
HMGB1P6-201ENST00000569046 A0A0B4J269 797 aa4.12□□□□□ -1.75
HMGB1P6-201ENST00000569046 WDR27A2RRH5 827 aa4.12□□□□□ -1.75
HMGB1P6-201ENST00000569046 ADM5C9JUS6 153 aa4.12□□□□□ -1.75
HMGB1P6-201ENST00000569046 F5H697 171 aa4.12□□□□□ -1.75
HMGB1P6-201ENST00000569046 PEX1O43933 1283 aa4.12□□□□□ -1.75
HMGB1P6-201ENST00000569046 RHOP08100 348 aa4.12□□□□□ -1.75
HMGB1P6-201ENST00000569046 CHRM2P08172 466 aa4.12□□□□□ -1.75
HMGB1P6-201ENST00000569046 ELFN1P0C7U0 828 aa4.12□□□□□ -1.75
HMGB1P6-201ENST00000569046 NPR1P16066 1061 aa4.12□□□□□ -1.75
HMGB1P6-201ENST00000569046 RARRES1P49788 294 aa4.12□□□□□ -1.75
HMGB1P6-201ENST00000569046 NDUFV1P49821 464 aa4.12□□□□□ -1.75
HMGB1P6-201ENST00000569046 MRPS35P82673 323 aaKnown RBP4.12□□□□□ -1.75
HMGB1P6-201ENST00000569046 TUBB3Q13509 450 aa4.12□□□□□ -1.75
HMGB1P6-201ENST00000569046 MLC1Q15049 377 aa4.12□□□□□ -1.75
HMGB1P6-201ENST00000569046 GPR162Q16538 588 aa4.12□□□□□ -1.75
HMGB1P6-201ENST00000569046 ANO6Q4KMQ2 910 aa4.12□□□□□ -1.75
HMGB1P6-201ENST00000569046 ZNF362Q5T0B9 420 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P6-201ENST00000569046 RBM20Q5T481 1227 aaKnown RBP4.12□□□□□ -1.75
HMGB1P6-201ENST00000569046 VPS53Q5VIR6 699 aa4.12□□□□□ -1.75
HMGB1P6-201ENST00000569046 FAM160B1Q5W0V3 765 aa4.12□□□□□ -1.75
HMGB1P6-201ENST00000569046 C14orf80Q86SX3 495 aa4.12□□□□□ -1.75
HMGB1P6-201ENST00000569046 DAAM2Q86T65 1068 aa4.12□□□□□ -1.75
HMGB1P6-201ENST00000569046 ZG16BQ96DA0 208 aa4.12□□□□□ -1.75
HMGB1P6-201ENST00000569046 MTFMTQ96DP5 389 aaKnown RBP4.12□□□□□ -1.75
HMGB1P6-201ENST00000569046 FBXL20Q96IG2 436 aa4.12□□□□□ -1.75
HMGB1P6-201ENST00000569046 SLC46A1Q96NT5 459 aa4.12□□□□□ -1.75
HMGB1P6-201ENST00000569046 AMBRA1Q9C0C7 1298 aa4.12□□□□□ -1.75
HMGB1P6-201ENST00000569046 SARS2Q9NP81 518 aaKnown RBP4.12□□□□□ -1.75
HMGB1P6-201ENST00000569046 CHST12Q9NRB3 414 aa4.12□□□□□ -1.75
HMGB1P6-201ENST00000569046 DDX20Q9UHI6 824 aaKnown RBP4.12□□□□□ -1.75
HMGB1P6-201ENST00000569046 ZNHIT2Q9UHR6 403 aa4.12□□□□□ -1.75
HMGB1P6-201ENST00000569046 RAD54BQ9Y620 910 aa4.12□□□□□ -1.75
HMGB1P6-201ENST00000569046 LMO7Q8WWI1 1683 aa4.12□□□□□ -1.75
HMGB1P6-201ENST00000569046 GPRASP1Q5JY77 1395 aa4.12□□□□□ -1.75
HMGB1P6-201ENST00000569046 ARHGEF17Q96PE2 2063 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P6-201ENST00000569046 RGPD3A6NKT7 1758 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P6-201ENST00000569046 RGPD4Q7Z3J3 1758 aa4.12□□□□□ -1.75
HMGB1P6-201ENST00000569046 SSH2Q76I76 1423 aa4.12□□□□□ -1.75
HMGB1P6-201ENST00000569046 ZAR1LA6NP61 321 aa4.11□□□□□ -1.75
HMGB1P6-201ENST00000569046 MPPED1O15442 326 aa4.11□□□□□ -1.75
HMGB1P6-201ENST00000569046 NUDT3O95989 172 aa4.11□□□□□ -1.75
HMGB1P6-201ENST00000569046 PDHA1P08559 390 aa4.11□□□□□ -1.75
HMGB1P6-201ENST00000569046 KITP10721 976 aa4.11□□□□□ -1.75
HMGB1P6-201ENST00000569046 GCLCP48506 637 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P6-201ENST00000569046 KCNJ5P48544 419 aa4.11□□□□□ -1.75
HMGB1P6-201ENST00000569046 ARFIP2P53365 341 aa4.11□□□□□ -1.75
HMGB1P6-201ENST00000569046 MAPK10P53779 464 aa4.11□□□□□ -1.75
HMGB1P6-201ENST00000569046 NANOS3P60323 173 aaKnown RBP4.11□□□□□ -1.75
HMGB1P6-201ENST00000569046 LLGL1Q15334 1064 aa4.11□□□□□ -1.75
HMGB1P6-201ENST00000569046 TXNRD1Q16881 649 aa4.11□□□□□ -1.75
HMGB1P6-201ENST00000569046 MINDY4Q4G0A6 757 aa4.11□□□□□ -1.75
HMGB1P6-201ENST00000569046 C4orf46Q504U0 113 aa4.11□□□□□ -1.75
HMGB1P6-201ENST00000569046 SYCP2LQ5T4T6 812 aa4.11□□□□□ -1.75
HMGB1P6-201ENST00000569046 TMEM108Q6UXF1 575 aa4.11□□□□□ -1.75
HMGB1P6-201ENST00000569046 PEG10Q86TG7 708 aaKnown RBP4.11□□□□□ -1.75
HMGB1P6-201ENST00000569046 KIAA0319LQ8IZA0 1049 aa4.11□□□□□ -1.75
HMGB1P6-201ENST00000569046 FAM109AQ8N4B1 249 aa4.11□□□□□ -1.75
HMGB1P6-201ENST00000569046 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.11□□□□□ -1.75
HMGB1P6-201ENST00000569046 OSBPL9Q96SU4 736 aa4.11□□□□□ -1.75
HMGB1P6-201ENST00000569046 TTYH3Q9C0H2 523 aa4.11□□□□□ -1.75
HMGB1P6-201ENST00000569046 SIK2Q9H0K1 926 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms