RNA–Protein interactions for RNA: ENST00000568691.5

VPS9D1-207, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 838 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-207ENST00000568691 ATXN7O15265 892 aaPredicted RBP12.78□□□□□ -0.36
VPS9D1-207ENST00000568691 DKK1O94907 266 aa12.78□□□□□ -0.36
VPS9D1-207ENST00000568691 LRPAP1P30533 357 aa12.78□□□□□ -0.36
VPS9D1-207ENST00000568691 RDXP35241 583 aaKnown RBP12.78□□□□□ -0.36
VPS9D1-207ENST00000568691 CYP4F3Q08477 520 aa12.78□□□□□ -0.36
VPS9D1-207ENST00000568691 PAK1Q13153 545 aa12.78□□□□□ -0.36
VPS9D1-207ENST00000568691 MTF1Q14872 753 aa12.78□□□□□ -0.36
VPS9D1-207ENST00000568691 DUOXA1Q1HG43 343 aa12.78□□□□□ -0.36
VPS9D1-207ENST00000568691 EMC10Q5UCC4 262 aa12.78□□□□□ -0.36
VPS9D1-207ENST00000568691 TOGARAM2Q6ZUX3 1019 aa12.78□□□□□ -0.36
VPS9D1-207ENST00000568691 KCNK18Q7Z418 384 aa12.78□□□□□ -0.36
VPS9D1-207ENST00000568691 ITIH5Q86UX2 942 aa12.78□□□□□ -0.36
VPS9D1-207ENST00000568691 LRRTM3Q86VH5 581 aa12.78□□□□□ -0.36
VPS9D1-207ENST00000568691 CCDC65Q8IXS2 484 aa12.78□□□□□ -0.36
VPS9D1-207ENST00000568691 OSCP1Q8WVF1 389 aa12.78□□□□□ -0.36
VPS9D1-207ENST00000568691 DNAJC19Q96DA6 116 aa12.78□□□□□ -0.36
VPS9D1-207ENST00000568691 MRFAP1L1Q96HT8 127 aa12.78□□□□□ -0.36
VPS9D1-207ENST00000568691 CCDC43Q96MW1 224 aaKnown RBP12.78□□□□□ -0.36
VPS9D1-207ENST00000568691 ACAP3Q96P50 834 aa12.78□□□□□ -0.36
VPS9D1-207ENST00000568691 NACC1Q96RE7 527 aa12.78□□□□□ -0.36
VPS9D1-207ENST00000568691 PLIN2Q99541 437 aa12.78□□□□□ -0.36
VPS9D1-207ENST00000568691 HAPLN2Q9GZV7 340 aa12.78□□□□□ -0.36
VPS9D1-207ENST00000568691 ZDHHC4Q9NPG8 344 aa12.78□□□□□ -0.36
VPS9D1-207ENST00000568691 HSFX1Q9UBD0 423 aa12.78□□□□□ -0.36
VPS9D1-207ENST00000568691 MGAQ8IWI9 3026 aa12.78□□□□□ -0.36
VPS9D1-207ENST00000568691 PTPRQQ9UMZ3 2332 aa12.78□□□□□ -0.36
VPS9D1-207ENST00000568691 DENND4CQ5VZ89 1909 aa12.78□□□□□ -0.36
VPS9D1-207ENST00000568691 ATMQ13315 3056 aa12.77□□□□□ -0.37
VPS9D1-207ENST00000568691 BICDL2A1A5D9 508 aa12.77□□□□□ -0.37
VPS9D1-207ENST00000568691 PPP1R3GB7ZBB8 358 aa12.77□□□□□ -0.37
VPS9D1-207ENST00000568691 TK2O00142 265 aa12.77□□□□□ -0.37
VPS9D1-207ENST00000568691 ADAM23O75077 832 aa12.77□□□□□ -0.37
VPS9D1-207ENST00000568691 KIF20AO95235 890 aa12.77□□□□□ -0.37
VPS9D1-207ENST00000568691 ADCY5O95622 1261 aa12.77□□□□□ -0.37
VPS9D1-207ENST00000568691 MCF2P10911 925 aa12.77□□□□□ -0.37
VPS9D1-207ENST00000568691 ITPKBP27987 946 aa12.77□□□□□ -0.37
VPS9D1-207ENST00000568691 CASP1P29466 404 aa12.77□□□□□ -0.37
VPS9D1-207ENST00000568691 HOXD12P35452 270 aa12.77□□□□□ -0.37
VPS9D1-207ENST00000568691 AVPR1AP37288 418 aa12.77□□□□□ -0.37
VPS9D1-207ENST00000568691 GPR15P49685 360 aa12.77□□□□□ -0.37
VPS9D1-207ENST00000568691 EFNA5P52803 228 aa12.77□□□□□ -0.37
VPS9D1-207ENST00000568691 ZXDBP98169 803 aa12.77□□□□□ -0.37
VPS9D1-207ENST00000568691 AMPD2Q01433 879 aa12.77□□□□□ -0.37
VPS9D1-207ENST00000568691 GFPT1Q06210 699 aaPredicted RBP12.77□□□□□ -0.37
VPS9D1-207ENST00000568691 USP4Q13107 963 aa12.77□□□□□ -0.37
VPS9D1-207ENST00000568691 HNRNPDQ14103 355 aaKnown RBP12.77□□□□□ -0.37
VPS9D1-207ENST00000568691 ZNF268Q14587 947 aaPredicted RBP12.77□□□□□ -0.37
VPS9D1-207ENST00000568691 SPATA1Q5VX52 437 aa12.77□□□□□ -0.37
VPS9D1-207ENST00000568691 OVOS1Q6IE37 1185 aa12.77□□□□□ -0.37
VPS9D1-207ENST00000568691 TMPRSS7Q7RTY8 843 aa12.77□□□□□ -0.37
VPS9D1-207ENST00000568691 GLRX5Q86SX6 157 aa12.77□□□□□ -0.37
VPS9D1-207ENST00000568691 MON1AQ86VX9 555 aa12.77□□□□□ -0.37
VPS9D1-207ENST00000568691 GPBP1Q86WP2 473 aa12.77□□□□□ -0.37
VPS9D1-207ENST00000568691 TTC30AQ86WT1 665 aa12.77□□□□□ -0.37
VPS9D1-207ENST00000568691 SLC41A1Q8IVJ1 513 aa12.77□□□□□ -0.37
VPS9D1-207ENST00000568691 NAXDQ8IW45 347 aa12.77□□□□□ -0.37
VPS9D1-207ENST00000568691 SCUBE3Q8IX30 993 aa12.77□□□□□ -0.37
VPS9D1-207ENST00000568691 DAW1Q8N136 415 aa12.77□□□□□ -0.37
VPS9D1-207ENST00000568691 CPA6Q8N4T0 437 aa12.77□□□□□ -0.37
VPS9D1-207ENST00000568691 ALLCQ8N6M5 410 aa12.77□□□□□ -0.37
VPS9D1-207ENST00000568691 IL17RCQ8NAC3 791 aa12.77□□□□□ -0.37
VPS9D1-207ENST00000568691 DHTKD1Q96HY7 919 aaPredicted RBP12.77□□□□□ -0.37
VPS9D1-207ENST00000568691 CYP2S1Q96SQ9 504 aa12.77□□□□□ -0.37
VPS9D1-207ENST00000568691 SEPT5Q99719 369 aaPredicted RBP12.77□□□□□ -0.37
VPS9D1-207ENST00000568691 TIPINQ9BVW5 301 aa12.77□□□□□ -0.37
VPS9D1-207ENST00000568691 OXCT2Q9BYC2 517 aaPredicted RBP12.77□□□□□ -0.37
VPS9D1-207ENST00000568691 KIF9Q9HAQ2 790 aa12.77□□□□□ -0.37
VPS9D1-207ENST00000568691 POLMQ9NP87 494 aaPredicted RBP12.77□□□□□ -0.37
VPS9D1-207ENST00000568691 DUS2Q9NX74 493 aaKnown RBP12.77□□□□□ -0.37
VPS9D1-207ENST00000568691 PLXND1Q9Y4D7 1925 aa12.77□□□□□ -0.37
VPS9D1-207ENST00000568691 TSC2P49815 1807 aa12.76□□□□□ -0.37
VPS9D1-207ENST00000568691 OBSL1O75147 1896 aa12.76□□□□□ -0.37
VPS9D1-207ENST00000568691 SHROOM3Q8TF72 1996 aa12.76□□□□□ -0.37
VPS9D1-207ENST00000568691 TRABD2BA6NFA1 517 aa12.76□□□□□ -0.37
VPS9D1-207ENST00000568691 CBFA2T2O43439 604 aa12.76□□□□□ -0.37
VPS9D1-207ENST00000568691 ZNF18P17022 549 aa12.76□□□□□ -0.37
VPS9D1-207ENST00000568691 TYMPP19971 482 aa12.76□□□□□ -0.37
VPS9D1-207ENST00000568691 ZNF75DP51815 510 aa12.76□□□□□ -0.37
VPS9D1-207ENST00000568691 BFSP1Q12934 665 aa12.76□□□□□ -0.37
VPS9D1-207ENST00000568691 DHX8Q14562 1220 aaKnown RBP12.76□□□□□ -0.37
VPS9D1-207ENST00000568691 ZC2HC1CQ53FD0 456 aaPredicted RBP12.76□□□□□ -0.37
VPS9D1-207ENST00000568691 SPDYCQ5MJ68 293 aa12.76□□□□□ -0.37
VPS9D1-207ENST00000568691 ISM2Q6H9L7 571 aa12.76□□□□□ -0.37
VPS9D1-207ENST00000568691 EFCAB13Q8IY85 973 aa12.76□□□□□ -0.37
VPS9D1-207ENST00000568691 GUF1Q8N442 669 aaKnown RBP12.76□□□□□ -0.37
VPS9D1-207ENST00000568691 TRIM5Q9C035 493 aa12.76□□□□□ -0.37
VPS9D1-207ENST00000568691 ZCWPW1Q9H0M4 648 aa12.76□□□□□ -0.37
VPS9D1-207ENST00000568691 PRORYQ9H606 182 aa12.76□□□□□ -0.37
VPS9D1-207ENST00000568691 ARHGAP28Q9P2N2 729 aa12.76□□□□□ -0.37
VPS9D1-207ENST00000568691 SEL1LQ9UBV2 794 aa12.76□□□□□ -0.37
VPS9D1-207ENST00000568691 ODF2LQ9ULJ1 636 aa12.76□□□□□ -0.37
VPS9D1-207ENST00000568691 NFE2L3Q9Y4A8 694 aa12.76□□□□□ -0.37
VPS9D1-207ENST00000568691 UBE4BO95155 1302 aa12.76□□□□□ -0.37
VPS9D1-207ENST00000568691 GOLGA6L6A8MZA4 724 aa12.75□□□□□ -0.37
VPS9D1-207ENST00000568691 E9PMD0 336 aa12.75□□□□□ -0.37
VPS9D1-207ENST00000568691 K7ERI5 159 aa12.75□□□□□ -0.37
VPS9D1-207ENST00000568691 MAP3K13O43283 966 aa12.75□□□□□ -0.37
VPS9D1-207ENST00000568691 TPM3P06753 285 aa12.75□□□□□ -0.37
VPS9D1-207ENST00000568691 CXCL8P10145 99 aa12.75□□□□□ -0.37
VPS9D1-207ENST00000568691 HAPLN1P10915 354 aaPredicted RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms