RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 EOMESO95936 686 aa7.41□□□□□ -1.22
SMG1-215ENST00000568239 FAM200BP0CF97 657 aa7.41□□□□□ -1.22
SMG1-215ENST00000568239 PCSK1P29120 753 aa7.41□□□□□ -1.22
SMG1-215ENST00000568239 PLA2G4AP47712 749 aa7.41□□□□□ -1.22
SMG1-215ENST00000568239 PLTPP55058 493 aa7.41□□□□□ -1.22
SMG1-215ENST00000568239 GSCP56915 257 aaPredicted RBP7.41□□□□□ -1.22
SMG1-215ENST00000568239 BCAR1P56945 870 aa7.41□□□□□ -1.22
SMG1-215ENST00000568239 CUL1Q13616 776 aa7.41□□□□□ -1.22
SMG1-215ENST00000568239 HSP90B2PQ58FF3 399 aa7.41□□□□□ -1.22
SMG1-215ENST00000568239 TFDP3Q5H9I0 405 aa7.41□□□□□ -1.22
SMG1-215ENST00000568239 NOMO2Q5JPE7 1267 aa7.41□□□□□ -1.22
SMG1-215ENST00000568239 TRNP1Q6NT89 227 aa7.41□□□□□ -1.22
SMG1-215ENST00000568239 SPOCD1Q6ZMY3 1216 aa7.41□□□□□ -1.22
SMG1-215ENST00000568239 GSTA5Q7RTV2 222 aa7.41□□□□□ -1.22
SMG1-215ENST00000568239 LIMS2Q7Z4I7 341 aa7.41□□□□□ -1.22
SMG1-215ENST00000568239 DEFB128Q7Z7B8 93 aa7.41□□□□□ -1.22
SMG1-215ENST00000568239 SIX6OS1Q8N1H7 587 aa7.41□□□□□ -1.22
SMG1-215ENST00000568239 FAM172AQ8WUF8 416 aa7.41□□□□□ -1.22
SMG1-215ENST00000568239 LINC01599Q8WXQ3 324 aa7.41□□□□□ -1.22
SMG1-215ENST00000568239 KCNK16Q96T55 309 aa7.41□□□□□ -1.22
SMG1-215ENST00000568239 HNRNPABQ99729 332 aaKnown RBP7.41□□□□□ -1.22
SMG1-215ENST00000568239 CNPY3Q9BT09 278 aa7.41□□□□□ -1.22
SMG1-215ENST00000568239 FTHL17Q9BXU8 183 aa7.41□□□□□ -1.22
SMG1-215ENST00000568239 DUSP16Q9BY84 665 aa7.41□□□□□ -1.22
SMG1-215ENST00000568239 ACBD3Q9H3P7 528 aa7.41□□□□□ -1.22
SMG1-215ENST00000568239 CRTAC1Q9NQ79 661 aa7.41□□□□□ -1.22
SMG1-215ENST00000568239 PAK6Q9NQU5 681 aaPredicted RBP7.41□□□□□ -1.22
SMG1-215ENST00000568239 COX16Q9P0S2 106 aa7.41□□□□□ -1.22
SMG1-215ENST00000568239 LAMA2P24043 3122 aaKnown RBP7.41□□□□□ -1.22
SMG1-215ENST00000568239 POLR3GO15318 223 aaPredicted RBP7.41□□□□□ -1.22
SMG1-215ENST00000568239 DDHD2O94830 711 aa7.41□□□□□ -1.22
SMG1-215ENST00000568239 CD48P09326 243 aa7.41□□□□□ -1.22
SMG1-215ENST00000568239 ACADSBP45954 432 aa7.41□□□□□ -1.22
SMG1-215ENST00000568239 NDUFV1P49821 464 aa7.41□□□□□ -1.22
SMG1-215ENST00000568239 CDK7P50613 346 aa7.41□□□□□ -1.22
SMG1-215ENST00000568239 SLC25A11Q02978 314 aaKnown RBP7.41□□□□□ -1.22
SMG1-215ENST00000568239 CCDC14Q49A88 953 aa7.41□□□□□ -1.22
SMG1-215ENST00000568239 CLLU1OSQ5K130 101 aa7.41□□□□□ -1.22
SMG1-215ENST00000568239 LRRC38Q5VT99 294 aa7.41□□□□□ -1.22
SMG1-215ENST00000568239 PAQR9Q6ZVX9 377 aa7.41□□□□□ -1.22
SMG1-215ENST00000568239 STK32AQ8WU08 396 aa7.41□□□□□ -1.22
SMG1-215ENST00000568239 HSFY1Q96LI6 401 aa7.41□□□□□ -1.22
SMG1-215ENST00000568239 RHOBTB2Q9BYZ6 727 aa7.41□□□□□ -1.22
SMG1-215ENST00000568239 NEUROG2Q9H2A3 272 aa7.41□□□□□ -1.22
SMG1-215ENST00000568239 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.41□□□□□ -1.22
SMG1-215ENST00000568239 SAE1Q9UBE0 346 aaPredicted RBP7.41□□□□□ -1.22
SMG1-215ENST00000568239 ASIC3Q9UHC3 531 aa7.41□□□□□ -1.22
SMG1-215ENST00000568239 PCYOX1Q9UHG3 505 aa7.41□□□□□ -1.22
SMG1-215ENST00000568239 PCDHB7Q9Y5E2 793 aa7.41□□□□□ -1.22
SMG1-215ENST00000568239 FAM187AA6NFU0 413 aa7.4□□□□□ -1.22
SMG1-215ENST00000568239 XPO1O14980 1071 aaKnown RBP7.4□□□□□ -1.22
SMG1-215ENST00000568239 B4GALT3O60512 393 aa7.4□□□□□ -1.22
SMG1-215ENST00000568239 KDELR1P24390 212 aa7.4□□□□□ -1.22
SMG1-215ENST00000568239 TNFRSF8P28908 595 aa7.4□□□□□ -1.22
SMG1-215ENST00000568239 CDH6P55285 790 aa7.4□□□□□ -1.22
SMG1-215ENST00000568239 KRT17Q04695 432 aa7.4□□□□□ -1.22
SMG1-215ENST00000568239 IFRD2Q12894 506 aaPredicted RBP7.4□□□□□ -1.22
SMG1-215ENST00000568239 OVOS1Q6IE37 1185 aa7.4□□□□□ -1.22
SMG1-215ENST00000568239 DCLRE1AQ6PJP8 1040 aa7.4□□□□□ -1.22
SMG1-215ENST00000568239 CLEC20AQ6ZU45 233 aa7.4□□□□□ -1.22
SMG1-215ENST00000568239 POLNQ7Z5Q5 900 aa7.4□□□□□ -1.22
SMG1-215ENST00000568239 CEP57Q86XR8 500 aa7.4□□□□□ -1.22
SMG1-215ENST00000568239 ZDHHC17Q8IUH5 632 aa7.4□□□□□ -1.22
SMG1-215ENST00000568239 RSPH1Q8WYR4 309 aa7.4□□□□□ -1.22
SMG1-215ENST00000568239 SEPT8Q92599 483 aa7.4□□□□□ -1.22
SMG1-215ENST00000568239 RUFY1Q96T51 708 aa7.4□□□□□ -1.22
SMG1-215ENST00000568239 MAK16Q9BXY0 300 aaKnown RBP7.4□□□□□ -1.22
SMG1-215ENST00000568239 DCLK3Q9C098 648 aa7.4□□□□□ -1.22
SMG1-215ENST00000568239 HIPK3Q9H422 1215 aa7.4□□□□□ -1.22
SMG1-215ENST00000568239 LRRC19Q9H756 370 aa7.4□□□□□ -1.22
SMG1-215ENST00000568239 FAM114A2Q9NRY5 505 aa7.4□□□□□ -1.22
SMG1-215ENST00000568239 TBC1D13Q9NVG8 400 aa7.4□□□□□ -1.22
SMG1-215ENST00000568239 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.4□□□□□ -1.22
SMG1-215ENST00000568239 DNAJB4Q9UDY4 337 aa7.4□□□□□ -1.22
SMG1-215ENST00000568239 CDH9Q9ULB4 789 aa7.4□□□□□ -1.22
SMG1-215ENST00000568239 ZNF148Q9UQR1 794 aa7.4□□□□□ -1.22
SMG1-215ENST00000568239 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.4□□□□□ -1.22
SMG1-215ENST00000568239 GOLGA6BA6NDN3 693 aa7.4□□□□□ -1.23
SMG1-215ENST00000568239 DCDC2CA8MYV0 355 aa7.4□□□□□ -1.23
SMG1-215ENST00000568239 CST8O60676 142 aa7.4□□□□□ -1.23
SMG1-215ENST00000568239 TADA2AO75478 443 aa7.4□□□□□ -1.23
SMG1-215ENST00000568239 UPP2O95045 317 aa7.4□□□□□ -1.23
SMG1-215ENST00000568239 TRUB2O95900 331 aaKnown RBP7.4□□□□□ -1.23
SMG1-215ENST00000568239 GAS8O95995 478 aa7.4□□□□□ -1.23
SMG1-215ENST00000568239 TFE3P19532 575 aaPredicted RBP7.4□□□□□ -1.23
SMG1-215ENST00000568239 BDNFP23560 247 aa7.4□□□□□ -1.23
SMG1-215ENST00000568239 CDKN2BP42772 138 aa7.4□□□□□ -1.23
SMG1-215ENST00000568239 PTGIRP43119 386 aa7.4□□□□□ -1.23
SMG1-215ENST00000568239 FNTAP49354 379 aa7.4□□□□□ -1.23
SMG1-215ENST00000568239 GATMP50440 423 aa7.4□□□□□ -1.23
SMG1-215ENST00000568239 TKTL1P51854 596 aa7.4□□□□□ -1.23
SMG1-215ENST00000568239 ATXN1P54253 815 aaKnown RBP7.4□□□□□ -1.23
SMG1-215ENST00000568239 YWHAHQ04917 246 aaPredicted RBP7.4□□□□□ -1.23
SMG1-215ENST00000568239 KLF1Q13351 362 aaPredicted RBP7.4□□□□□ -1.23
SMG1-215ENST00000568239 KRT81Q14533 505 aa7.4□□□□□ -1.23
SMG1-215ENST00000568239 ACAP1Q15027 740 aa7.4□□□□□ -1.23
SMG1-215ENST00000568239 CYP1B1Q16678 543 aa7.4□□□□□ -1.23
SMG1-215ENST00000568239 DCAF6Q58WW2 860 aa7.4□□□□□ -1.23
SMG1-215ENST00000568239 PPP6R3Q5H9R7 873 aaPredicted RBP7.4□□□□□ -1.23
SMG1-215ENST00000568239 FAM35AQ86V20 835 aa7.4□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms